Castanea sativa (European chestnut): 142644781
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Entry
142644781 CDS
T11266
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csaa Castanea sativa (European chestnut)
Pathway
csaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
142644781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csaa03400
]
142644781
DNA repair and recombination proteins [BR:
csaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
142644781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
142644781
NCBI-ProteinID:
XP_075675470
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All DBs
Position
7:37893836..37901852
Genome browser
AA seq
1156 aa
AA seq
DB search
MKVSSEVENYVSRSYPVTKCDKFKQKKQKSTSRIVKDSEPFASPNLVQMLDTSMFGSVTK
EIEALCARRSRLLNHDIAKNPMLPFTFSDVPKNQCKEPMNLVIQKATHLALESIIDLEDD
CMLIDALSVVPPVIDLSSDDEDDEHGKHSNICPKVALEPSVKDSIDILKSEDVKGQVEIM
IGKADIRRDKGCNFVVEDDVEVEEDSRWSFQEKESNYEPNTVDHSLEDIERKDVQNAADE
VDIRTNKDKYDGSGDDMEIEEDNHQIYQKEELNLQTYAEDNGLTNTCKMTVALECSEYIL
KSKAVREKVDSIIGKVDTRIIKDGNFGAEDVLVEEESRQLIQEKESNYEINTVDDRLDDK
QIKAPSERDIPKSKAEREKVDSIIGKVDMRIIKDGNFGAKDVLVEEESHQLFQEKESNYE
INTVDDRLNDKQIKAPSERVRNVADEINIRTDKDTYYGSGEDMVIEEDNYHSHQEEEYIL
QSNAKDDGLANIWNEMAVALECSKDIGVDPSTDEHTREGGEECDHSFFLKDDLGYVCRIC
GVVDKAIESIFEFQYSKGKRTTRTYMRDSQSNNSIGSDKSLPLGVKSSDDDLMANEIFAH
PRHSKQMKPHQVEGFNFLCSNLLSNNPGGCILAHAPGSGKTFLVISFIQSFLARYLHARP
LVILPKGILATWKKEFQIWQVEDIPLLDFYGSKAESRSQQLDVLRQWVSQKSILFLGYKQ
FSAIVCDRGTSKVATDCQDILLKVPSILILDEGHTPRNENTDMVQSLSRIQTPLKVILSG
TLYQNHVKEVFNILNLVRPKFLRLQASQDIVRRIMSRVQVSSVRKNLKPGMDLAFFDLVE
HTLQQKDENSKRKATVIQDLREMTRQVLHYYKGDFLDELPGLVDFNVMLNLSAIQKIEVE
KLRRLDYFRRNSLGSLVYMHPQLKYFSEKYPSTGDKSLVDDEKIDEMLENMNVREGVKVK
FFLNMLGLCESAGEKLLVFSQYILPLKLLERLSMKVKGWRPQKEIFMITGDSNSEYREWS
MERFNSSDDAKVFFGSIRACGEGISLVGASRILILDVHLNPSVSRQAIGRAFRPGQKRKV
YTYRLIAADSPEEEDHNTCFRKESISKMWFEWNENCGHSEFEMKTRDVKDCGDPFLESLS
LQEDIKLLSQRLEFSC
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttagttctgaagtagaaaattatgttagcagatcttatccagtgactaagtgt
gataagttcaaacagaagaaacaaaagtccacatcaagaattgttaaagattcagaacca
tttgccagtcccaatttggtgcaaatgttggatacaagtatgtttggaagtgtgacaaaa
gaaatagaggccctttgtgcacgaaggtcacgattgctgaaccatgatattgcaaaaaat
cctatgcttccttttacattttcagatgtgccaaagaaccagtgtaaagagcctatgaac
ctggtgattcagaaggccactcatcttgcacttgaaagtatcattgatttagaggatgac
tgtatgttaattgatgccctttcagtagttccacctgtaatagatcttagttcagatgat
gaagatgatgaacatgggaagcattctaatatatgtccgaaggttgcattggaaccttcc
gtgaaggattccattgatattctaaagagcgaagatgtaaaggggcaagtagaaatcatg
attggcaaagctgatattaggagggataaaggttgtaattttgttgtggaagatgatgta
gaggttgaggaagacagtcgctggtcatttcaggaaaaagaaagtaattatgaacctaat
actgtagatcatagcctggaagatatagaaagaaaagatgtacaaaatgcagctgatgaa
gttgatatcaggacaaataaagataaatatgatggctcaggagatgatatggagatcgag
gaagacaatcaccaaatttatcagaaagaggaacttaatcttcaaacatatgctgaagac
