Entry |
|
Symbol |
SRF
|
Name |
(RefSeq) serum response factor
|
KO |
|
Organism |
csab Chlorocebus sabaeus (green monkey)
|
Pathway |
csab05166 | Human T-cell leukemia virus 1 infection |
|
Brite |
KEGG Orthology (KO) [BR:csab00001]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
103221471 (SRF)
04022 cGMP-PKG signaling pathway
103221471 (SRF)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103221471 (SRF)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
103221471 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:csab03000]
103221471 (SRF)
Transcription factors [BR:csab03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
103221471 (SRF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
17:complement(28983161..28993465)
|
AA seq |
508 aa
MLPSQAGAAAALGRGSALGGSLNRTPTGRPGSGGGTRGANGGRVPGNGAGLGPGRLEREA
AAAAATTPAPTAGALYSGSEGDSESGEEEELGAERRGMKRSLSEMEIGMVVGGPEASAAA
TGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTG
TQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATG
FEETDLTYQVSESDSSGETKDTLKPAFTVTNLPGTTSTIQTAPSTSTTMQVSSGPSFPIT
NYLAPVSASVSPSAVSSANGTVLKSTGSGPVSSGGLMQLPTSFTLMPGGAVAQQVPVQAI
QVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPT
SGLGDGSLTVLNAFSQAPSTMQVSHSQVQEPGGVPQVFLTASSGTVQIPVSAVQLHQMAV
IGQQAGSSSNLTELQVVNLDTAHSTKSE |
NT seq |
1527 nt +upstreamnt +downstreamnt
atgttaccgagccaagctggggccgcggcggctctgggccggggctcggccctggggggc
agcctgaaccggaccccgacggggcggccgggcagcggcggcgggactcgtggggctaac
gggggccgggtccccgggaatggcgcggggctcgggcccggccgcctggagcgggaggct
gcggcagcggcggcaaccaccccggcgcccaccgcgggggccctctacagcggcagcgag
ggcgactcggagtcgggcgaggaggaggagctgggcgccgagcggcgcggcatgaagcgg
agcctgagcgagatggagatcggtatggtggtcggtgggcccgaggcgtcggcggcggcc
accgggggctacgggccggtgagcggcgcggtgagcggggccaagccgggtaagaagacc
cggggccgcgtgaagatcaagatggagttcatcgacaacaagctgcggcgctacacgacc
ttcagcaagaggaagacgggcatcatgaagaaggcctatgagctgtccacgctgacaggg
acacaggtgctgttgctggtggccagtgagacaggccatgtgtatacctttgccacacga
aaactgcagcccatgatcaccagtgagaccggcaaggcactgattcagacctgcctcaac
tctccagactctccaccccgctcagaccccacaacagaccagagaatgagtgccactggc
tttgaagagacagatctcacctaccaggtgtcggagtctgacagcagtggggagaccaag
gacacactgaagccggcgttcacagtcaccaacctgccgggtacaacctctaccatccaa
acagcacctagcacctctaccaccatgcaagtcagcagcggcccctcctttcccatcacc
aactacctggcaccagtgtctgctagtgtcagccccagtgctgtcagcagtgccaatggg
actgtgctgaagagtacaggcagcggccctgtctcctctgggggccttatgcagctgcct
accagcttcaccctcatgcctggtggggcagtggcccagcaggtcccagtgcaggccatt
caagtgcaccaggccccacagcaggcgtctccctcccgtgacagcagcacagacctcacg
cagacctcctccagcgggacagtgacgctgcccgccaccatcatgacgtcatccgtgccc
acaactgtgggtggccacatgatgtaccctagcccgcatgcggtgatgtatgcccccacc
tcaggcctgggtgatggcagcctcaccgtgctgaatgccttctcccaggcaccatctacc
atgcaggtgtcccacagccaggtccaggagccaggtggcgtcccccaggtgttcctgaca
gcatcatctgggacagtgcagatccctgtttcagcagttcagctccaccagatggctgtg
atagggcagcaggccgggagcagcagcaacctcaccgagctacaggtggtgaacctggac
accgcccacagcaccaagagtgaatga |