Chlorocebus sabaeus (green monkey): 103215286
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Entry
103215286 CDS
T04361
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03008
Ribosome biogenesis in eukaryotes
csab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103215286 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
103215286 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103215286 (XRN2)
03019 Messenger RNA biogenesis [BR:
csab03019
]
103215286 (XRN2)
03009 Ribosome biogenesis [BR:
csab03009
]
103215286 (XRN2)
03016 Transfer RNA biogenesis [BR:
csab03016
]
103215286 (XRN2)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103215286 (XRN2)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
103215286 (XRN2)
Ribosome biogenesis [BR:
csab03009
]
Eukaryotic type
Pre-60S particles
RNases
103215286 (XRN2)
Transfer RNA biogenesis [BR:
csab03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
103215286 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
103215286
NCBI-ProteinID:
XP_007959787
Ensembl:
ENSCSAG00000011094
UniProt:
A0A0D9RFB4
LinkDB
All DBs
Position
2:50287718..50373869
Genome browser
AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFSIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIRENAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFTPSGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSISPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETRRNSLGGDVLFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQG
KFSLDEEAILPDQIVCSPVPMLRDLTQNTVVSINFKDPQFAEDYIFKAVMLPGARKPAAV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSGTGIYSNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYNWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggcgttcttccgctggctcagccgcaagtacccgtccatcatagtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagattccagttgatgccagtaaa
cctaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagatgaaatgatggttgca
atttttgagtacattgacagacttttcagtattgtaagaccaagacgacttctctacatg
gcaatagatggagtggcaccacgtgccaaaatgaaccagcagcgttcaaggaggttcaga
gcatcaaaagaaggaatggaagcagcagtcgagaagcagcgagtcagggaagaaatattg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagattcgacagcaactgtatt
acaccaggaactgaatttatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaatttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattacattagaaggcaaagagcccagcctaac
catgacccaaatactcatcattgtttatgtggagcagatgctgatctcattatgcttggc
cttgccacacatgaacccaactttaccattattagagaagaattcaaaccaaacaagccc
aaaccatgtggtctttgtaatcagtttggacatgaggtcaaagattgtgaaggtttgcca
agagagaagaagggaaagcatgatgaacttgccgatagtcttccttgtgcagaaggagag
tttatcttccttcggcttaatgttcttcgtgagtatttggaaagagaactcaccatggcc
agcctaccattcacatttgatgttgagaggagcattgatgactgggttttcatgtgcttc
tttgtgggaaatgacttcctccctcatttgccgtcgttagagattagggaaaatgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttcactcctagtggaatattaactcct
catgccttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcaatatctcctaatacgagtttc
acatctgatggctccccgtctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagccagaggataacgtcaggttatgggaagctggctggaagcagaggtac
tacaagaacaaatttgatgtggatgcagctgatgagaagttccgtcggaaagttgtgcag
tcgtacgttgaaggactttgctgggttcttagatattattaccagggctgtgcttcctgg
aagtggtattatccatttcattatgcaccatttgcttcagactttgaaggcattgcagac
atgccatctgattttgagaagggtacaaaaccgtttaaaccactggaacaacttatggga
gtttttccagctgcaagtggtaattttctacctccatcatggcggaagctcatgagtgat
cctgattctagtataattgacttctatcctgaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctcttgccattcgtggatgagcgaaggctacgagct
gccctagaagaggtatacccagacctcactccagaagagaccagaagaaacagccttgga
ggtgatgtcttatttgtggggaaacatcacccactccatgacttcattttagagctgtac
cagacaggttccacagagccagtggatgtaccccctgaactatgtcatgggattcaagga
aagttttctttggatgaagaagccattcttccagatcaaatagtatgttctcctgttcct
atgttaagggatctgacacagaacactgtagtcagtattaattttaaagacccacagttt
gctgaagattacatttttaaagctgtaatgcttccaggagcaagaaaaccagcagcagta
ctgaaacctagtgactgggaaaaatccagcaatggacggcagtggaagcctcagcttggc
tttaaccgtgaccggagacctgtgcacctggatcaggcagccttcaggactttgggccat
gttatgccaagaggctcaggaactggcatttacagcaatgctgcaccaccacctgcgact
taccagggaaacttatacaggccgcttttgagaggacaagcccagattccaaaacttatg
tcaaatatgaggccccaggattcctggcgaggtcctcctccccttttccagcagcaaagg
tttgacagaggcgttggggctgaacctctgctcccatggaaccggatgctgcaaacccag
aatgcagccttccagccaaaccagtaccagatgctagctgggcctggtgggtatccaccc
agacgagatgatcgtggagggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccctcaggaagatacaattggaattaa
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