| Entry |
|
| Symbol |
PRDM2
|
| Name |
|
| KO |
|
| Organism |
csab Chlorocebus sabaeus (green monkey)
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:csab00001]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103225565 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:csab03000]
103225565 (PRDM2)
03036 Chromosome and associated proteins [BR:csab03036]
103225565 (PRDM2)
Enzymes [BR:csab01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
103225565 (PRDM2)
Transcription factors [BR:csab03000]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103225565 (PRDM2)
Chromosome and associated proteins [BR:csab03036]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
103225565 (PRDM2)
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
20:complement(118437171..118565554)
|
| AA seq |
1803 aa
MGSAVTYEGRRPAGGRWAKAQGQGPGSGGRGEAGGPGAPQPRSPAGHCRAARRHFRLEPR
WRRRCGGRRGRRNTSGGGGPRRSEARARRARNTTEPAVATETLAEVPEHVLRGLPEEVRL
FPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVKNNVYMWEVYYPNLGWMCIDATD
PEKGNWLRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNPEIAAAI
EEERASARSKRSSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPDFTSANMRDSAEGPKED
EEKPSASALEQPATLQEVASQEVPPELATPAPAWEPQPEPDEQLEAADCEVNDLGEEEEE
EEEEDEEEEEDDELEEEGEEEASMPNESSVKEPEIRCDEKPEDLLEEPKTTSEETLEDFS
EVTPAMQIPRTKEEANGDVFETFMFPCQHCERKFTTKQGLERHMHIHISTVNHAFKCKYC
GKAFGTQINRRRHERRHEAGLKRKPSQTLQPSEDLADGKASGENVASKDELSPPSLGPDC
LIMNSEKASQDTVNSSVVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLIPKGV
RRKGGLEELQPPAEQAQATQNVYVPSTEPEEEGEADDVYIMDISSNISENLNYYIDGKIQ
TNNNTSNCDVIEMESASADLYGINCLLTPVTVEITQNIKTTQVPVTEDLPKEPSGSTNSE
AKKRRTASPPALPKIKAETDSDPMAPSCSLSLPLSISTTEAVSFHKEKSVYLSSKLKQLL
QTQDKLTPPAGISATEIAKLGPVCVSAPASMLPVTSSRFKRRTSSPPSSPQHSPALRDFG
KPSDGKTAWTDAVLTSKKSKLESHSDSPAWSLSGRDERETVSPPCFDEYKMSKEWTASSA
FSSVCNQQPLDLSSGVKQKTEGTGKTPVQWESVLDLSVHKKPCSDSEGKEFKENHSVQPT
CSAVKKRKPTTCMLQKVLLNEYNGIDLPVENPADVTRSPSPCKSLEAQPDPDLGPDSGFP
APTVESLPDVCPSSPALQTPSLSSGQLPPLLIPTDPSSPPPCPPILTVATPPPPLLPTVP
LPAPSSSASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPPVESLMSAASPGPPTLSSS
SSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSGDNLEASLPMMSFKQEELENEGLKPRE
EPQSAAEQDVVQETFNKNFVCNVCESPFLSIKDLTKHLSIHAEDWPFKCEFCVQLFKDKT
DLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKVCTHHQFESGTLRPQNFT
DPSKAHVEHMQSLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHY
PSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILAC
ASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKNAFRRMGQPKRLNFSVELSKMSSS
KLKLNALKKKNQLVQKAILQKNKSAKQKADLKNACESSSHICPYCNREFTYIGSLNKHAA
FSCPKKPLSPPKKKVSHSSKKGGHSSPASSDKNSNSNHRRRTADAEIKMQSMQTPLGKTR
ARSSGPTQVPLPSSSFRSKQNVKFAASVKSKKPSSSSLRNSSPIRMAKITHVEGKKPKAV
AKSHSAQLSSKTSRSLHVRVQKSKAVLQSKSTLASKRRTDRFNIKSRERSGGPVTRSLQL
AAAADLSENKREDGSAKQELKDFSYSLRLASRCSPPAAPYITRQCRKVKAPAAAQFQGPF
FKE |
| NT seq |
5412 nt +upstreamnt +downstreamnt
atgggatccgcggtgacctacgaggggaggcggccggctggtggccgttgggcgaaggcg
cagggtcaagggccgggctccgggggtcgtggggaggctgggggtcccggagccccgcag
ccccgcagccccgcaggccactgccgcgccgcccgacgtcacttccgactggagccaaga
tggcggcggcgctgcggcgggcgccggggccggcggaacaccagtggcggtggcggccct
cgacgctctgaggcgcgggcgcggcgggcgcggaacactactgagcctgcggtggccact
gagaccctggctgaggtacccgaacatgtgctgcgaggacttccggaggaagtgaggctt
ttcccttctgctgttgacaagacccggattggtgtctgggccactaaaccaattttaaaa
ggcaaaaaatttgggccatttgttggtgataagaaaaaaagatctcaggttaagaataat
gtatacatgtgggaggtatattacccaaatttgggatggatgtgcattgatgccactgat
