Chlorocebus sabaeus (green monkey): 103222612
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Entry
103222612 CDS
T04361
Symbol
SS18
Name
(RefSeq) SS18, nBAF chromatin remodeling complex subunit
KO
K15623
protein SSXT
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03082
ATP-dependent chromatin remodeling
csab05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103222612 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
103222612 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csab03036
]
103222612 (SS18)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103222612 (SS18)
GBAF(ncBAF) complex
103222612 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
103222612
NCBI-ProteinID:
XP_007972593
Ensembl:
ENSCSAG00000017808
UniProt:
A0A0D9RYZ0
LinkDB
All DBs
Position
18:54477339..54548920
Genome browser
AA seq
418 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPAPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGY
QQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG
QQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggctttcgcagccccgaggcaacgaggcaagggggagatcactcccgctgcg
attcagaagatgttggatgacaataaccatcttattcagtgtataatggactctcagaat
aaaggaaagacctcagagtgttctcagtatcagcagatgttgcacacaaacttggtgtac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
cagaatatgcctatgggtcctggagggatgaatcagagcggccctccccccgctccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacccggaccc
aatcaactcaatatgacaaacagttccatgaatatgccttcaagtagccatggatccatg
ggaggttacaaccattctgtgccatcatcacagagcatgccagtacagaatcagatgaca
atgagtcaagggcagccaatgggaaactatggtcccagaccaaatatgaatatgcagcca
aaccaaggtccaatgatgcatcagcagcctccttctcagcaatacaacatgccacaggga
ggcggacagcattaccaaggacagcagccacccatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccctatagacctcctcaacagggccca
ccacagcagtactcaggccaggaagactattacggggaccaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcagtattaccctgatggtcataatgattacggttat
cagcaaccgtcgtatcctgaacaaggctacgataggccttatgaggattcctcacaacat
tactacgaaggaggaaattcacagtatggccaacagcaagatgcataccagggaccacct
ccacaacagggatatccaccccagcagcagcagtacccagggcagcaaggttacccagga
cagcagcagggctacggtccttcacagggtggtccaggtcctcagtatcctaactaccca
cagggacaaggtcagcagtatggaggatatagaccaacacagcctggaccaccacagcca
ccccagcagaggccttatggatacgaccagggacagtatggaaattaccagcagtga
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