KEGG   Chlorocebus sabaeus (green monkey): 103216065
Entry
103216065         CDS       T04361                                 
Symbol
COL13A1
Name
(RefSeq) collagen type XIII alpha 1 chain
  KO
K16617  collagen type XIII alpha
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:csab00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    103216065 (COL13A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:csab00536]
    103216065 (COL13A1)
Glycosaminoglycan binding proteins [BR:csab00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103216065 (COL13A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 103216065
NCBI-ProteinID: XP_007961388
Ensembl: ENSCSAG00000008138
LinkDB
Position
9:complement(61342482..61500072)
AA seq 733 aa
MVAESTHKAAATGACGPRELGAPGTVALAAARAERGARLPSPGSCGLLALAFCSLALSLL
AHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP
PGPPGPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGSPGDAGLSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAP
PPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGI
QGYHGRKGERGMPGMPGKHGAKGTPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK
GEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGRQGDKGEPGAAGEQGPAG
PKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLP
GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGMKGENGHPGSPGEKGEKGETGQAGSP
GEKGEAGEKGDPGAEVPGPSGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGIQGEKGDRG
PLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPG
DKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGHRGFKGEKGEPGLPGLDGLDAPCPL
GEDGLPVQGCWNK
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggtagcggagagcacccacaaagcggcagccaccggtgcctgcggccctagggagttg
ggcgcgcccgggacggtggctctggcggcggcgcgggcggagcgcggcgcacggttgccg
agtccagggtcgtgcgggctgctggcgctggccttctgctcgctggcactcagcctgctc
gcccactttcggacggcggagctgcaggcccgggtgctgcgcctggaagcggagcgcggg
gagcagcaaatggagacggctattttgggacgagtcaaccaactgctggacgagaaatgg
aagctccactcaaggaggcgccgggaggccccaaagacatctccaggatgtaactgcccg
ccaggacctcctggtcccactggaagacccggactcccaggggacaaaggtgccattggg
atgcctggacgtgtgggagtaaagggccaaccaggcgagaaggggtcccccggagatgct
gggctgtccatcatcggcccccgcggtccccctggtcaaccaggcactcgaggttttcct
ggatttccgggtcccattgggctggatggcaaaccgggccacccaggaccaaagggcgac
atgggtctgacgggtcccccaggacagccgggacctcagggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccggtcataaaaaggcggacgttccagggtgaacagagccaagccagcatccaaggt
ccaccagggcccccaggcccccctggaccaagtggacctctggggcacccaggactgcca
gggcccatggggccacccggcttacctgggcctcctggaccaaagggagacccagggatc
cagggctaccacggccggaagggagaacggggcatgccagggatgcccggcaagcatgga
gccaagggcactcctggaattgccgtggctggaatgaagggtgagccagggatcccagga
accaagggtgagaagggggctgaaggctcccctgggcttcctggcctcctggggcagaag
ggagagaaaggcgatgctggcaactccattggaggaggcagaggggaacctggccctcca
gggctccctggacccccagggccaaagggagaagcgggtgtcgatggccaggtcggcccc
ccagggcggcaaggagacaagggggagcctggagcagctggagaacagggaccagctggc
cccaagggctccaagggagaaccagggaaaggagagatggtggattacaatggaaacatc
aatgaggctctccaggagatccggacactggccttgatggggcctcctggtcttcctggg
caaattggcccacctggagctccagggattccaggccagaagggggagattggactgcca
ggccctccaggacacgatggggagaagggacctcgcggtaaaccaggagacatgggccct
cctggtccccaaggccccccaggaaaggatggacctccaggaatgaaaggagaaaacggg
cacccagggagcccaggagaaaagggagagaaaggggagacaggacaagcaggctcgccg
ggagagaaaggagaagccggggagaagggcgatccaggagcagaggttcctgggccgtcg
gggccagaggggcctcccggacctccggggctccaaggtgttcctggaccaaagggggaa
gcaggactagatggagcaaaaggagagaaaggcatccagggagaaaaaggagaccgtggt
cccctgggactacccggagcttcaggtttggacggcaggcctgggccaccgggtactcca
ggaccaattggagttccaggcccagcaggaccaaagggcgagaggggcagcaaaggagac
cctgggatgacaggaccaacgggagcagctgggcttcctggtttacatggaccacctggg
gacaagggaaaccggggggagagggggaagaaaggctctagagggcctaaaggggataag
ggagaccaaggagcgcctggattagatgccccctgcccgttgggacaccgaggttttaaa
ggagagaaaggggagccggggttaccagggctggacggactggatgccccatgcccattg
ggcgaagacggcttgccagtccaaggctgctggaacaagtga

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