Chlorocebus sabaeus (green monkey): 103223631
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Entry
103223631 CDS
T04361
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat containing 6B
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103223631 (TNRC6B)
03036 Chromosome and associated proteins [BR:
csab03036
]
103223631 (TNRC6B)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103223631 (TNRC6B)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103223631 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
103223631
NCBI-ProteinID:
XP_007974519
Ensembl:
ENSCSAG00000006021
LinkDB
All DBs
Position
19:22823447..22907942
Genome browser
AA seq
1771 aa
AA seq
DB search
MEDKKRKKEDKKKKEATQKVTEQKTKVPEVTKPSLSQPTAASPIGSSPSPPVNGGNNAKR
VAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPPPPSCMLLGGGAGPPPCTAPGA
NPNNAQVTGALLQSESGTAPDSTLGGAAASNYANSTWGSGASSNNGTSPNPIHIWDKVIV
DGSDMEEWPCIASKDTESSSENTTDNNSASNPGSEKSTLPGSTTSNKGKGSQCQSASSGN
ECNLGVWKSDPKAKSVQSSNSTTENNNGLGNWRNVSGQERIGPGSGFSNFNPNSNPSAWP
ALVQEGTSRKGALEAENSNSSAQVSTVGQTSREQQSKMENAGVNFVVSGREQAQIHNTDG
PKNGNTNSLNLSSPNPMENKGMPFGMGLGNTSRSTDAPSQSTGDRKTGSVGSWGAARGPS
GTDTVSGQSNSGNNGNNGKEREDSWKGASVQKSAGSKNDSWDNNNRSTGGSWNFGPQDSN
DNKWGEGNKMTSGVSQGEWKQPTGSDELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGN
AQAPCWGRSSSSTGSEVGGQSTGSNHKAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTD
LDPRVLSNTGWGQTQIKQDTVWDIEEVPRPEGKSDKGTEGWESAATQTKNSGGWGDAPSQ
SNQMKSGWGELSASTEWKDPKNTGGWNDYKNNNSSNWGGGRPDEKTPSSWNENPSKDQGW
GGGRQPNQGWSSGKNGWGEEVDQTKNSSWESSASKPVSGWGEGGQNEIGTWGNGGNASLA
SKGGWEDCKRSPAWNETGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWGGPPPPPPGNVR
PSSSSWSSGPQPATPKDEEPSGWEEPSPQSISRKMDIDDGTSAWGDPNSYNYKNVNLWDK
NSQGGPAPREPNLPTPMTGKSASVWSKSTPPAPDNGTSAWGEPNESSPGWGEMDDTGAST
TGWGNTPANAPNAMKPNSKSMQDGWGESDGPVTGTRHPSWEEEEDGGVWNTAGSQGSASS
HNSTSWGQGGKKQMKCSLKGGNNDSWMNPLAKQFSNMGLLSQTEDNPSSKMDLSVGSLSD
KKFDVDKRAMNLGDFNDIMRKDRSGFRPPNSKDMGTTDSGPYFEKLTLPFSNQDGCLGDE
APCSPFSPSPSYKLSPSGSTLPNVSLGAIGTGLNPQNFAARQGGSHGLFGNSTAQSRGLH
TPVQPLNSSPSLRAQVPPQFISPQVSASMLKQFPNSGLSPGLFNVGPQLSPQQIAMLSQL
PQIPQFQLACQLLLQQQQQQQLLQNQRKISQAVRQQQEQQLARMVSALQQQQQQRQPGMK
HSPSHPAAGPKPHLDNMVPNALNVGLPDLQTKGPIPGYGSGFSSGGMDYGMVGGKEAGTE
SRFKQWTSMMEGLPSVATQEANMHKNGAIVAPGKTRGGSPYNQFDIIPGDTLGGHTGPAG
DSWLPAKSPPTNKIGSKSSNASWPPGIVQEMLFQDSICFVIVSFRFRIHCFCDSCLTAKF
PDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTPLPRPPPGLTNPKPSSPWSSTAPRSV
RGWGTQDSRLASASTWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLTFHLNLT
QGTALIRYSTKQEAAKAQTALHMCVLGNTTILAEFATDDEVSRFLAQAQPPTPAATPSAP
AAGWQSLETGQNQSDPVGPALNLFGGSTGLGQWSSSAGGSSGADLAGASLWGPPNYSSSL
WGVPTVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaagaaagaggataaaaagaaaaaagaagccactcagaaggtc