aatggtctgacaaatacatgcaagatgacggtcgcgttagaatgttctgagtatattcta
aagagcaaggctgtaagggaaaaagtggatagcataattggtaaagttgatacgaggata
attaaagatgggaactttggtgcagaagatgtactagttgaggaagagagtcgccagtta
atccaggagaaagaaagtaattatgaaattaatactgtagatgataggctggatgataag
caaatcaaagctccaagcgaaagggatattccaaagagcaaggctgaaagggaaaaagtg
gatagtataattggtaaagttgatatgaggataattaaagatgggaactttggtgcaaaa
gatgtactagttgaggaagagagtcaccagttatttcaggagaaagaaagtaattatgaa
attaatactgtagatgataggctgaatgataagcaaatcaaagctccaagcgaaagggta
agaaatgtggcagatgaaatcaatatcaggacagataaggatacatactatggttcagga
gaggatatggtgattgaggaagacaattaccactctcatcaggaagaggaatatattctt
caatcaaatgctaaagacgatggtctggctaatatatggaatgagatggcagtcgcatta
gaatgttccaaggatattggtgttgatccttcaactgatgaacacacaagagaaggtggg
gaagaatgtgatcattcttttttcttgaaggacgatctcggttatgtttgtcgcatttgt
ggagttgttgacaaagcaatagaatccatatttgaattccaatatagtaagggcaaaagg
actacacgaacttacatgcgtgattctcagagtaacaacagcatagggtcagataagagt
ttaccacttggagtaaaatcttctgatgatgatctgatggcaaatgagatttttgctcat
cctaggcatagcaagcaaatgaaaccccatcaagtggagggcttcaattttctttgtagc
aacctgctatctaataatccaggaggctgcattttggcccatgctccaggttctggaaag
acatttttggttataagtttcattcagagtttcctagccaggtatcttcatgctaggcca
ctggttattctacctaaaggcatcctggctacctggaagaaagagttccaaatatggcaa
gttgaagacattccgttgcttgatttttacggttcaaaagcagagagtcgatctcagcag
ctggatgtattgagacaatgggtatctcagaagagcatcctatttcttggatataagcag
ttctctgccattgtttgtgaccgtggaactagcaaggtggcaactgattgtcaggatatt
cttctgaaggtcccatccattcttatcttagatgaaggtcatactccaaggaatgagaac
actgatatggttcagtccctttcaagaatccaaacacctctcaaagtcattctttcgggt
actctttatcaaaatcatgtgaaagaggtattcaacattttgaatcttgttcgtcctaag
tttcttagattgcaagcttcccaagatattgttaggcgcattatgagcagagtacaggta
tcaagcgtgaggaagaatttaaaacctggcatggacttagctttctttgacttagtggag
catacactgcaacagaaggatgaaaactccaagaggaaagcgactgtcatacaagacctc
cgtgagatgactcgccaagtcctccattactacaaaggagatttcctggatgagcttcct
ggacttgttgatttcaatgtaatgctcaatctcagtgcaatacagaaaattgaagttgaa
aagttgaggaggttggattacttcagaagaaattctttgggtagtcttgtctatatgcat
ccgcagttgaaatatttttcagagaaatatccatcaactggagacaaaagtttagttgac
gatgagaagatagatgaaatgttagaaaatatgaatgtgagagagggagtaaaagtgaag
ttctttcttaatatgttgggcctatgtgaatcggctggtgagaagctgctggtttttagc
caatacatattgcccctgaaactcttggagagattatcaatgaaggtaaaaggttggaga
cctcaaaaagaaatttttatgataactggtgattcaaattctgagtacagggagtggtcc
atggaacgctttaacagctctgatgatgcaaaagtcttctttggttcaatcagagcttgt
ggggaaggtatatctctagtgggggcttctcgcatcctaattttggatgttcatcttaat
ccatcagtaagccgccaagcaataggccgtgcattccgaccaggtcaaaagagaaaagta
tacacttatagattgattgctgctgattcacctgaagaggaagatcacaacacatgcttc
agaaaggagtcaatttcaaagatgtggtttgagtggaatgagaactgtggacatagcgaa
tttgaaatgaagactcgtgatgtgaaggattgtggtgatccattcttggaaagtctgtca
ttgcaggaagatataaagcttttgtctcaaaggttagagttttcgtgctga
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