Castanea sativa (European chestnut): 142643607
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Entry
142643607 CDS
T11266
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
csaa
Castanea sativa (European chestnut)
Pathway
csaa03440
Homologous recombination
csaa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142643607
03460 Fanconi anemia pathway
142643607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csaa04131
]
142643607
04121 Ubiquitin system [BR:
csaa04121
]
142643607
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142643607
Membrane trafficking [BR:
csaa04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
142643607
Ubiquitin system [BR:
csaa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
142643607
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
142643607
RecA family proteins
142643607
FA (Fanconi anemia) pathway
Other FA pathway factors
142643607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
RecA_N
AAA_25
HHH_5
ATPase
AAA_22
DnaB_C
Motif
Other DBs
NCBI-GeneID:
142643607
NCBI-ProteinID:
XP_075674413
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All DBs
Position
7:complement(3154396..3158834)
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AA seq
344 aa
AA seq
DB search
MEQQRKQKMAVEEQQQHEQVEEMQQGPTPVEQLQAAGIASIDVKKLKDAGLCTVESVAFS
PRKELLQIKGISDAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSRELDKVLEG
GIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIA
ERFGLDGPDVLDNVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGR
GELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAMFAGPQIKPIGGNIMAHA
STTRLALRKGRGDERICKVISSPCLAEAEARFQIAAEGVTDVKD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaaagaaagcagaagatggcagttgaggaacaacaacaacatgaacaagtc
gaagagatgcaacaaggccctaccccagtcgaacaacttcaggcggcaggcattgcttcc
attgacgttaagaagcttaaagatgcgggtctctgcactgttgaatcggttgctttctct
cccaggaaggaactccttcaaatcaaaggaattagtgacgctaaagtagacaagatcatc
gaagcagcttccaagttagtgcctttgggttttactagtgctagccaactccatgcccag
aggcttgagatcattcagataacatccgggtcaagagagcttgacaaggtattggaagga
ggaattgagacaggatctattactgagatatatggtgagtttcgatctggaaagactcag
ctgtgtcacacactgtgtgtcacttgccagcttccattagatcaaggaggtggagaggga
aaagcaatgtacatcgatgcagagggcacatttaggccacagagactcttacagatagca
gaaaggtttggactggatggtcctgatgtcttggataatgtggcttatgctagagcttat
aacactgatcatcagtcaagacttctgcttgaagcagcttcaatgatggtggaaacaagg
tttgctcttatgatagtagacagtgctactgctctctacagaacagatttctctggaagg
ggagaactttcagcccggcaaatgcatcttgcgaagtttctccggagccttcagaaatta
gcagatgagtttggtgtcgctgttgttattacaaaccaagtagtcgcacaagtggatggt
tctgcaatgtttgccggccctcaaatcaagcctattggtggtaacattatggctcatgct
tccacaacaaggctagctctgcgtaagggaagaggagatgagcgcatctgtaaagtaata
agctctccttgtttagctgaagctgaagcacggtttcagattgctgcagaaggtgttact
gatgtcaaggactga
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