Chlorocebus sabaeus (green monkey): 103222848
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Entry
103222848 CDS
T04361
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
csab04142
Lysosome
csab04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
103222848 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103222848 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
103222848 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csab02000
]
103222848 (NPC1)
Transporters [BR:
csab02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
103222848 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_N
NPC1_MLD
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
103222848
NCBI-ProteinID:
XP_007972965
Ensembl:
ENSCSAG00000017694
LinkDB
All DBs
Position
18:56956557..57007951
Genome browser
AA seq
1244 aa
AA seq
DB search
MSARGLALGLLLLLLCPAQVFSQSCVWYGECGIAYGDKRYNCEYFGPPKPLPKDGYDLVQ
ELCPGFFFGNVSLCCDVQQLQTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQF
LNVTATEDYVDPVTNQTKTNVKELQYFVGQSFANAMYNACRDVEAPSSNDKALGLLCGKD
ADACNATNWIEYMFNKDNGQAPFTITPVFSDFPVHGMEPMNNATKGCDESVDEVTAPCSC
QDCSIVCGPKPQPPPPPAPWTILGLDAMYVIMWITYMAFLLVFFGAFFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGEASCCDPVSAAFEGCLRRLFTRWGSFCVRNPGCVIFFSLVF
IAVCSSGLVFVRVTTNPIDLWSAPSSQARLEKEYFDQHFGPFFRTEQLIIRAPLTDKHTY
QPYPSGADVPFGPPLDIQILHQVLDLQIAIENITASYNNETVTLQDICLAPLSPYNMNCT
IMSVLNYFQNSHSVLDHKKGDDFFVYADYHTHFLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDGKFINLVRNYRNPNLTISFSAERSIEDELNRESDSDIFTVVISYAIMFL
YISLALGHIKSCRRLLVDSKISLGIAGILIVLSSVACSLGIFSYIGLPLTLIVIEVIPFL
VLAVGVDNIFILVQAYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSV
MPAVHTFSLFAGLAVFIDFLLQITCFVSLLGLDINRQEKNRLDIFCCVRGAEDGTSVQAS
ESCLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIAVLNKVDIGLDQFLSMPDDSYVV
DYFKSMSQYLHAGPPVYFVLEEGHDYTSPKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYT
RIGFAPSSWIDDYFDWVKPQSSCCRVDNITDQFCNASVVDPACVRCRPLTPEGKQRPQGG
DFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGTRVGATYFMTYHTVLQTSADFIDA
LKKARLIASNVTKTMGINGSAYRVFPYSVFYVFYEQYLTIIDDTIFNLGVSLGAIFLVTM
VLLGCELWSAVIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRA
FTVSTKGSRVERAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVL
LGATHGLIFLPVLLSYIGPSVNKAKSCATEERYKGTERERLLNF
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctcgcggcctggcccttggcctcctcctgctgctactgtgtccggcgcaggtg
ttttcacagtcctgtgtttggtatggagagtgtggaattgcatatggggacaagaggtac
aattgcgaatattttggcccaccaaaaccattgccaaaggatggatatgacttagtgcag
gaactctgtccaggattcttctttggcaatgtcagtctctgttgtgatgttcagcagctc
cagacactaaaagacaatttgcagctgcctctacagtttctgtccagatgtccctcctgt
ttttataacctattgaacctattctgtgagctgacatgtagccctcgacagagtcagttt
ttgaatgttacagcaactgaagattatgttgatcctgttacaaaccagacgaaaacaaat
gtgaaagagttacagtactttgtcggacagagttttgccaatgcaatgtacaatgcctgc
cgggacgtggaggccccatcaagtaatgacaaggccctgggactcctgtgtgggaaggac
gctgatgcctgtaatgccaccaactggattgaatacatgttcaataaggacaacggacag
gcaccttttaccatcactcccgtgttttcagatttcccagtccatgggatggagcccatg
aataatgctaccaaaggctgtgatgagtctgtggatgaagtcacagcaccgtgtagctgc
caagactgctctattgtctgtggccccaagccccagcccccgcctcctcctgctccctgg
