Castanea sativa (European chestnut): 142643333 Help Entry 142643333         CDS       T11266                                  Name (RefSeq) E3 ubiquitin-protein ligase UPL3   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism csaa  Castanea sativa (European chestnut) Pathway csaa04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:csaa00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     142643333  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:csaa04121]     142643333 Enzymes [BR:csaa01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      142643333 Ubiquitin system [BR:csaa04121]  Ubiquitin ligases (E3)   HECT type E3    142643333 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HECT TPR_TRIP12_N ARM_ARMC5 Arm HEAT_EZ TFIIA Motif Other DBs NCBI-GeneID:  142643333 NCBI-ProteinID:  XP_075674013 LinkDB All DBs Position 7:41667970..41679677 Genome browser AA seq 1921 aa AA seqDB search METRSRKRAEATSAAPTTNNSSSSTTTATRSSKRARLSTTTTTTPTTPVAAAAAAATAAT SSQSSISTRSRSAAKTTTAAAAASNNMDSVTESSGSRRRGGGGGGNSRGGSERDNSDKGK EKEHEIRVRDRERERESRENERSLGLNMDGAGAADDEDNDSEGGVGILHQNLTSASSALQ GLLRKLGAGLDDLLPSSAMGSGSGSHQSGRLKKILSGLRADGEEGRQVEALTQLCDMLSI GTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSC FCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTA ANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSPDKLDELCN HGLVTQAASLISTSNAGGGQASLSAPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKD ILAGAGISTNASVSPALSRPAEQIFEIVNLANELLPPLPQGTISLPASSNLFMKGPVVKK SSVGSSGKQEDTNGNAPEVSAREKLLNDQPELLQQFGMDLLPILIQIYGSSVNGPVRHKC LSVIGKLMYFSNAEMIQSLLSTTNISSFLAGVLAWKDPHVLVPALQIAEILMEKLPGTFS KMFVREGVVHAVDQLILAGNPNTGPAQASPIEKDNDSAPGASSRSRRYRRRSGNSNPDGN ASEESKNPGSVNIGSPPSSVEIPSVNSSLRMAVSSCAKAFKDKYFPSEPGSAEAGVTDDL LHLKNLCMKLNAGVDDQKTKAKGKSKASGSRLADNSANKEEYLLGVLTEMLGELSKGDGV STFEFIGSGVVAALLNYFSCGYFSKERISEANLPKLRQQALKRFKSFIAVALPSSIDEEG ATPMTVLVQKLQNALSSLERFPVVLSHSSRSSGGSARLSSGLSALSQPFKLRLCRAQGEK SLRDYSSNVVLIDPLASLAAVEEFLWPRVQRGESGQKSSVSAGNSESGTTPTGAGASSPS TSTPAAATRRHSTRSRSSVNIGDASKKDPAQEKSTSSSKGKGKAVLRPTQEEGRGPQTRN AARRRAALDKDAQMKPVNGDSTSEDEELDISPVEIDDALVIEDDDISDDEDDDHEDVLRD DSLPVCMPDKVHDVKLGDSAEDSAVAPAASDSQTNPVSGSSSRAATARGSDSADFRTGNS YGSRGAMSFAAAAMAGLGSANGRGLRGGRDRQGRPLYGSSNDPPKLIFTAGGKQLNRHLT IYQAVQRQLVLDEDDDDRYAGSDLISSDGSRLWSDIYTITYQRSESQTDRASVGGSSSHT TLKSTKPGSTSGSNSDAQLHRMSLLDSILQGELPCDLEKTNPTYNIMALLRVLEGLNQLA PRLRAQIVSDSFAEGKILNLDELSTTGARVPSEEFVNSKLTPKLARQIQDALALCSGSLP SWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQQQQGADGHGSANEREVRVGRLQ RQKVRVSRNRILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKAGL GMWRTNSSSEKHSMEIDGDQHKNGKTNSADGDLVNAPLGLFPRPWPPNADAADGSQFSKA IEYFRLVGRVMAKALQDGRLLDLPLSTAFYKLVLGQELDLHDILTYDAELGKHLQELHVL VCRKQNLELTSGDSSEAVADLRLRGTSIEDLCLDFTLPGYPDYILKPGDENVDIYNLEEY ISLVVDATVKAGIMRQMEAFRAGFNQVFDISSLQIFTPHELDYLLCGRRELWEAETLADH IKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKH SSTAANTASNGTGLSESADDDLPSVMTCANYLKLPPYSTKDVMYKKLVYAISEGQGSFDL S NT seq 5766 nt NT seq  +upstreamnt  +downstreamnt atggaaactcgtagccggaagcgggcggaggccacctcagctgcccctactactaacaac tcttcttcttccaccaccaccgccacccgctcttccaaacgcgctcgtctctcaacaacc accacaacaacaccaacaacacccgtcgccgccgccgccgctgccgccaccgccgccacg tcatcgcaatcttcgatctcaacacgctcacgttctgctgcgaaaactactactgctgct gctgctgcttctaataacatggattccgtgactgaatcatccggctctcgccgccgcggc gggggtggtggggggaacagtcgaggaggctctgagagggataattcggataaaggcaaa gagaaagagcatgagattagggttagggatagggagagggagagggaaagtagggagaat gaaaggagcttagggttgaatatggatggtgcgggcgccgccgacgatgaggacaacgat agcgaaggcggtgttgggattctgcaccagaatttgacatcggcgagcagtgctttacag ggtttgttgaggaagctcggtgctgggctcgatgatctgctgccatcgtcggctatgggg tctgggtccgggtcgcaccagagcgggcggttgaagaagattctgtcgggtttgagagct gatggtgaagaagggaggcaggtcgaggccttgactcagctctgtgacatgttgtcaatc gggaccgaggagtctttgagcactttctccgttgattccttcgtgcccgtgctcgtcggg ttgctgaatcacgagagcaatcccgatatcatgctcctcgctgccagggctctcactcat ctgtgtgatgtgttgccttcttcttgcgcggccgtcgtgcattatggtgcggtttcgtgc ttttgcgccaggcttctcacgatagagtacatggacttggctgaacagtccctgcaagct ctgaagaagatatctcaggaacacccaactgcctgtttgcgagctggtgcacttatggca gtgctttcgtatctcgatttcttctccactggagtgcagcgagtggcattgtctactgct gcaaatatgtgcaagaagctcccttcagatgcagctgactttgtgatggaagctgtcccc ttgttgactaaccttcttcagtatcatgactcaaaggtgttggagcatgcttctgtttgt ttgactcgaattgctgaagcatttgcatcgtctccggataaattagacgaactttgcaat catggtttggttacacaagctgcctcacttatttccaccagcaatgctggaggtggacag gcctctctaagtgctcctacatacacaggtttaattcggcttctttccacttgtgctagt ggctctcctttaggagccaaaactttacttctcctggggatcagtggcatccttaaagat attctagctggtgcaggcatatcaactaatgcatcggtttcacctgctttaagtaggcca gcagaacagatttttgagattgtcaatctagcaaatgagcttctccctccattgccacaa ggaaccatctccctccctgctagctccaatttatttatgaaaggacctgttgttaagaag tcctctgtcggcagttctgggaaacaggaagacacaaatgggaatgctcccgaggtttca gctcgtgagaaattattaaatgatcagcccgagcttcttcagcaatttggaatggatctc ctgcctattctgatacaaatatatggttcaagtgtgaacggccctgttcgtcacaaatgt ctttcagttattggaaaattgatgtacttcagtaatgcagagatgattcagtctttatta agtacaacaaacatatcgagtttcttagctggtgttttagcatggaaagatccgcatgtc ttggttcctgctctccaaattgctgaaattcttatggaaaagcttcctgggactttctcc aagatgtttgttagagaaggtgtggttcatgctgtggaccaacttattttagctggtaat ccaaatacaggtcctgcacaagcatctcccatcgagaaggataatgattctgcccctggt gcatcatcacgctctaggcgttataggcgacggagtgggaactccaacccagatggaaat gcttcagaggaatccaagaatcctggttcagtaaatattggatctcccccaagctcggtg gaaattccttctgtcaattctagtcttcgtatggcagtcagttcatgtgctaaagccttt aaagacaagtacttcccttcagaacctggttctgctgaagctggagtcacagacgatctt ttacatttaaagaatctttgcatgaagttgaatgccggtgttgatgaccaaaagaccaaa gcaaagggaaagtctaaagcttctgggtctcgcctggctgataattctgcgaataaggaa gagtatctgctgggggttctaactgagatgctaggagagctaagcaaaggggatggtgtg tccacttttgagtttattggcagtggtgttgttgctgctttgctgaactacttttcttgt ggctacttttccaaggagagaatttcagaagctaacctgcccaagcttcgccaacaagca cttaaaagattcaagtcctttattgctgttgcactaccttccagtattgatgaggagggt gcgactcccatgactgtattggttcagaagcttcaaaatgctttgtcctccttggagcgt ttccctgttgtgttgagccattcatctaggtcatctggtggaagtgcacgcctctcctct gggctgagtgcattgtctcagccttttaagctgcgcctttgtagagcccaaggtgaaaaa