KEGG   Castanea sativa (European chestnut): 142643168
Entry
142643168         CDS       T11266                                 
Name
(RefSeq) cullin-4
  KO
K10609  cullin 4
Organism
csaa  Castanea sativa (European chestnut)
Pathway
csaa03420  Nucleotide excision repair
csaa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    142643168
  09124 Replication and repair
   03420 Nucleotide excision repair
    142643168
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csaa04121]
    142643168
   03400 DNA repair and recombination proteins [BR:csaa03400]
    142643168
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csaa04147]
    142643168
Ubiquitin system [BR:csaa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     142643168
DNA repair and recombination proteins [BR:csaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      142643168
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      142643168
Exosome [BR:csaa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   142643168
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 142643168
NCBI-ProteinID: XP_075673830
LinkDB
Position
7
AA seq 834 aa
MSLPTKRSATSTTSNINNNNSSSSSSNPNPTSPPPFSAMKKAKSQAAALDPKNGLHHQDF
NSNSNNNDVVFDPSSMSVDDDFKPHDSSAPSLSPTPPRSVAANLARKKSQPPQPTKKLVI
KLLKAKPTLPANFEEDTWAKLKSAISAIFLKQPDPIDSEILYQAVNDLCLHKLGGNLYQR
IEKECEAHISEALQSLFGQSPDLVVFLSLVERCWQDLCDQMLLIRGIALYLDRTYVKQTP
NVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIQSERLGEAVDRTLLNHLLKMFTALG
IYAESFEKPFLECTSEFYAAEGMKFMQQSDVPDYLKHVETRLHEEHERCVLYLDACTRKP
LIATAEKQLLERHISAILDKGFMMLMDGHRIEDLQRMYSLFSRVNALESLRQALSSYIRR
TGQGIVMDEEKDKDMVSSLLEFKASLDTIWEESYSKNDAFCNTIKDAFEHLINLRQNRPA
ELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKS
ASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIELSV
HVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKG
KKELAVSLFQTVVLMLFNDAERLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKMPKG
RDVEDDDSFVFNDVFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMK
TRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgtctctccccaccaaacgctcagccacatccaccacctccaacatcaacaacaacaac
tcttcttcttcttcttccaatcccaaccccacatctcctcctcccttctccgccatgaaa
aaggccaaatcccaagccgcagctctcgaccccaaaaacggtctccaccaccaagacttc
aacagcaacagcaacaacaacgatgtcgttttcgacccctcttccatgtccgtcgacgac
gatttcaagcctcacgactcctccgccccttccctttccccaactccgcctcgctccgtc
gccgccaatttggccagaaagaaatcccagccgcctcagcccactaagaagcttgtcatc
aagctcctcaaagccaaaccaacactgcctgcaaattttgaagaggatacatgggcaaag
ctgaaatctgctatatctgctatatttttaaagcagcccgatcctattgactcagagata
ctttatcaggctgttaatgacctttgtctacacaaattggggggaaatctttatcaacgg
attgagaaggagtgtgaagcgcacatatctgaagcattgcaatccttgtttggccaaagc
ccagatttggtggtttttctctcacttgtcgagagatgctggcaggatctttgtgaccaa
atgttgttgattcgtggtatcgccttgtatctagatagaacatatgtaaagcaaacacct
aatgtgcgatcattgtgggatatgggattgcagcttttccgcaaacatctttcattatct
ccagaagttgagcacaaaactgtcacaggccttttaagaatgattcagagcgaaagatta
ggtgaagcagtggataggactctccttaaccatctcttgaagatgtttactgcattagga
atttacgcagaaagctttgaaaagccatttcttgagtgcacgtctgagttttatgctgct
gaaggcatgaaattcatgcagcaatcagatgttccagattatctgaagcatgtagagaca
aggttgcacgaggaacatgaaagatgtgtactctacctggatgcttgtacaagaaaacca
ctaatagcaactgcagaaaagcaactccttgaacgccacatatctgccattcttgataag
ggtttcatgatgctaatggatgggcaccgtattgaggacctccagaggatgtattcactg
ttttcaagggtcaatgcgcttgaatcacttaggcaagcccttagctcatacatccgcaga
actgggcagggcattgtcatggatgaagagaaagacaaagatatggtttcatccctttta
gaatttaaggcttcgcttgatacaatatgggaagaaagctattccaagaatgatgcattt
tgcaacaccattaaggatgcatttgagcatctcatcaatcttcgtcagaaccgacctgct
gagctgattgcgaaatttctggatgaaaagcttcgtgctgggaataagggtacttctgag
gaagaattggagggtactcttgataaagttttggttttattcaggtttattcagggcaag
gacgtgtttgaagcattttataagaaggatcttgcaaaaaggctgcttttgggaaagagc
gcttctattgatgcggagaaatccatgatctctaagctaaagacagagtgtggcagccaa
tttacaaacaaacttgaaggaatgttcaaagacattgaattatcaaaagaaataaatgaa
tccttcaaacaatcatcccaggccaggacaaaactcccatccgggattgagttgagtgta
catgttttaacaacagggtactggccaacatatccgcccatggatgttagacttcctcat
gaattgaatgtctaccaggacattttcaaggagttctacttgagcaagtacagtgggagg
cgcttaatgtggcaaaattcgttaggtcattgtgtgttaaaagctgaatttcctaaaggt
aaaaaggagctggcagtttctctgtttcagactgttgttttgatgctctttaatgatgct
gagaggctaagctttcaagatattaaggactccactggaattgaggataaggaactaagg
aggactttgcagtcccttgcgtgtggaaaagttcgagtcctacaaaagatgcccaagggt
agggacgtagaggatgatgattcatttgtgttcaatgatgtatttactgctccactttac
cgtataaaggtaaatgcaatacagatgaaggaaacagtggaggagaatacaagcaccact
gaacgagtttttcaggaccgtcaatatcaggttgatgctgctattgtacgaataatgaag
acaagaaaagtgctcagtcacacacttctgataactgaactcttccaacagctcaaattt
ccaataaagccagctgatttgaagaaacgtattgaaagccttatcgacagggagtatcta
gagcgtgacaagaacaacccgcagatatacaattacttggcataa

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