Chlorocebus sabaeus (green monkey): 103220239
Help
Entry
103220239 CDS
T04361
Symbol
CCDC88A
Name
(RefSeq) coiled-coil domain containing 88A
KO
K25392
girdin
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csab03037
]
103220239 (CCDC88A)
Cilium and associated proteins [BR:
csab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103220239 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
103220239
NCBI-ProteinID:
XP_007968767
Ensembl:
ENSCSAG00000014162
LinkDB
All DBs
Position
14:51484886..51615066
Genome browser
AA seq
2027 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLTAGNGTNLDEYVALVDGVFLNQVMLQINPKLE
SQRVNKKVNNDASLRMHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEDIEPLLKNMALHLKRLIDERDEHSETIIELSEERDGLHSLPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAVRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
TTMDSVEGNASKILKIEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIKKELEHYKEKGERAEELEDELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLSKEIGVYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESK
LESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSS
PPLSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQ
AQILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENE
SVIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSAHKNLEVEHRDLED
RYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETVAAEYKKLCGENDRLNHTYSQLLKE
TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQ
DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV
LAGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSAGFRSKQLVNNKDTT
SFEDISPQGVSDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNNQSRPQS
HSSGEFSLLHDHEAWSSSGSSPIQYLKRQTRSSPVLQHKISETLESRHHKIKTGSPGSEV
VTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKDKPVSCGLARSVSGKTP
GDFYDRWTTKPEFLRPGPRKTEDTYFISSAGKPTPGTQGKIKLVKESSLSRQSKDSNPYA
TLPRASSVISTAEGTTRRTSIHDFLTKDSRLPISVDSSPAAADSNTTAASSEYHLHQWSS
DILDSPTHTIGSCAQNDLAIDMPESLYVRARNSRTERSHFLNQTFATIKMPSDAFGMLAK
DSIGPFTVAHSSQPFLSLNTELVSNISGLPPRPVTRITDQASASLDKPAQKENEQFSDHQ
NPSNSNLQFSINSNYLVTPACLCPDDTEAALLVSEDNQTVWYEYGCI
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaaatttttactccccttctggagcagttcatgaccagccccttggtcact
tgggttaaaacgtttggacctctgactgcaggaaatgggaccaaccttgatgaatatgtg
gctttggtggatggggtgttcctgaaccaggtcatgctccaaattaatcctaaattggag
agtcagagagtaaataaaaaagtcaataatgatgcctcacttagaatgcacaatctatcc
attttggtgagacagataaaattttattaccaggagactttgcagcaattgatcatgatg
tcgttgccaaatgtcttaatcattggcaaaaatcccttttctgaacaaggcacagaagaa
gttaaaaaactgcttttacttttattgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaactcataatcaggaaaatgtgtttgacctgcaatggatggaagtgactgat
atgtcgcaggaggacatagaaccactcttgaaaaatatggcattgcatctaaaaagactt
atagatgagagagatgaacattcagagactatcatagaactctctgaagagcgggatggt
cttcattctctaccccatgcctcttcatctgcacagtcaccctgtggttctccaggcatg
aagcgaacagaaagtcgacaacatctgtcggtggaactggcagatgctaaagccaagata
agaaggcttaggcaggaattggaggaaaagactgaacagttgttggattgtaaacaagaa
cttgagcaaatggaaatagaactcaaaaggctgcaacaagagaacatgaatttgctttcg
gatgctcgctctgccagaatgtaccgagatgaattagatgcacttcgagagaaagcagtc
agagttgataagcttgaaagtgaagtcagcagatataaagagagactacatgatattgaa
ttttataaggcaagagttgaggagttaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagaccaactagaaggaactcgtgctcgttctgataaattacatgaatta
gaaaaagagaacttacaactaaaagctaaacttcatgatatggaaatggaacgagatatg
gatagaaaaaagattgaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggatgaatcattacatcttggctgggagctggaacagatatccagaactagt
gaactttccgaagcaccacagaaatccctgggccatgaggtgaatgagttgacatcaagt
agattattgaagttagagatggaaaatcaaagtttgacaaaaactgtagaagagcttcgg
accactatggattctgtagaaggcaatgcttccaaaatcctgaaaattgaaaaagaaaat
caaagactcagtaaaaaggttgaaattcttgaaaatgagattgttcaagaaaagcaaagt
cttcagaattgtcagaatttaagcaaggatctaatgaaggagaaagctcagcttgaaaaa
acaattgaaacactgagagaaaattcagagagacagattaagatattggaacaggaaaat
gaacatctgaatcaaacagtgtcttctttaaggcagcggtcccagataagtgcagaagca
agagtgaaagacattgaaaaagaaaacaaaattctccatgaatccatcaaagaaacaagt
agcaagctaagcaagattgaatttgaaaaaagacaaattaaaaaagaattggaacattat
aaagaaaaaggagaacgagcagaagaacttgaagatgaattgcatcatcttgaaaaggaa
aatgaattgttacagaaaaaaataactaatttaaaaattacttgtgaaaaaattgaggca
ttagaacaagaaaattcagagctggaaagagaaaatagaaaattaaaaaaaacattggat
