Chlorocebus sabaeus (green monkey): 103223028
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Entry
103223028 CDS
T04361
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03082
ATP-dependent chromatin remodeling
csab03250
Viral life cycle - HIV-1
csab04714
Thermogenesis
csab05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103223028 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103223028 (SMARCB1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103223028 (SMARCB1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103223028 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csab01009
]
103223028 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103223028 (SMARCB1)
03036 Chromosome and associated proteins [BR:
csab03036
]
103223028 (SMARCB1)
Protein phosphatases and associated proteins [BR:
csab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103223028 (SMARCB1)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103223028 (SMARCB1)
SWI/SNF complex
103223028 (SMARCB1)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103223028 (SMARCB1)
PBAF complex
103223028 (SMARCB1)
SWI/SNF complex
103223028 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
103223028
NCBI-ProteinID:
XP_007973303
Ensembl:
ENSCSAG00000011285
UniProt:
A0A0D9RFV1
LinkDB
All DBs
Position
19:6902985..6945111
Genome browser
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtgaagttccagctggag
gacgacggcgagttctatatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcacgga
tacacaactctagccaccagtgtgaccctgttaaaagcctcggaagtggaagagattctg
gacggcaacgatgagaagtacaaggctgtgtccatcagcacagagccccccacctacctc
agggaacagaaggccaagaggaacagccagtgggtacccaccctgcccaacagctcccac
cacctggatgccgtgccatgctccacgaccatcaacaggaaccgcatgggccgggacaag
aagagaaccttccccctttgctttgatgaccacgacccagctgtgatccacgagaacgca
tctcagcccgaggtgctggtccccatccggctagacatggagatcgatgggcagaaactg
cgagatgccttcacctggaacatgaatgagaagttgatgacacctgagatgttttcagaa
atcctctgtgacgatctggatttgaacccgctgacgtttgtgccagctatcgcctccgcc
atcagacaacagatcgagtcctatcccacggacagcatcctggaggaccagtcagaccag
cgcgtcatcatcaagctgaacatccatgtgggaaacatttccctggtggaccagtttgag
tgggacatgtcagagaaggagaactcgccagagaagtttgccctgaagctgtgctcggag
ctggggttgggcggggagtttgtcaccaccatcgcatacagcatccggggacagctgagc
tggcatcagaagacctacgctttcagtgagaaccctctgcccacagtggagattgccatc
cggaacacgggcgatgcggaccagtggtgcccgctgctggagactctgacagacgccgag
atggagaagaagatccgcgaccaggacaggaacacgaggcggatgaggcgtcttgccaac
acagccccggcctggtaa
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