Chlorocebus sabaeus (green monkey): 103223722
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Entry
103223722 CDS
T04361
Symbol
COPA
Name
(RefSeq) coatomer protein complex subunit alpha
KO
K05236
coatomer subunit alpha
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csab04131
]
103223722 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csab04147
]
103223722 (COPA)
Membrane trafficking [BR:
csab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103223722 (COPA)
Exosome [BR:
csab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103223722 (COPA)
Exosomal proteins of bladder cancer cells
103223722 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
103223722
NCBI-ProteinID:
XP_007974682
Ensembl:
ENSCSAG00000002563
LinkDB
All DBs
Position
20:3605903..3658555
Genome browser
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSCPLPLTAIVICNRKLDALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPDIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGTIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDISPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQ
FGPYKQLFLQTYARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLEL
GPKPEVAQQTRKILSACEKNPADAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKGQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaagagcgcgcgggtcaaagggctcagctttcaccccaaa
agaccctggatcctgactagtttacataatggggtcatccagttatgggactatcggatg
tgcactctcattgacaagtttgatgaacacgatggtccagtgcgaggcattgacttccat
aagcagcagccactgttcgtctctggaggagatgactataagattaaggtttggaattac
aagcttcggcgctgtcttttcacattgcttgggcacttagattatattcgcaccacgttt
tttcatcatgaatatccctggattctgagtgcctcagatgatcagaccatccgagtgtgg
aattggcaatctagaacctgtgtttgtgtgttaacagggcacaaccattatgtgatgtgt
gctcaattccacccctcagaagacttggtagtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacctgtcccctggtgcggtggaatcggat
gtgagaggaatcactggggttgatctatttggaactacagatgcagtggtgaagcatgta
ctagagggtcatgatcgtggagtaaactgggctgccttccaccccactatgccccttatt
gtatctggggcagacgatcgtcaagtgaagatctggcgcatgaatgaatcaaaggcatgg
gaggttgatacctgccggggccattataacaatgtatcttgtgccgtcttccaccctcgc
caagagttgatcctcagcaattctgaggacaagagtattcgagtctgggatatgtctaag
cggactggggttcagactttccgcagagaccatgatcgtttctgggtcttagctgctcac
cctaaccttaacctctttgcagcaggccatgatggtggtatgattgtgtttaagctggaa
cgggaacggccagcctatgctgttcacggcaatatgctacactatgtcaaggaccgattc
ttacgtcagctggatttcaacagctccaaagatgtagctgtgatgcagttgcggagtggt
tccaagtttccagtattcaatatgtcatacaatccagcagaaaatgcggtcttgctttgt
acgagagctagcaatttagagaatagtacctatgacctgtacaccatccctaaagatgct
gactcccagaatcctgatgcgcctgaagggaaacgatcctcaggcctgacagctgtttgg
gtcgctcgaaatcggtttgctgtcctagatcggatgcactcgcttctgatcaagaatctg
aagaatgagatcaccaaaaaggtacaggtgcccaactgtgatgagatcttctatgccggc
acaggcaatctcctgcttcgagatgcggactctatcacactctttgacgtacagcagaag
cggactctggcatctgtgaagatttctaaagtgaaatatgttatctggtcagcagacatg
tcacatgtagcactactagccaaacacgaacactcatgccctttgcctcttacagccatt
gtgatctgtaaccgcaaactggatgctttatgtaacattcatgagaacattcgtgtcaag
agtggggcctgggatgagagtggggtatttatctataccacaagcaaccacatcaaatat
gctgtcaccactggggaccacgggatcattcgaactctggatttacccatctatgttaca
cgggtgaagggcaacaatgtatactgcctagacagggagtgtcgtccccgggtactcacc
attgatcccactgagttcaaattcaagctggccctgatcaacagaaaatatgatgaggta
ctgcacatggtgaggaatgccaaactagtaggccagtctattattgcttatctccagaag
aagggctatcctgaagtggcactgcattttgtcaaggatgagaaaactcgctttagtctg
gcactggagtgtggaaacattgagattgctctggaagcagccaaagcactggatgacaag
aactgctgggaaaagctgggagaagtggccctgctacagggaaaccaccagattgtggaa
atgtgctatcagcgtaccaaaaactttgacaaactttccttcctgtatcttatcactggc
aatttagaaaaacttcgcaagatgatgaagattgctgagatcagaaaggacatgagtggc
cactatcagaatgccctatacctgggtgatgtgtcagagcgtgtgcggatcctaaagaac
tgtgggcagaagtccctggcctatctcacagctgctacccatggcttagatgaagaagct
gagagcctaaaggagacatttgacccagagaaggagacaatcccagacattgaccctaat
gccaagctgctccagccacctgcacctatcatgccattggataccaattggcctttattg
accgtatccaaaggattttttgaaggcaccattgccagcaaagggaagggaggagcactg
gctgctgacattgacattgacactgttggtacagagggctggggagaggatgcagagcta
caattggatgaagatgggtttgtggaagctacagaaggtttgggggatgatgctcttggc
aagggacaggaagaaggaggtggctgggatgtagaagaagatctggagctccctcctgag
ctggatatatcccctggggcagctggtggggctgaagatggtttctttgtgcccccaacc
aagggaacaagtccaactcagatctggtgtaataactctcagcttccagttgatcacatc
ctggcaggctctttcgaaacagccatgcggctccttcatgaccaagtaggggtaatccag
tttggcccctacaagcaactgttcctacagacatatgcccgaggccgcacaacctatcag
gctctgccctgcctaccctccatgtatggatatcctaatcgcaactggaaggatgcaggg
ctgaagaatggtgtaccagctgtgggcctgaagcttaatgacctcatccaacggttgcag
ctgtgctaccagctcaccacagttggcaaatttgaggaggctgtggaaaaattccgttcc
atccttctcagtgtgccacttcttgttgtggacaataaacaagagattgcagaggcccag
cagctcatcaccatttgccgtgagtacattgtgggtttgtccatggagatagaaaggaag
aagctgcccaaagagactctagaacagcagaagcgcatatgtgagatggcagcctatttc
acccactcaaacctgcagcctgtgcacatgatcctggtgctgcgtacagccctcaatctc
ttcttcaagctcaagaacttcaagacagctgccacctttgctcggcgcctactagaactc
gggcccaagcctgaggtggcgcaacagacccgaaaaatcctgtctgcctgtgagaagaat
cccgcagatgcctatcagctcaattatgacatgcacaacccctttgacatctgtgctgca
tcatatcggcccatctaccgtggaaagccagtggaaaagtgtccactcagtggggcctgc
tattcccctgagttcaaaggtcaaatctgtagagtcaccacagtgacagagattggcaaa
gatgtgattggtttaaggatcagtcctctgcagtttcgctaa
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integrated database retrieval system