acggaacaaaaaaccaaagtgcccgaagtgacgaaaccaagtttaagccaaccaacggcc
gccagcccaattggcagctctccatcgccaccagtcaatggtggcaacaatgccaaaagg
gtggcagtgccgaacggacaaccgccaagcgccgcccgctacatgcctcgggaggtgccg
ccgcgattccgttgccagcaggaccacaaagtgttactaaaacgtgggcagccccctcca
ccgtcctgcatgctccttgggggtggggcagggcctcctccctgcacagcacctggagca
aacccaaacaacgcacaagtgacaggagcgctgctgcagagtgagagtgggactgcgcca
gactcaacccttggaggtgctgctgcttcaaattatgcaaattccacttggggctcggga
gcctcctccaacaacggcacctcccccaacccaattcacatctgggacaaggtgattgta
gacgggtctgacatggaagagtggccttgtattgccagcaaagacactgaatcttcttcc
gaaaacaccaccgataacaacagtgcctcgaaccctggctctgagaagagcactctgcca
ggaagcaccactagtaacaaaggaaaagggagccagtgccagtctgcaagttctgggaac
gaatgtaatcttggggtctggaaatctgaccctaaggctaaatctgttcaatcttccaac
tcaactacagagaacaacaatggactaggaaattggaggaatgtgagtggtcaggaaaga
attggacctggctctggcttcagcaactttaacccaaatagcaacccatctgcctggcca
gcactggtccaagaaggaacttctaggaaaggggcattggaagcagagaatagtaattcc
agtgcacaggttagcacagtaggtcagacatccagggaacagcagtcaaagatggaaaat
gcgggtgttaattttgttgtctctggcagagaacaggctcaaattcataacactgatgga
ccaaaaaatggaaacactaactccttgaacttaagttcaccaaaccccatggagaataag
ggaatgccctttggaatgggcttggggaacacctccaggagcactgatgccccttcacaa
agcactggagatcgaaagactgggagtgttggatcttggggtgcagctagggggccttct
ggaactgacacagtctctggacaaagcaattctggaaacaatgggaacaatggaaaagag
agagaggactcctggaaaggagcttctgttcagaaatcagctgggtcaaaaaatgactct
tgggacaacaataacaggtctacgggtgggtcctggaactttggcccccaggactctaat
gacaacaaatggggtgaagggaacaaaatgacatctggggtctctcagggagaatggaaa
cagccgactgggtctgatgagttgaaaattggagaatggagtggtccaaaccaaccaaat
tctagcactggagcatgggacaatcaaaagggccaccccctccctgaaaaccaaggcaat
gcccaggctccctgttggggaagatcttccagctccacaggaagtgaagttggaggtcaa
agcactggaagcaaccacaaagcaggaagtagcgacagtcataactctggccgtcggtcg
tacaggcccacacatcctgattgtcaggctgtcttgcagactcttttgagccgaactgat
ttggaccccagggtgctctcaaacactggctggggccaaactcaaattaagcaggacaca
gtgtgggacattgaagaggtgccaaggcctgaggggaaatctgacaaaggaactgagggg
tgggagagcgctgccacacagaccaagaactcagggggctggggagatgcacccagccaa
agcaatcaaatgaagtctggatggggggagctctcagcctctacagagtggaaagacccc
aagaacacaggaggctggaatgactacaagaacaacaactcttccaactggggaggagga
cggcctgatgaaaagacaccttcctcttggaatgagaatcccagcaaggatcaggggtgg
ggaggtggacgccagcccaatcaaggatggtcttctgggaagaacggttggggagaggaa
gtcgatcagacgaaaaacagcagttgggaaagttctgcaagtaaacctgtgtctgggtgg
ggtgaaggagggcagaatgaaatcggaacctggggtaatggtggcaatgcaagcctagct
tcaaaaggtgggtgggaggattgcaaaagatccccagcatggaatgagacaggccgacag
cccaattcctggaataaacaacaccaacagcagcagcccccacagcagccaccgccacca
caaccagaggcttctggttcgtggggaggccctcccccaccacctccaggcaacgttcga
ccttccagttccagctggagcagcgggccacagcctgcaacccctaaggatgaggaaccc
agtggttgggaagagccatccccacagtcaattagtcggaaaatggacattgatgatggc
acttcagcatggggagaccctaacagttacaactacaagaatgtgaatctgtgggataag