agctttaaaaatctgacctttcagttagaatccctagagaaagagaattcccaacttgat
gaggaaaacttagagctgcgaaggaatgtagaatctttgaagtgtgcaagcatgaaaatg
gctcagctacagctagaaaacaaagaactggaaagtgaaaaagagcaacttaaaaaaggt
ttggagctcctgaaagcatctttcaagaaaacagaacgcttggaagttagctaccagggt
ttagatatagaaaatcaaagactgcaaaaagctttagagaacagcaataaaaaaatccag
caattagagagtgaactacaagacttagagatggaaaatcaaacattgcaaaaaaaccta
gaagaactaaaaatatctagcaaaagactagaacaactggaaaaagaaaataaatcatta
gagcaagagacttctcaactggaaaaggataagaaacaattggagaaggaaaataagaga
ctccgacagcaagcagaaattaaagataccacattagaagaaaataatgtgaagattgga
aatttggaaaaagaaaacaaaactctatccaaagaaattggtgtatataaagaatcttgt
atccgtctaaaagaactagaaaaagaaaataaggagcttgtgaaaagagcaactattgat
ataaaaacgttggttacactacgtgaggatttggtgagtgaaaaattgaagacccaacag
atgaacaatgatcttgaaaaattaactcatgagcttgagaagatagggttaaataaggag
agactcttacatgatgagcaaagtactgatgacagtaggtataaacttttggaatcaaaa
ttagaatccacccttaagaagtctcttgaaataaaagaagaaaaaattgctgctttagaa
gctcgattagaagaatccacgaattataaccagcaattgcgccaagaacttaaaacagtg
aaaaaaaattatgaagctctcaaacagagacaagatgaggaaaggatggtacagagctct
cctccactatctggtgaagacaacaaatgggagcgagaaagtcaagaaacaactagagaa
cttctgaaagtcaaagacagattaattgaagtagaaagaaataatgctacactgcaagca
gagaagcaagcgttgaaaactcaactgaagcagcttgagacacaaaacaataatttgcag
gctcagattcttgcacttcagaggcagacagtatcattacaggaacagaataccactctt
caaacacagaatgccaagcttcaggttgaaaattctactcttaattcccaaagtacctca
cttatgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaa
tctgtaatcaaagagcgagaagacctaaaatctctctatgattctctgatcaaagatcat
gaaaagctggaacttcttcatgaacgtcaggcttcagagtatgaatctcttatctctaaa
catggaactctgaagtctgcccacaaaaatcttgaggtggaacatagagaccttgaagac
cgttacaatcagttattaaaacagaaaggacaattggaagatttggaaaaaatgctcaaa
gtagaacaggaaaaaatgctgcttgaaaataaaaaccatgaaacggtagctgcagaatac
aagaaactttgtggtgaaaatgataggttgaatcatacctatagtcaacttttaaaagag
actgaagttttacaaactgaccataaaaatttgaaaagtcttctgaataattccaaactg
gaacaaacaagattagaagctgaattttcaaagctaaaggaacaataccaacaactggat
attacatcaaccaagctgaataaccagtgtgagttgctaagccaacttaaaggaaattta
gaagaagaaaatcgacatctactagatcaaattcagacattaatgctacagaacagaaca
cttttggagcagaatatggaaagcaaggatctttttcatgttgaacaaagacagtacatt
gataagttaaatgaattaagacgtcagaaggagaaattagaagagaaaattatggatcaa
tacaaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatg
agaaaattgataaagtctaagaaagatattaatcgggaacgccagaaatctctaacatta
acacctacccgctcagactccagtgaaggatttcttcagctccctcatcaagacagtcaa
gatagttcttcagtaggttcaaactctttagaagatggccagaccttggggaccaagaag
agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac
aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc
ctagcaggacagtggacaggtagtactgagaatttggaggttcctgatgatatttcaacg
ggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttttca
actgtcaactcttctgcaggcttcagatccaagcagttggttaataataaagatactacg
tcctttgaagacataagtccacaaggtgttagtgatgattctagtacgggatcaagagtt
catgcttcaagaccagccagccttgatagtggcagaacatccactagcaatagcaataat
aatgcttcactacatgaagtcaaagcaggtgcagttaataaccaaagcaggccacaaagc
cacagcagtggagaatttagcctgcttcatgaccatgaggcttggtccagcagtggtagc
agtccaattcagtacttgaaaagacagaccagatcaagtccagtgctccaacacaaaata
tctgaaacactggagagtcgacatcacaaaatcaaaactggttcccctggaagtgaagtt
gttactctacaacagtttttggaagaaagcaataagcttacctcaatacagataaagtcc
tcaagtcaagaaaatcttttagatgaagtaatgaaaagtctatctgtctcttctgacttt
ttgggaaaagacaaaccagttagctgtggtctggccaggtcagtaagtggaaaaacccca
ggggacttctatgatagatggacaactaagcctgagtttttgagacctggtcctcgaaaa
actgaagatacctacttcattagttctgcaggaaaacctacaccaggcactcaaggaaag
ataaaattagtaaaagaatcttctctgtcacgacaatcaaaagatagtaacccttatgcc
actttacctcgtgcaagcagcgtgatctcaactgccgaaggaactacacgaaggacaagc
atccatgattttttgaccaaggacagtagactgcctatatcagttgattcatcaccagct
gctgctgacagcaacactactgcagcatctagtgagtaccatttacaccagtggtcctct
gatatacttgacagcccaacacatactataggttcttgtgcccaaaatgatttagctata
gacatgcctgagtctctatatgtgcgggctagaaattcaagaacagaaaggtcacatttt
ctaaaccaaacttttgccactattaagatgcctagtgatgcattcggaatgttggcaaaa
gatagcatagggccatttactgtggcccattcatctcagccgttcttatccctcaataca
gaattagttagtaacataagtgggttacctcctaggccagtcaccagaataactgaccag
gcttctgcctctttggataaacctgcacagaaagaaaatgaacagttttctgatcatcag
aaccctagtaacagtaacctacagttttctataaatagcaactatcttgtcactcctgca
tgcctctgtcctgatgacacagaagctgcattgttggtttctgaggataatcaaactgtt
tggtatgaatatggttgtatatga
DBGET
integrated database retrieval system
