Chlorocebus sabaeus (green monkey): 103219297
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Entry
103219297 CDS
T04361
Symbol
APTX
Name
(RefSeq) aprataxin
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103219297 (APTX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csab03400
]
103219297 (APTX)
Enzymes [BR:
csab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
103219297 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
103219297 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
103219297 (APTX)
DNA repair and recombination proteins [BR:
csab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103219297 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
103219297 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
FHA_2
zf-C2HE
HIT
FHA
FtsK_SpoIIIE_N
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
103219297
NCBI-ProteinID:
XP_007967200
Ensembl:
ENSCSAG00000009885
LinkDB
All DBs
Position
12:47239094..47346528
Genome browser
AA seq
368 aa
AA seq
DB search
MSSRSAGSGEAQMSNVNLSVSDVWRLMMRVCWLVRQDSRHQRIRLPHLEAVVIGRGPETK
ITDKKCSRQQVQLKAECNKGYVKVKQVGVNPTSIDSVVIGKDQEVKLQPGQVLHMVNELY
PYIVEFEEEAKNPGLETHRKRKRSGDSDSIERDAAQEAEPGTGLEPGSNHNQCSVPPKKG
KDAPIKKESLGHWSQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWTAISSLK
AVTREHLELLKHMHTVGEKVIVDFAGSSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLK
NKKHWNSFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKE
HLRKHWTQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgcagcgccggaagcggcgaggcacagatgagtaacgtgaatttgtccgtc
tccgacgtctggagactgatgatgcgggtgtgctggttggtgagacaggacagccggcac
cagcgaatcagacttccacatttggaagcagttgtgattgggcgtggcccagagaccaaa
atcactgataagaaatgttctcgacagcaagtacagttgaaagcagagtgtaacaaggga
tatgtcaaggtaaagcaggtaggagtcaatcccaccagcattgactcagtcgtaattggg
aaggaccaagaggtgaagctgcagcctggccaggttctccacatggtgaatgaactttat
ccatatattgtagagtttgaggaagaggcaaagaaccctggcctggaaacacacaggaag
agaaagagatcaggtgatagtgattctatagaaagggatgctgctcaggaagctgagcct
gggacagggctggaacctgggagcaaccataaccaatgctccgtgcctccaaagaaggga
aaagatgcacctatcaaaaaggaatcactgggccactggagtcaaggcttgaagatttct
atgcaggaccccaaaatgcaggtttacaaagatgagcaggtggtggtaataaaggataaa
tacccgaaggcccgttaccattggctggtcttaccatggaccgccatttccagtctgaag
gctgtgaccagggagcaccttgaactcctcaagcatatgcacactgtgggggaaaaggtg
attgtagattttgctgggtccagcaaactccgcttccgattgggctaccacgccattccg
agtatgagccatgtacatcttcatgtgatcagccaggattttgattctccttgccttaaa
aacaaaaaacattggaattctttcaatacagaatacttcctagaatcacaagctgtgatc
gagatggtacaagaggctggtagagtgactgtccgagatgggatgcctgagctcttgaag
ctgccccttcgttgtcatgagtgccagcagctgctgccttccattcctcagctgaaagaa
catctcaggaagcactggacacagtga
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integrated database retrieval system