tcgctccgtgactattcatctaacgttgtactgattgacccattagcaagtttagcagct gttgaggaatttctttggccccgagtccagagaggtgaatctggtcagaaatcctcagta tctgctgggaattctgagtctggaactacacctacaggagctggtgcttcttccccatct acttctactcctgcagctgccactcgtcgtcattccactagatcaagatcatctgttaat ataggagacgcttctaaaaaggatccggcacaagagaaaagcacaagttcatcaaagggg aagggtaaagctgttttgagacctactcaagaggaaggtagaggacctcaaacaagaaat gccgcccgtagaagagcagctcttgataaagatgcccaaatgaaacctgtaaatggggac tctacttctgaggatgaggaattggatatatctcctgttgagattgacgatgctttggtg attgaagatgatgatatctcagatgatgaggatgatgaccatgaagatgttctaagagat gattctcttcctgtttgcatgcctgacaaagtacatgatgtaaaattgggcgactctgca gaggatagtgctgttgctccagcagcaagtgatagccagactaatccggtgtctggctct agtagcagagctgctacagctaggggctctgattctgctgattttaggactggaaattct tatggttcaaggggtgctatgtcatttgctgctgctgccatggctggtcttggatctgct aatggtagaggtcttaggggaggcagagataggcaaggacgccctctatatggaagctcc aatgatcctccaaaattaatctttactgcaggtgggaagcagcttaataggcatttgact atttatcaagctgttcagcggcagcttgtattggatgaggatgatgatgacaggtatgct ggcagtgatctcatatctagtgatggaagcaggctgtggagtgacatttacactattacc tatcagaggtcagaaagccaaactgatagggcttctgttggaggttcaagttctcatact acattaaaatctaccaagcctggttctacctctggttctaactctgatgcccaattgcat cgaatgtcccttctagatagtatcttgcagggagaacttccttgtgatctggaaaaaact aatcccacttataatataatggcacttttgcgtgtattagagggtttgaaccagcttgca cctcgtttaagagcccagatagtttctgacagttttgctgaggggaaaatcttgaatctg gatgagctgagcacgactggtgctagggttccttctgaggaatttgttaacagcaagctt actcccaaattagctcgacaaattcaagatgcacttgcactgtgcagtggtagtcttcct tcatggtgctaccagttgacaaaagcatgtcccttcttgtttccttttgagacccggcga cagtacttctattcaactgcttttgggttatctcgggctttgtatcgtctccagcagcag caaggtgctgatggtcatggatcagcaaatgaaagagaggtgagggttgggagattgcag cgccagaaggtccgtgtctcgagaaaccgtattttggattctgctgctaaagtaatggag atgtattctagccaaaaggctgtgcttgaggtagaatattttggtgaagttggcactgga ttgggtcccacccttgaattctacacacttttaagtcatgacctacaaaaagctggactt ggaatgtggagaacaaattcttcctcagagaagcattcaatggaaattgatggagatcaa cataaaaatgggaaaaccaatagtgctgatggagatcttgtcaacgctcctcttgggttg tttccccgtccttggcctccaaatgccgatgctgctgatggtagtcagttttcaaaagcc attgagtatttccggttggtaggacgtgtgatggccaaagctcttcaagatggacggcta ctggacctgccactatcaacagcattttacaagctcgtgcttggtcaagaacttgatttg catgatattcttacttatgatgctgagttaggcaagcatttgcaagaattgcatgtcctt gtttgccggaaacaaaatctagaattgactagtggtgatagtagtgaggcagttgcggat ttacgtcttcgtggcacttcaattgaagatctctgcttggattttacacttcctggttat ccagactacattttgaaacctggagatgaaaatgttgatatttataacttggaggagtat atatcattggtagttgatgcgactgttaaggctggaataatgcggcaaatggaagcattt agagcaggtttcaatcaggtgtttgacatctcgtctctacaaatatttactccacatgaa ttggactacttgctttgtggtcgcagagagttatgggaggctgagacacttgctgatcat ataaaatttgatcatggatacactgccaagagcccggcaatagttaatttactggagatt atgggagaattcacaccagagcagcagcgggccttctgccagtttgttactggtgcacct aggcttccacctggtggtctggctgtactgaatccaaaactgacgattgtgagaaagcat tcttcaaccgcagctaacacagcatctaatggtactgggctttcagaatcagcagatgat gacttaccaagtgtcatgacatgtgcaaactacttgaaacttcctccatactccacaaag gatgtaatgtacaagaaattagtttatgcaatcagtgaagggcagggatctttcgatttg tcatga

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