KEGG   Chlorocebus sabaeus (green monkey): 103219853
Entry
103219853         CDS       T04361                                 
Symbol
PRPF4
Name
(RefSeq) pre-mRNA processing factor 4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103219853 (PRPF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csab03041]
    103219853 (PRPF4)
Spliceosome [BR:csab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    103219853 (PRPF4)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_IFT140_1st WD40_like Ge1_WD40 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 103219853
NCBI-ProteinID: XP_007968135
LinkDB
Position
12:complement(26279510..26296771)
AA seq 471 aa
MASSRTSSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSEILIFFFFFFSNRLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGP
NSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDD
RPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQ
KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWD
LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY
GINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYD
NTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq 1416 nt   +upstreamnt  +downstreamnt
atggcttcctcgcgaacctcctccacggcaaccaaaactaaagcacccgatgacttagtt
gctccggttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttggggaaagaaggacttaaagcagggatcgaa
gctggaaatattaacataacctctgaaattctgatctttttttttttttttttttcaaac
aggttaagaaatatcctgtcagtcgtcggtactgatgccttgaaaaagaccaaaaaggat
gatgagaaatctaagaagtccaaagaagagtatcagcaaacctggtaccatgaaggacca
aatagcttgaaggtggcaagactatggattgctaattattcattgcccagggcaatgaaa
cgcttggaagaggcccgactccataaggagattcctgagacaacgaggacctcccagatg
caagagctgcacaagtctctccggtctttgaataatttttgcagtcagattggggatgat
cggcctatctcctactgtcactttagtcccaattccaagatgctggccacagcttgttgg
agtgggctttgcaagctctggtctgttcctgattgcaacctccttcacactcttcgaggg
cataacacaaatgtaggagcaattgtattccatcccaaatctactgtctccttggaccaa
aaagatgtcaacctggcttcttgtgcggctgatggctctgtgaagctttggagtctcgac
agtgatgaaccagtggcagatattgaaggccatacagtgcgtgtggcccgggtaatgtgg
catccttcaggacgtttcctgggcaccacctgctatgaccgttcatggcgattatgggat
ttggaggctcaagaggagatcctgcatcaggaaggccacagcatgggtgtgtatgacatt
gccttccatcaagatggctctttggctggcactgggggactggatgcatttggtcgagtt
tgggacctacgcacaggacgttgtatcatgttcttagaaggccacctgaaagaaatctat
ggaataaatttctcccccaatggctatcatattgcaaccggcagtggtgacaacacctgc
aaagtgtgggaccttcgacagcggcgttgcgtctacaccatccctgctcatcagaactta
gtgactggtgtcaagtttgagcctatccatgggaacttcttgctgactggtgcctatgat
aacacagccaagatctggacgcacccaggctggtccccgctgaagactctggccggccat
gaaggcaaagtgatgggcctagatatttcttctgatgggcagctcatagccacttgctca
tatgacaggaccttcaagctctggatggctgaatag

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