Chlorocebus sabaeus (green monkey): 103221826
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Entry
103221826 CDS
T04361
Symbol
DHX16
Name
(RefSeq) DEAH-box helicase 16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103221826 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csab03041
]
103221826 (DHX16)
Enzymes [BR:
csab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103221826 (DHX16)
Spliceosome [BR:
csab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103221826 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
103221826 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
SecA_DEAD
Flavi_DEAD
nSTAND3
SRP54
Cas3-like_C_2
GIPC1_GH2
Motif
Other DBs
NCBI-GeneID:
103221826
NCBI-ProteinID:
XP_007971418
Ensembl:
ENSCSAG00000008258
UniProt:
A0A0D9R7C7
LinkDB
All DBs
Position
17:41780965..41801310
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AA seq
1044 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYRLLEDSEESSEETVSRAGSSLQK
KRKKRKHLRKKREEEEEEEEEEASEKGKKKTGGSKQQTEKPESEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEFLFGDVELSRHERQELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVL
EEEETIEFVRATQLQGDEEPSAPPTSTQAQQKESIQAVRRSLPVFPFREELLAAIANHQV
LIIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEV
GYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIK
DVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQA
RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA
SANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMH
FDFLDAPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS
EEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQW
CYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRS
GYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK
AKELEDPHAKKMPKKIGKTREELG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggcagggctggagcgctgggttcaggacgagctgcactcggtgttgggg
ctgagcgagcggcacgtcgcccagttcctaatcggtactgcacagcgctgcacgtcggcc
gaggagttcgtgcagcgcctacgagacactgatactttggatctcagtgggccggcccgg
gacttcgccctgagactctggaacaaggtaccacgaaaggcagtggtagaaaagccagcg
cgggcagcagagcgagaggcccgagccctgctggagaagaaccgatcttataggttgttg
gaagacagtgaagagagcagtgaggagactgtgagtagggctggaagcagcctccagaag
aaacgtaaaaaacggaaacacctcaggaagaagcgtgaggaagaggaggaagaagaggag
gaagaggcttctgagaaagggaagaagaaaacaggggggagtaaacagcagacagagaag
ccagagtcagaagatgagtgggaacggacagagcgtgagcgccttcaggacctggaggag
cgtgatgcctttgctgagagggttcgacagcgggacaaggatcgaactcgaaatgtcctg
gagaggtcagacaagaaggcttatgaagaagctcagaagcgcctcaagatggccgaggaa
gaccggaaggccatggtccctgagctgcggaagaaatctcgccgagagtacctggctaag
cgggagcgagagaagcttgaggacctggaggcggagctggctgatgaggagttccttttt
ggggatgtcgagctgagccggcatgagcggcaggagctcaaatataagcggcgagtgcgg
gatctcgcccgggagtaccgggcagctggggagcaggagaagctggaggccaccaatcgc
taccacatgcccaaggaaacccgaggacagccagcccgagctgtggatctagtggaggag
gaatcaggagcccctggggaggagcagcggcgctgggaagaggcgcggcttggggcagca
tccctgaagtttggggcccgagatgctgcctctcaggagcccaagtatcaactggtgctg
gaggaggaggagaccattgagtttgtccgggccactcagctccagggtgatgaggagcca
tcagctccacccacctcaactcaggcccagcagaaagagtccatccaggccgtccgccgc
agcctcccggtgttcccatttcgagaggagctcctagctgctattgcaaatcaccaagtc
ctcatcattgaaggcgagacaggctcagggaagaccacccagatcccgcagtatctcttt
gaggagggttatacaaagaagggtatgaagattgcctgcacccaaccccggagagtggcc
gccatgagtgtagctgcccgagtggcccgggagatgggtgtgaagcttgggaatgaggtt
ggctacagcatccgctttgaggactgcacatcagagcgaactgtcctccgctacatgaca
gatgggatgcttctccgggagttcctctctgagcctgaccttgcgagttacagtgtggtg
atggtggatgaggctcacgaacggaccctacacacagacattctctttggattgatcaag
gatgttgctcgcttccgacctgagctcaaggtcctggtggcttcagccacgctggacact
gcccgtttctccaccttctttgatgacgcccctgtgtttcgaatccccggacgcaggttt
cctgtggacatcttctacaccaaggctccagaggctgactacttggaagcttgtgttgta
tctgtgttgcagatccacgtgacccagccccctggggatatcctggtgttcctgacagga
caggaggagattgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggctcc
aaaatccgggagctcctggtgctgcccatttatgccaacctgccctctgacatgcaggcc
cgtatcttccagcccacgccacctggggcacgaaaggtggttgtggcaacgaacattgct
gagacatcactcaccatcgagggcatcatttatgtactggatccagggttctgtaagcag
aagagctacaacccccgcacaggcatggaatcgctcactgtcacaccctgcagcaaggcc
tcagccaatcagcgagctggcagggcaggtcgagtggctgcagggaagtgcttccgcctg
tataccgcctgggcctatcagcacgagcttgaggaaaccacagtgcctgagatccagagg
accagcttgggcaatgtcgtgttgctgctcaagagcttagggatccatgacctaatgcac
tttgatttcctggatgctccaccatatgagacactgctgctggctttggagcagctgtat
gctctgggagccctcaaccaccttggggagctcactacgtctggtcgaaagatggcagag
ctgccggtggaccccatgctgtccaaaatgatcttagcctctgagaagtacagctgttca
gaggagatcctgacagtggctgccatgctctctgtcaacaactccatcttctaccgacca
aaggacaaggtcgtccatgctgacaatgcccgtgtcaacttctttctccctggtggtgac
cacctggtcctgctaaacgtttacacacagtgggctgagagtggttactcttcccagtgg
tgctatgagaactttgtacagttcagatcaatgcgccgagcccgggatgtgcgggaacag
ctggaagggctcttggaacgtgtggaagttggtctcagttcctgccagggggactatatc
cgtgtacgcaaggccatcactgctggttacttttaccacacggcacggttgactcggagc
ggctaccgcacagtaaaacagcagcagacggtcttcattcatcccaactcctccctcttt
gagcaacagccacgctggctgctctaccacgaacttgtcttgactaccaaagagttcatg
agacaggtactggagattgagagcagttggcttctggaggtggctccccattattataag
gccaaggagctagaagatccccatgctaagaaaatgcccaaaaaaataggcaaaacacga
gaagagctagggtaa
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integrated database retrieval system
