Chlorocebus sabaeus (green monkey): 103217157
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Entry
103217157 CDS
T04361
Symbol
SCAF4
Name
(RefSeq) SR-related CTD associated factor 4
KO
K13167
SR-related and CTD-associated factor 4
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103217157 (SCAF4)
03041 Spliceosome [BR:
csab03041
]
103217157 (SCAF4)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103217157 (SCAF4)
Spliceosome [BR:
csab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
103217157 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103217157
NCBI-ProteinID:
XP_007963266
Ensembl:
ENSCSAG00000009438
UniProt:
A0A0D9RAP7
LinkDB
All DBs
Position
2:60397173..60459295
Genome browser
AA seq
1151 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAESVTNNEGSPPPPVKVSSEPTAQATPNSVPAVPQL
PSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPALDNAVMAQVQAITAQLKTTPTQ
PSEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDTTAVATTVPAAAVPPAPTA
TVPAAAAAPAAASPPPPQATFGFPGDGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPL
PPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQASFQAQNEPITQKPHQQEMEVEQP
CIQDVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQ
ERRDREKERERRQKGLPQVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINM
IPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGV
TYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIP
KPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPP
PPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDL
SIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPV
IGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAM
PPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQQQQQQPQPQPPQQ
QQQQQQQPQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERY
GNRNDDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEAR
GKEKPEVTDRAGGNKTVEPPSSQVGNVDTASELEKGESEAAVLKPSEELPAEATSSVEPE
KDSGSAAEAPR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcgcttatggatatgaaacctccc
atctctagagccaagatgattctcatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccaggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaaccgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaac
ggagtgttcaaaattgaaattattcaacctcttttggacatggcagcaggaactagtaat
gcagccccagtagcagaaagtgttaccaataatgaaggctcacctccacctccagtaaaa
gtttcttctgaacctaccgcacaagccactccaaactccgtcccagctgtaccacagttg
cccagctctgatgcttttgctgctgtggctcagctgtttcagacaactcaaggccaacag
cttcagcagatccttcagacttttcaacagcctccaaaaccacagtctcctgcccttgac
aatgctgtgatggctcaggttcaggctatcacagctcagttaaagacaactcctacacaa
ccatctgaacaaaaagctgctttccctccacctgaacagaaaactgcatttgacaagaag
ttgcttgatagatttgactatgatgatgagccagaagctgtggaagaatcaaagaaagag
gataccactgccgtcgccacaacagtacctgctgctgctgtgccccctgcacctaccgcc
actgtgcctgctgctgctgctgcacccgctgctgcctctcctcctcctccacaggcaaca
tttggctttcctggagatggcatgcagcagccagcatacacacagcatcaaaatatggat
cagtttcagccacgaatgatgggaatacaacaggatccaatgcaccatcaggttccactt
cctcctaatggacaaatgccaggatttggacttcttcctacacctccatttcctcccatg
gctcagcctgtgattcctccaactccaccagtgcagcagcctttccaagcttcttttcag
gcacagaatgaaccaattacacagaagccacatcagcaggaaatggaagtagaacaacct
tgtattcaagacgttaagcgacatatgtctgataacagaaagtcaagatctaggtcagca
tccaggtcaccaaaaaggaggcgatctagatctggttctagatctcgaaggtctcgtcat
cgacgttctcgatctcggtccagggatagacgccgacattctcctcgatctcgatcccaa
gaaagacgggatcgagaaaaagagagagaacgtcgacaaaaaggcctccctcaagtgaaa
ccagaaactgcaagtgtttgcagtactaccctctgggtgggacagctggacaaaagaact
actcagcaggatgttgccagtctcttggaagagtttggtccaattgaatcaattaatatg
attcctcccaggggttgtgcctatattgttatggttcataggcaagatgcgtatcgtgcc
ctgcagaaactgagccgaggaaactataaagtgaaccagaaatccataaagattgcctgg
gccttaaacaaaggaataaaggcagattataagcagtattgggatgtagaacttggtgtt
acttatattccatgggacaaagtcaagcctgaggaactggagagtttttgtgaaggagga
atgttggacagtgacacacttaacccagattggaaaggaattcctaagaagcctgaaaat
gaagttgctcaaaatggaggtgctgaaacctcacacacagaaccagtatcacccatacct
aaaccgttacctgtgcctgtccctcctattcctgttcctgcacctataacagtgccccct
ccacaggtcccaccacatcaaccaggtccacctgtagttggtgctctccagccacctgct
ttcacaccgcctctgggaattccacctccaggctttggtcctggtgttcctcctccccct
cctcctccaccatttttgcgcccaggattcaacccaatgcatttaccaccaggttttctt
cctcctggacccccacctcctataactccaccagtatccattcctcctcctcacactcca
ccaataagcatcccaaactctactatcgctggtataaatgaagacactacaaaagactta
tctattggaaatcccattccaacagtggtgtctggggctagaggaaacgccgagtctggt
gacagtgtgaaaatgtatggctctgctgtgccacctgctgcacccacgaatctgcccacc
cctcctgtaacccagcctgtttcacttcttggcactcaaggagttgcccctggtcctgta
attggacttcaggcaccatctactggtcttcttggcgcccggcccggtctcatcccactc
cagcgccctccgggaatgcccccacctcacttacagcggttccctttgatgccgccccgt
cccatgccaccgcacatgatgcacagaggcccgccgccaggaccagggggctttgcaatg
cccccacctcatggaatgaaaggtcccttcccaccacatggccccttcgttaggcctggt
ggaatgccagggctcgggggcccagggccaggcccagggggtcctgaagacagagacgga
aggcaacagccgccgcaacagcaacagcagcagcagccgcagccgcagccgccccagcaa
cagcagcagcagcagcagcagccgcagcagccgccgccatcacaacaacctccaccaaca
cagcagcagccacagcagtttagaaatgataacagacagcagttcaattcaggtagagac
caagaaaggtttggaagaagatctttcggaaatagggtggaaaatgaccgggaacggtat
gggaaccgtaatgatgatagagataatagtaaccgtgacaggagagagtggggaaggagg
agccctgaccgggacaggcacagagacttggaagagagaaatagacgctctagtgggcat
cgagacagagagagagattctagagatagagagtctcgtagagagaaggaagaagcacga
ggaaaggaaaagcctgaggtgacagacagggcaggtggtaacaaaaccgttgaacctccc
agtagccaagtgggaaatgtagacactgcttcagaacttgagaagggggagtctgaggct
gcagtcctaaagccttctgaagagttacctgctgaggctacctcatccgttgaacccgaa
aaggattctggctcagcagcagaggctcctcgttaa
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