Castanea sativa (European chestnut): 142643830
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Entry
142643830 CDS
T11266
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
142643830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142643830
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
142643830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Muted
HSBP1
Motif
Other DBs
NCBI-GeneID:
142643830
NCBI-ProteinID:
XP_075674664
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All DBs
Position
7:complement(18495332..18499812)
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AA seq
660 aa
AA seq
DB search
MGIRLVNEMEEGREREGGKVLSLIEKATNSTAAEVDPRLLKAIKSVVCYLDTELQLAANT
LLDLMKRDHSQVRYLTLLIIDELFMRSKLFRSILVDNLDQVLSLSVGFRRTLPLPAPPAV
ASILRSKAIEFLEKWNSSFGIHYRQLRLGFDYLKNTLKLQFPNLQANAARIQQERAERER
RSREILLKKFEMFKDNFSSIKEEIMSTIDEIGECLDIVRTNEEFTPLPPADDEYFEEFRS
SELLQIRLNTLKEGEKVHENSDNKVVFDALRELYKLLETKHLVSVQEWISFLLRVEVADN
RFRDSALKELIDIQNRLKSVKKKCEESGCALPNTANRDEEEDDFWEEGKIGSLESERSTV
PNKQDEDFSMKVTSNKFKNRTPESSKKDCNDNEILSPEGGETNLDPLRSKLLAEAPVMKW
GSFLDNWGSNRKVLANQRGLELESHWGRVDYDAVILAEKMPELNVHATLYEEQQTDIQPC
RAPLSKGGLCQRRDLRVWPFHGPIIPRDDEGKPLNQNSLKEEISLDLGIDSIEQLAKQAV
KNVRERDKEVANKREIDKKSLKHAKLARIREHNETALRDAALTSTSRSASVGEDMGVTDG
EKPSARNKKETLSSMLHKKVTPKDRIAQRLLNSWAKDSTTRQLTLGEDANYREAFPNQWQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggtattaggctagtaaatgaaatggaagaggggagagagagagaaggagggaaggtg
ttgagtctgatagagaaggcgaccaactccacagctgctgaggtggacccacgtctcctt
aaggccatcaaatccgtagtctgctatttggatacggaactccaacttgccgccaatacc
cttttggatctcatgaagcgcgaccactctcaggtaaggtacctgacactcctgataatt
gatgaactgttcatgcgttcgaagcttttcagaagcattcttgttgacaacttggatcag
gtgctgagtttgagtgttggattcagaagaactctgcctctccctgctcctcctgctgtc
gcttccattttgcgctctaaggcaattgaattcttggagaagtggaactcttcctttggg
attcattacaggcagctcagattagggtttgattaccttaaaaacaccctcaagttgcag
tttcctaatctacaggccaatgcagctcggattcagcaggagagagcagaacgggaaagg
cggtcaagagagattttgctaaagaaatttgaaatgttcaaggacaatttctcatctatt
aaggaagagatcatgtctaccattgacgagattggggaatgcttagacatagtccgtaca
aatgaggagtttacgcctctgcctcctgcagatgatgaatatttcgaagagtttcgttct
tctgaactgctgcaaatccgtctcaatactttaaaagaaggggaaaaggttcacgagaac
agtgacaataaagtggtttttgatgcattaagggagctgtacaagcttctagagacaaag
catttggtttcagttcaagaatggatctcttttcttctaagggttgaagtggcagacaac
aggttcagagattccgctttaaaggagttaattgatatccaaaatcgtctcaaatcggtg
aagaagaagtgtgaagaatcaggttgtgctcttccaaacactgcaaatcgtgatgaagaa
gaagatgatttctgggaggagggtaagattggttcacttgagagcgagagatctactgtg
cccaataagcaagatgaagatttttccatgaaagtaacatctaataagttcaaaaataga
actcctgaaagcagtaaaaaagattgtaatgacaatgagattctcagtcctgaaggcggt
gaaaccaatttggaccctttaagaagtaagcttctggctgaagctcctgtgatgaagtgg
ggctctttcttggataactggggttcaaacaggaaggttttggctaaccagcggggattg
gagcttgaaagtcactggggtagggtggattatgacgcggttattctagctgagaaaatg
cccgaactgaatgtacatgcaactctttatgaagagcagcaaactgacattcaaccctgc
agggctcctttgagcaaaggggggctttgtcagagaagagacctgagagtttggccattt
catggacctattatacctcgagatgatgaaggaaagccactcaatcagaactctttaaaa
gaagagatatctcttgatttggggattgattccattgagcagttagcaaaacaagctgtg
aagaatgttcgtgagagagataaagaagtagcaaataagagagaaattgataaaaagtca
ctgaagcatgcaaaacttgcaagaattcgggagcacaatgaaacagctctaagggatgct
gccttgacatcaacttcaagatctgcatctgttggagaagatatgggggtgactgatggt
gagaaaccgtcagctagaaacaagaaggaaacactctcatccatgctgcacaagaaagtg
acaccaaaagataggatagctcagaggcttttgaattcatgggcaaaggattcaacaaca
agacagctcacattgggtgaagatgcaaattaccgagaagccttcccaaatcaatggcaa
tga
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