acaatcctcggcttggacgccatgtatgtcatcatgtggatcacctacatggcatttttg
cttgtgttttttggagcattttttgcagtgtggtgctacagaaaacggtattttgtttcc
gagtacactcccatcgatagcaatatagctttttctgttaatgcaagtgacaaaggagag
gcctcctgctgtgaccctgtcagtgcagcatttgagggctgcttgaggcggctgttcaca
cgctgggggtctttctgcgtccgaaaccctggctgtgtcattttcttctcgctggtcttc
attgctgtgtgttcgtcgggcctggtgtttgtccgggtcacaaccaatccgattgacctc
tggtcagcccccagcagccaggctcgcctggagaaagagtactttgaccagcactttggg
cctttcttccggacagagcagctcatcatccgggcccctctcactgacaaacacacttac
cagccatacccttcgggagccgatgtaccctttggacctccgcttgacatacagatattg
caccaggtccttgacttacaaatagccatcgaaaacattactgcctcttacaacaatgag
actgtgacacttcaggacatctgcttggcccctctctcaccatataacatgaactgcacc
attatgagtgtgttaaattacttccagaacagccattccgtgctggaccacaagaaaggg
gatgacttctttgtgtatgctgattaccacacgcactttctgtactgcgtacgggctcct
gcctctctgaatgatacaagtttgctccatgatccttgtctgggtacgttcggtggacca
gtgttcccatggcttgtgttgggaggctatgatggtaagtttattaatttggtgagaaac
tacaggaatcccaatctgaccatttccttcagtgctgaacgaagtattgaagatgaacta
aatcgtgaaagtgacagtgatatcttcaccgttgtaattagctatgccatcatgttccta
tatatttccctagccttggggcacatcaaaagctgtcgcaggcttctggtggattcgaag
atctcactaggcatcgcgggcatcctgattgtgctgagctcggtggcttgctccttgggc
atcttcagctacattgggttgcccttgaccctcattgtgattgaagtcatcccgttcctg
gtgctggctgttggagtggacaacatcttcattctggtgcaggcctaccagagagatgaa
cgtcttcaaggggaaaccctggatcagcaactgggcagggtcctaggagaagtggctccc
agtatgttcctgtcatccttttctgagactgtagcatttttcttaggagcaatgtccgtg
atgccagccgtgcacacgttctctctctttgcgggactggcagtcttcattgactttctt
ctgcagattacctgtttcgtgagtctcttggggttagacattaatcgtcaagagaaaaat
cggctagacatcttttgctgtgtcagaggtgctgaagacggaacaagcgtccaggcctca
gagagctgtttgtttcgcttcttcaaaaactcctattctccacttctgctaaaggactgg
atgagaccaattgtgatagcagtatttgtgggtgttctgtcattcagcatcgcagtcctg
aacaaagtagatattggattggatcagtttctttcgatgccagatgactcctacgtagtg
gattatttcaaatccatgagtcagtacctgcatgcgggtccgcctgtgtactttgtcctg
gaggaagggcacgactacacttctcccaaggggcagaacatggtgtgcggtggcatgggc
tgcaacaacgattccctggtgcagcagatatttaatgcggcgcagctggacaactatacc
cggataggcttcgccccctcgtcctggatcgacgattatttcgactgggtgaagccgcag
tcatcttgctgtcgagtggacaatatcactgaccagttctgcaatgcttcagtggttgac
cccgcctgcgtccgctgcaggcctctgactccagagggcaaacagaggcctcagggtgga
gacttcatgagattcctgcccatgttcctttcggataaccctaaccccaagtgtggcaaa
ggggggcatgctgcctatagctccgcagttaacatcctcggcaatggcaccagggtcgga
gccacgtacttcatgacctaccacactgtgctgcagacctctgctgactttattgatgct
ctgaagaaagcccgacttatagccagtaatgtcaccaaaaccatgggcattaatggcagt
gcctaccgggtatttccctacagtgtgttttatgtcttctacgaacagtacctgaccatc
attgacgacactatcttcaacctcggtgtgtccctgggcgcgatatttctggtgaccatg
gtcctcctgggctgtgagctgtggtctgcagtcatcatgtgcgccaccatcgccatggtc
ttggtcaacatgtttggagttatgtggctctggggcatcagtctgaacgctgtgtccttg
gtcaacctggtgatgagctgtggcatctccgtggagttctgcagccacataaccagagcg
ttcacggtgagcacgaaaggcagccgcgtggagcgtgcagaagaggcactcgcccacatg
ggcagctccgtgttcagtggaatcacgcttacaaaatttggagggattgtggtgttggct
tttgccaaatctcaaattttccagatattctacttcaggatgtatttggctatggtctta
ctgggcgccactcacggattaatatttctccctgtcttactcagttacatagggccatca
gtaaataaagccaaaagttgtgccactgaagagcgatacaaagggacagagcgcgaacga
cttctaaatttctag
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