Chlorocebus sabaeus (green monkey): 103216455
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Entry
103216455 CDS
T04361
Symbol
TAF5
Name
(RefSeq) TATA-box binding protein associated factor 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103216455 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103216455 (TAF5)
03036 Chromosome and associated proteins [BR:
csab03036
]
103216455 (TAF5)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103216455 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
103216455 (TAF5)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103216455 (TAF5)
STAGA complex
103216455 (TAF5)
TFTC complex
103216455 (TAF5)
SAGA complex
103216455 (TAF5)
SLIK complex
103216455 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
103216455
NCBI-ProteinID:
XP_007962201
LinkDB
All DBs
Position
9:96411690..96432668
Genome browser
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNGPNGGGGNVAASSSTGGD
GGTPKLTVAVSTAAPAGAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEVDSVGAEVASALLSRVTASAPGPAAPDPPGTGASGVTAVSGSASG
PAAAGKVGSVAVEDQPDVSAVLSAYSQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccaacgctgctacctccgcaggcgggggacggcgcaggcgagggtagcggcggcactacc
aacaacggccccaacggcggcggcgggaacgttgcggcgtcgtcgtccactggcggggat
ggcgggacccccaagctcacggtggctgtctccaccgctgccccggcgggggcggccccg
gtgcctgcggctgctccggaggccggcgctccgcacgaccgacagactctactggccgtg
ctgcagttcctacggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgaggcc
cggctgctggaggaggcagtggcgggctccggagccccaggagaggtggacagcgtcggc
gctgaggtggccagcgcgcttctcagccgggtgaccgcctcggcccctggccctgcggcc
cccgaccctccgggcactggcgcttcgggggtcacggccgtctcaggttcagcctcaggt
cctgcggctgcgggtaaagttggaagtgttgctgtggaagaccagccagatgtcagtgct
gtgttgtcggcctacagccaacaaggagatcccacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccctggactgccatcgggcagagttatcccaactcttt
tatcctctgtttgtgcacatgtacttggagctagtctacaatcaacatgagaatgaagca
aagtcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacgt
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgtgactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagaacca
gaaattgaggtacctttggatgatgaggatgaagagggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaaaaaagatagtattggatccaaaagcaaaaaacaagatcccaat
gctccacctcagaacagaatccctcttcctgagttgaaagattcagataagttggataag
ataatgaatatgaaagaaaccaccaaacgagtgcgccttgggccagactgcttaccctcc
atttgtttctatacatttctcaatgcttaccagggtctcactgcagtggatgtcactgat
gattctagtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtaaca
cccaaaaagcttcgtagtgtcaaacaagcatcagatcttagtcttatagacaaagaatca
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccggataggaactatctgctttcc
tcttcagaggatggaactgttagattgtggagccttcaaacatttacttgtttggtggga
tataaaggacacaactatccagtatgggacacacaattttctccatatggatattatttt
gtgtcagggggccatgaccgagtagctcggctctgggctacagaccactatcagccttta
agaatatttgctggccatcttgctgatgtgaattgtaccagattccatccaaattctaat
tatgttgctacgggctctgcagacagaactgtgcgactctgggacgtcctaaatggtaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtacttctttgggatattggacat
ggtttgatggttggagaattaaaaggccacactgatacagtctgttcacttaggtttagt
agagatggtgaaattttggcatcaggttcaatggataatacagttcgattatgggatgct
atcaaagcctttgaggatttagagactgatgactttactacagccactgggcatataaat
ttacctgagaattcacaggagttgttgttgggaacatatatgaccaaatcaacaccagtt
gtacaccttcattttactcgaagaaacctggttctagctgcaggagcttatagtccacaa
taa
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