Castanea sativa (European chestnut): 142644105
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Entry
142644105 CDS
T11266
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
142644105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csaa03021
]
142644105
Transcription machinery [BR:
csaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
142644105
Prokaryotic type
Archaeal type
TFB
142644105
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
142644105
NCBI-ProteinID:
XP_075674901
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All DBs
Position
1:complement(60389344..60390916)
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AA seq
308 aa
AA seq
DB search
MPDGFCTDCKAYTPIVFDHTAGDTICSECGLVLESRFIDETSEWRTFADESRDKDPNRVG
APSDPLLCGGGLGTVITKIGASCDSSFSSSRVIGQWQKVAQNPDASLINNFKRIGNMADT
LGLMETIKNHAKELYKKVTDQNACRGRNLSPIMAACLYYACQEEGLPRTMKEIAMVTQGA
TKKDIYRAKRLVREKLEIGNKVIHARDLARRYCSNLGLNNLLTKAVLETVKKSEEFDIRR
TSTSVLATIIYMITQLSDRKCSLRDIVLSAEVSESTIKGTFKDLHPYASRLIPKWYANEK
DIRKLCFP
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgggttttgtacagattgcaaggcatacacacccattgtgtttgatcacacg
gcgggtgacacaatatgctctgagtgtggacttgttcttgaatcccgcttcatagatgaa
acctcagagtggcgaacctttgccgatgagtccagagataaagatcccaatcgtgttggt
gccccctcagaccctttgctctgcggtggcgggcttggcacagttattacaaagattggt
gcttcttgtgattcttctttttcatcttcaagagtaattggccagtggcagaaagttgct
caaaacccagatgcctctcttatcaataacttcaaaaggattggtaacatggctgatacg
ttaggcctaatggagactattaagaatcatgccaaagagttatacaagaaggtgactgat
caaaatgcttgtaggggaaggaacttgagtcccataatggctgcttgcttgtactatgct
tgtcaagaagagggtttaccaaggacaatgaaggagattgccatggttactcagggagca
acaaagaaggatatatacagagccaaaaggttggtaagggaaaagttagagattggtaac
aaagtaatacatgctagggatcttgcaagacgttattgctccaatcttggtttgaacaat
cttttaaccaaggctgtgctagaaaccgtgaagaaatctgaggagtttgacataaggaga
acctctacatctgttctagcaacgattatttatatgataacacagctttcagatcggaag
tgctctcttcgagatattgtacttagtgctgaagtttcagaatcgaccattaaagggaca
ttcaaggatcttcacccttatgcttcaaggctgatacctaagtggtatgcaaacgagaag
gacatcaggaaactttgcttcccttga
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