Chlorocebus sabaeus (green monkey): 103219853
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Entry
103219853 CDS
T04361
Symbol
PRPF4
Name
(RefSeq) pre-mRNA processing factor 4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103219853 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csab03041
]
103219853 (PRPF4)
Spliceosome [BR:
csab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103219853 (PRPF4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
103219853
NCBI-ProteinID:
XP_007968135
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Position
12:complement(26279510..26296771)
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AA seq
471 aa
AA seq
DB search
MASSRTSSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSEILIFFFFFFSNRLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGP
NSLKVARLWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDD
RPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQ
KDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWD
LEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIY
GINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYD
NTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgcgaacctcctccacggcaaccaaaactaaagcacccgatgacttagtt
gctccggttgtgaagaaaccacacatctattatggaagtttggaagagaaggagagggag
cgtctggccaaaggagagtctgggattttggggaaagaaggacttaaagcagggatcgaa
gctggaaatattaacataacctctgaaattctgatctttttttttttttttttttcaaac
aggttaagaaatatcctgtcagtcgtcggtactgatgccttgaaaaagaccaaaaaggat
gatgagaaatctaagaagtccaaagaagagtatcagcaaacctggtaccatgaaggacca
aatagcttgaaggtggcaagactatggattgctaattattcattgcccagggcaatgaaa
cgcttggaagaggcccgactccataaggagattcctgagacaacgaggacctcccagatg
caagagctgcacaagtctctccggtctttgaataatttttgcagtcagattggggatgat
cggcctatctcctactgtcactttagtcccaattccaagatgctggccacagcttgttgg
agtgggctttgcaagctctggtctgttcctgattgcaacctccttcacactcttcgaggg
cataacacaaatgtaggagcaattgtattccatcccaaatctactgtctccttggaccaa
aaagatgtcaacctggcttcttgtgcggctgatggctctgtgaagctttggagtctcgac
agtgatgaaccagtggcagatattgaaggccatacagtgcgtgtggcccgggtaatgtgg
catccttcaggacgtttcctgggcaccacctgctatgaccgttcatggcgattatgggat
ttggaggctcaagaggagatcctgcatcaggaaggccacagcatgggtgtgtatgacatt
gccttccatcaagatggctctttggctggcactgggggactggatgcatttggtcgagtt
tgggacctacgcacaggacgttgtatcatgttcttagaaggccacctgaaagaaatctat
ggaataaatttctcccccaatggctatcatattgcaaccggcagtggtgacaacacctgc
aaagtgtgggaccttcgacagcggcgttgcgtctacaccatccctgctcatcagaactta
gtgactggtgtcaagtttgagcctatccatgggaacttcttgctgactggtgcctatgat
aacacagccaagatctggacgcacccaggctggtccccgctgaagactctggccggccat
gaaggcaaagtgatgggcctagatatttcttctgatgggcagctcatagccacttgctca
tatgacaggaccttcaagctctggatggctgaatag
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