Chlorocebus sabaeus (green monkey): 103218775
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Entry
103218775 CDS
T04361
Name
(RefSeq) eukaryotic initiation factor 4A-III-like
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03013
Nucleocytoplasmic transport
csab03015
mRNA surveillance pathway
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103218775
09122 Translation
03013 Nucleocytoplasmic transport
103218775
03015 mRNA surveillance pathway
103218775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103218775
03041 Spliceosome [BR:
csab03041
]
103218775
03009 Ribosome biogenesis [BR:
csab03009
]
103218775
03012 Translation factors [BR:
csab03012
]
103218775
Enzymes [BR:
csab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103218775
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103218775
mRNA cycle factors
Stress granule specific factors
103218775
Spliceosome [BR:
csab03041
]
Complex C
Other components
EJC/TREX
103218775
Ribosome biogenesis [BR:
csab03009
]
Eukaryotic type
90S particles
Helicases
103218775
Translation factors [BR:
csab03012
]
Eukaryotic type
Initiation factors
eIF-4
103218775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
Utp25_C
TniB
Motif
Other DBs
NCBI-GeneID:
103218775
NCBI-ProteinID:
XP_007966182
LinkDB
All DBs
Position
11:complement(26068510..26069979)
Genome browser
AA seq
411 aa
AA seq
DB search
MATTATMATSGSPRKRLLKEEDMTKVEFETSEEVDVTPTFETMGLREDLLRGVYTYGFEK
PSAIQQGATKQIIKGRDVIMQSQSGTGKTAIFSISVLQCLDIQVHETQALILAPRRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGLHVVADTPGXVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYEVYRYLPPATQVVLISATLPHEILEMTNXFMTDPIRIL
AKRDELTLESIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYHLPNNKEF
YIHKIGRSGRYGRKGVAINFVKNDDIGILRDIEQYYTTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacggccacgatggcgacctcgggctcgccgcgaaagcgtctgctcaaagag
gaagacatgaccaaagtggaattcgagaccagcgaggaggtggatgtgacccccaccttc
gaaaccatgggcctgcgggaggacctactgcggggcgtctacacttacggttttgaaaaa
ccatcagcaatccagcaaggagcaaccaagcagatcatcaaagggagagatgtcattatg
cagtctcagtccggcacaggcaaaacagccatcttcagtatctcagtcctccagtgtttg
gatattcaggttcatgaaactcaagctttgatcttggctcccaggagagagttagctgtg
cagatccagaaggggctgctggctctcggcgactacatgaatgtccagtgccatgcctgc
attggaggcaccaatgttggggaggacatcaggaagctggattatggactgcatgttgtt
gcagacactccagggnntgtttttgatatgattcgtcgcagaagcttaaggacacgtgct
atcaaaatgttggttttggatgaagctgatgaaatgttgaataaaggtttcaaagagcag
atctatgaagtgtacaggtacctgcctccagccacacaggtggttctcatcagtgccacg
ctgccacacgagatcctggagatgaccaacnaattcatgaccgacccaatccgcatcttg
gcgaaacgtgatgaattgactctggaaagcatcaagcaattttttgtggcagtggagagg
gaagagtggaaatttgacactctgtgtgacctctacgacacactgaccatcactcaggcg
gtcatcttctgcaacaccaaaagaaaggtggactggctgacagaaaaaatgagagaagcc
aacttcactgtgtcctcaatgcacggagacatgccccagaaagagcgggagtccatcatg
aaggagttccggtcgggtgccagccgagtgcttatttctacagacgtctgggccagggga
ttggatgtccctcaggtgtccctcatcatcaactatcatctccccaataacaaagaattt
tacatacacaaaattgggagatcaggtcgatacggccggaagggtgtcgccattaacttt
gtaaagaacgatgacatcggcatcctcagagatattgagcagtactataccactcagatt
gatgagatgcctatgaacgttgctgatctgatctga
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