Castanea sativa (European chestnut): 142643902
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Entry
142643902 CDS
T11266
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
142643902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csaa04040
]
142643902
Ion channels [BR:
csaa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
142643902
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
142643902
NCBI-ProteinID:
XP_075674735
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Position
7:complement(6733835..6747402)
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AA seq
607 aa
AA seq
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AATTATTTSKTYILDPREKFLQGWNVVFVLSCVTAVALDPLFFYLPVIIQDKKCIWFDNR
LWITALVLRSFFDFIYLVHIILQFRTGFIDKKLLKSGKPELNTNARKIAKKYLWPRLIFD
ILAILPIPQVVIPTIFSEMRGTKTSNKVKLLNTFVLFQYVPRVSQIHLSWKKLTRNDKKF
DRFILVQASLNLILYILAGHVLGASWYVFSSQQLAACWHIACQNHTECVGNSFNCDRNFG
NLSFIDDICPIKTENTTSFNFGIFLEALQSGVLESTDFPQKLFYSFWWGMRNLSSLGQNL
QTSNHIWENCFALCISIFGMILFLYFLGNLQMYMQWTTSKSIKKWEKKRMKMKSSKRQKQ
QKNLKSWISKHDFGYTTKGKINDHIDQIFEADEDVYVETLIPDLPSELQSDVKRHICLDL
LKNLTIIKDSGLAKQEPLLLKICDSFKPVFFNEHHYMVREGDPIDTVYLITEGIVWTCTS
NNGEGSGPPHAERLEKGQYFGGKLLEWVLTPTSDDMSNLSKLPISSKTLKTHTKVEAFAL
LAHDLKQIWHSKLSRLGQEQLQSKAAARVQRIWRRNHPKTDDSNSVGGGSRKLQNPAKPD
NTVVAKQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gcagcaacaacagcaacaacaacatcgaagacatatattcttgacccaagagagaaattc
cttcaagggtggaatgtagtatttgtgttgtcatgcgtgactgcagtagcactggatccc
ttgttcttttaccttcctgtgatcattcaagacaagaagtgcatttggttcgacaataga
ttgtggatcacagctctagttttgcgatccttcttcgatttcatttatctagtgcatatt
atattgcaatttcgcactggttttatagacaaaaagcttctgaaaagtggaaaacctgag
ttaaatacaaatgctaggaaaatagctaagaagtatttgtggccacgcttaatattcgac
attctagctattcttcccatcccacaggtggtaattccgactattttttcagaaatgaga
ggcacgaaaacttcaaataaagtgaaactcttgaacacttttgttcttttccaatatgtg
ccaagggtatctcaaatccacctatcctggaagaaactaacaagaaatgacaagaagttt
gatagattcatactggtccaagcgtcattgaatttgatactatacatccttgctggtcat
gtattgggagcctcttggtatgtcttctcttctcaacaactagcggcttgttggcacata
gcatgtcaaaatcatactgaatgtgttggaaattcatttaactgtgatcgaaattttgga
aatctctcttttatagatgatatttgccctataaagaccgaaaatacaacgtcatttaac
tttggaatatttcttgaagcccttcaatctggtgtcttagaatccacagattttccacaa
aaactattttacagtttctggtggggcatgcgaaatttgagttcccttggtcaaaacctc
caaacaagtaaccatatatgggaaaattgctttgcactttgtatttccatctttggcatg
atactatttctatatttcttgggaaatttgcagatgtacatgcagtggacaacatcaaaa
tcaataaaaaagtgggaaaagaaacgcatgaagatgaagtcaagtaaacgacaaaagcaa
caaaaaaaccttaagtcatggatatccaaacatgactttggttatacaacaaaaggcaag
attaatgaccacatagatcagatatttgaagcagacgaagacgtttatgtagagaccctt
atccctgatcttccttctgaacttcaaagcgatgtcaagcgccatatctgcttagatcta
ctaaagaatctgactatcataaaagacagtggattggctaagcaagaaccactattgctt
aaaatctgcgactctttcaaaccagtgttcttcaacgagcaccactacatggttagggag
ggagacccaattgatacagtatacttgattacagaaggcattgtatggacttgtacaagc
aacaatggtgaaggatctggccctccacatgctgagcgtcttgaaaaaggtcagtacttt
ggaggaaaacttcttgaatgggttttgacacctacctccgacgacatgtccaacctatca
aaactccctatttcttcaaaaaccctgaaaacacacacaaaagtggaagcctttgctcta
ctggcccatgacttgaaacaaatatggcattctaagttgtcaagattaggccaagagcaa
ttgcagtccaaggcagctgctcgtgtacaacgaatctggcgccgcaatcacccgaagacg
gatgatagcaatagcgttggtggtggttcaagaaaacttcaaaatccagcaaagccagac
aatactgttgttgcaaagcaatag
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