Chlorocebus sabaeus (green monkey): 103220849
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Entry
103220849 CDS
T04361
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specific factor 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103220849 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103220849 (CPSF3)
03019 Messenger RNA biogenesis [BR:
csab03019
]
103220849 (CPSF3)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103220849 (CPSF3)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103220849 (CPSF3)
U7-dependent histone pre-mRNA processing factors
103220849 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103220849
NCBI-ProteinID:
XP_007969720
Ensembl:
ENSCSAG00000007125
LinkDB
All DBs
Position
14:complement(98174022..98226486)
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCISVKDDSILSVTVDGKTANLNLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggagagcgaccagctgctgatccgacctcttggagctggg
caagaagtaggaagatcatgtattattctggagttcaaaggaagaaaaataatgctggac
tgtgggatccaccctggcctggaaggaatggatgctcttccttatattgatttaattgat
ccagctgagattgatctcctattaattagtcatttccatttggatcactgtggagctctg
ccctggtttctacagaagacaagtttcaaaggaagaacatttatgactcatgccacaaaa
gctatttatagatggcttctttccgattatgtcaaagttagtaacatatcagcggacgac
atgttgtataccgagacggatttggaagaaagcatggacaaaattgaaactatcaacttt
catgaagttaaggaagttgcaggaatcaagttttggtgttaccatgcagggcatgtccta
ggagccgccatgttcatgattgagatcgcaggcgtgaagcttttgtacacaggtgatttc
tcaagacaagaagatagacacttaatggctgctgaaattcctaatattaagcctgatatt
cttatcattgaatctacttatgggacccacatccatgagaaacgtgaagagcgagaggca
agattctgtaacactgtccacgacattgtaaacagaggaggcaggggtctcattcctgtc
ttcgctcttggaagggctcaggagctgctcttgattctggatgagtactggcagaatcac
ccagaactacatgacattccaatatactatgcatcatctttggccaagaagtgtatggca
gtgtaccagacatacgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaaacacatcagtaacctcaagagcatggatcattttgatgacatt
ggtcccagtgttgtcatggcctcccccggcatgatgcaaagtggcttatccagagagtta
tttgaaagctggtgtactgacaagaggaatggtgtcattatagcaggatactgtgtggaa
gggacacttgccaagcacatcatgtctgaacctgaagaaatcactactatgtctggacag
aaattaccactgaaaatgtctgttgattacatttctttctcagctcacacggattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaacgaaatggccagattgaaagcagcactgattcgagaatatgaagataatgatgaa
gttcacatagaggttcataatcctcggaatacagaagcagtgaccttaaacttcagagga
gaaaaactagccaaggttatgggatttttagcagacaaaaaaccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaattatcacatactttctccttgcgacctg
tccaattatactgatttggccatgagcactgtaaagcagacccaagccattccatatact
ggtccctttaatttgctctattaccagctgcagaagttgacaggtgatgtggaagaatta
gaaattcaagaaaaacctgctctgaaagtgttcaaaaatattactgtaatacaagaacca
ggcatggtggtattagaatggctggcaaacccttctaatgatatgtatgcagatacagta
acaactgtgatattggaagttcagtcaaatcccaaaataagaaaaggtgcagtacagaag
gtttctaaaaaattagaaatgcacgtttatagcaagaggttggagatcatgcttcaggac
atatttggagaagactgtataagtgtaaaggacgactctattcttagtgtcacagtggac
gggaaaactgccaaccttaacttggagacacggactgtagaatgtgaagagggaagcgaa
gatgatgaatccctccgagaaatggtggagctggctgcacagagactgtacgaggccctg
acgcccgttcactga
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