aattcccaagggggcccggcacctcgagaaccaaacctgcccaccccaatgaccggtaaa
tcggcatcagtctggagcaaaagcacaccacctgctccagataatggtacttccgcttgg
ggtgagccaaatgaaagcagtcctgggtggggcgagatggatgatacaggagcatcgacc
acaggctgggggaacacgcccgccaacgctcccaatgccatgaagcctaattccaaatct
atgcaagacggctggggggagagtgacgggccagtcacaggaactcgtcaccccagctgg
gaagaggaggaggatggaggagtctggaacaccgctggctctcagggcagtgcctcctcc
cacaactcaacaagctggggacaaggaggaaagaaacagatgaagtgctcactcaaagga
ggaaacaatgattcatggatgaatcctcttgccaaacagttttcaaatatgggattgctg
agtcagactgaagataatccaagcagcaaaatggatttgtctgtaggaagcctttcagat
aaaaaatttgatgtggacaagcgagcgatgaatctcggggattttaatgatatcatgagg
aaggatcgatctgggttccgtccacctaattccaaagacatgggaaccacagatagtggg
ccttattttgagaagctgactttgcctttctccaatcaagatgggtgccttggggatgag
gctccctgctctcccttctccccttctcccagctacaagctgtctccctctggttccaca
ctacccaacgtcagccttggagcaatcggcacagggctcaacccccaaaacttcgctgct
agacaaggcggtagtcatggtttgtttggaaacagcacagcacaatcgagaggtctgcac
acaccagtgcagccactaaattcttctcccagtctccgggcgcaagtgcctccccagttt
atttccccccaggtttctgcctcaatgctcaagcagtttcccaacagtggcctgagtcca
ggtcttttcaatgtggggccccagttatctcctcaacaaattgccatgctgagccagctt
ccacaaattccccagtttcagttggcatgtcagcttctcttgcagcagcagcaacagcag
cagttgttacagaaccagagaaagatttctcaagctgtacgccaacagcaagagcagcag
ctggctcgaatggtgagtgcactgcagcagcagcagcagcagaggcagccgggcatgaag
cactcgccctctcatcctgctgctggacccaagccgcatctggacaacatggtccccaac
gcgctgaatgtggggctcccagaccttcaaaccaaagggccaatacctggatatggttct
ggcttcagctctggcggcatggactatggcatggttggtgggaaggaggctggaactgag
tctcgctttaaacagtggacctccatgatggaggggctgccctctgtagccacacaggaa
gccaatatgcacaaaaatggcgctatagtggcccctggtaagacccggggagggtcaccg
tacaaccagtttgatatcatccctggtgacacactgggtggccatacgggtcctgctggt
gatagctggttacctgccaaatctccaccaacaaataaaatcggaagtaaatccagcaat
gccagctggcctccaggtattgtccaggaaatgcttttccaggatagcatttgttttgta
attgtgagtttcaggttcagaatacattgcttttgtgactcatgtcttacagcaaagttc
cctgattacaaatcaacatggtccccagatcccataggacacaaccccactcatctctcc
aacaagatgtggaaaaaccatatttcctccaggaacactacaccgctgccccgcccacct
cctggtctgaccaaccccaaaccatcatctccctggagcagcacagcaccccgatcagtc
agggggtgggggacacaggactcacggctcgcctcggcctctacctggagtgatggtggc
tcagttcgtcctagttactggctggttcttcacaatctcactccacagattgatgggtca
accttgagaacgatctgcatgcagcatggcccactgctgacattccatctgaatctaacc
cagggcactgccctgatccgatacagcaccaaacaggaggcggccaaggcccaaactgca
ctgcacatgtgtgtgttgggaaacactaccatccttgctgagtttgccactgatgatgaa
gtcagccgctttctggcacaagctcagccccctacacctgcagcaaccccgagtgcgcca
gccgcggggtggcagtcgctggagaccggccagaaccagtcagatcccgtgggacctgct
ctgaatcttttcggtgggtccactgggctcgggcagtggagcagcagcgctggtggcagc
agcggggccgatcttgctggcgcttcattgtgggggcccccaaactattcttctagctta
tggggagtcccaacggtggaagatccccataggatgggcagccctgctcctttactacct
ggtgaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
