Chlorocebus sabaeus (green monkey): 103216556
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Entry
103216556 CDS
T04361
Symbol
TRUB1
Name
(RefSeq) TruB pseudouridine synthase family member 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csab03016
]
103216556 (TRUB1)
Enzymes [BR:
csab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103216556 (TRUB1)
Transfer RNA biogenesis [BR:
csab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103216556 (TRUB1)
Prokaryotic type
103216556 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
103216556
NCBI-ProteinID:
XP_007962361
Ensembl:
ENSCSAG00000004891
UniProt:
A0A0D9QXX4
LinkDB
All DBs
Position
9:107809018..107848839
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AA seq
350 aa
AA seq
DB search
MAASEAAVTSSSSLKTDTCPVLETAGTVAAMAATPPARAAAAVVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGSGTKMLTSMLSGSKRYIAIGELGKATDTLDSTGKVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLFPAELALKKSKPEKSNEQVLSCEYITLNEPKGEDDVIKTC
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttctgaggcggcggttacgtcttcgtcgtctttgaaaacagacacgtgccct
gtccttgaaactgcaggaacggtcgcagcaatggctgcgaccccgccagcaagggctgca
gccgcagtggttgcggccgcggccaggaccggatccgaagccagggtctccaaggccgct
ttggctaccaagctgctgtccctgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggttgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactcta
gacagcgcagcccgaggagttctggttgttggaattggaagtggaacaaaaatgttgacc
agtatgttgtcagggtccaagagatatattgccattggagaactggggaaagctactgac
acactagattctacggggaaggtaacagaagaaaagccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactgggaatataatgcaagttccccccctctat
tctgcattaaagaaagatggacagagactttcgactttgatgaagagaggtgaagttgta
gaagcaaaacctgccaggccagtgactgtgtacagtatctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggaaaagaactgtcttcctgtgccaatgtgctagagctgacccgaaccaaacag
ggaccatttacgctagaagaacatgcccttcctgaagacaaatggacaattgatgacatt
gcacagtctcttgagcattgctcatctcttttcccagcagagctggcacttaaaaaatca
aaacctgagaagtctaatgaacaggttttgagctgtgaatatataactctaaatgagcca
aagggagaagatgatgtaattaagacgtgttga
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