ccagagaagggaaactggctgcgatatgtgaattgggcttgctcaggagaagagcaaaat
ttattcccactggaaatcaacagagccatttactataaaactttaaagccaatcgcgccg
ggcgaggagctcctggtctggtacaatggggaagacaaccctgagatagcagctgcgatt
gaggaagagcgagccagcgcccggagcaagcggagctcccccaagagccggaaagggaag
aaaaaatcccaggaaaataaaaacaaaggaaacaaaatccaagacatacaactgaagaca
agtgagccagatttcacctctgcaaatatgagagattctgcagaaggtcctaaagaagac
gaagagaagccttcagcctcagcacttgagcagccggccaccctccaggaggtggccagt
caggaggttcctccagaactagcaacccctgcccctgcctgggagccacagccagaacca
gacgagcaattagaagcagcagattgtgaggtgaatgatttgggggaagaggaggaggag
gaagaggaggaggatgaagaagaagaagaagatgatgaattggaagaagagggggaagaa
gaagccagcatgccaaatgaaagttctgtgaaagagccagaaatacggtgtgatgagaag
ccagaagatttattagaggaaccaaaaacaacttcagaagaaactcttgaagacttctca
gaggtaacacctgccatgcaaatccccagaactaaagaagaggccaatggtgatgtattt
gaaacgtttatgtttccatgtcagcattgtgaaaggaagtttacaaccaaacaggggctt
gagcgtcacatgcatatccatatatccaccgtcaatcatgctttcaaatgtaagtactgt
gggaaagcctttggcacacagattaaccggcggcggcatgagcggcgccacgaagcaggg
ttaaagcggaaacccagccaaacactacagccgtcagaggacctggctgatggcaaagca
tctggagaaaacgttgcttcaaaagatgaattgagtcctcccagtcttgggccagactgt
ctgatcatgaattcagagaaggcttcccaagacacagtaaattcttctgttgtagaagag
aatggggaagttaaagaacttcatccgtgcaaatattgtaaaaaggtttttggaactcat
actaatatgagacggcatcagcgtagagttcacgaacgccatctgattcccaaaggtgta
cggcgaaaaggaggccttgaagaactccagcctccagcagaacaggcccaggccacccag
aacgtctatgtaccaagcacagagccagaggaggaaggggaagcagatgacgtgtacatc
atggacatttctagcaatatctctgaaaacttaaattactatattgatggtaaaattcaa
actaataacaacactagtaactgtgatgtgattgagatggagtctgcttcggcagatttg
tatggtataaattgtctgcttactccagttacggtggaaattactcaaaatataaagacc
acacaggtccctgtaacagaagatcttcctaaagagccttcgggcagcacaaatagtgag
gccaagaaacggagaacggcgagcccgcctgcactgcccaaaattaaggccgaaacagat
tctgaccccatggccccctcctgctccttaagtcttcctcttagcatatcaacaacggag
gcagtgtctttccataaagagaaaagtgtttatttgtcatcaaagctcaagcagcttctt
caaacccaagataaactaactcctcctgcagggatttcagcaactgaaatagctaaatta
ggtcctgtttgtgtgtctgctcctgcatcaatgttgcctgtgacctcaagtaggtttaag
aggcggaccagctctcctcccagttctccacagcacagtcctgcccttcgagactttgga
aagccaagtgatgggaaaacagcatggaccgatgcagtgctgacttccaaaaaatccaaa
ttagaaagtcatagcgactcaccagcatggagtttgtctgggagagatgagagagaaact
gtgagccctccatgctttgatgaatataaaatgtctaaagagtggacagccagttctgct
tttagcagtgtgtgcaaccagcagccactggatttatccagcggtgtcaaacagaagact
gagggtacaggcaagactccagtccagtgggaatctgtcttagatctcagtgtgcataaa
aagccttgtagtgactctgaaggcaaggaattcaaagagaatcattcagtgcagcctacg
tgtagtgctgtaaagaaaaggaaaccaaccacctgcatgctgcagaaggttcttctcaat
gaatataatggcattgatttacctgtagaaaaccctgcagatgtgaccaggagcccaagt
ccttgtaaatccctagaagctcagccagatcctgacctcggtccggactctggtttccct
gcccctactgttgagtccctacctgatgtttgtccttcatcacctgccctgcagacaccc
tccctttcatccggtcagctgcctcctctcttgatccccacagatccctcttctcctcca
ccctgtcccccgatattaactgttgccactccgccccctcccctccttcctactgtacct
cttccagctccctcttccagtgcatctccacatccatgcccttctccactctcaaatgcc
accgcacagtccccacttccaattctgtccccaacagtgtccccctcaccctctcccatt
cctcctgtggagtccctgatgtctgccgcctcacccgggcctccaacactttcttcttcc
tcctcttcatcttcctcctcctcttcattttcttcttcatcttcctcctcttctccttct
ccacctcctctctccgcgatctcatctgttgtttcctctggtgataatctggaggcttct
ctccccatgatgtctttcaagcaggaggaattggagaatgaaggtctgaaacccagggaa
gagccccagtctgctgctgaacaggatgttgttcaggaaacattcaacaaaaactttgtt
tgcaacgtctgtgaatcacctttcctttccattaaagatctaaccaaacatttatctatt
catgctgaagactggcccttcaaatgtgaattttgtgtgcagctttttaaggataaaacg
gacttgtcagaacatcgctttttgcttcatggagttgggaatatctttgtgtgttctgtt
tgtaaaaaagaatttgcttttttgtgcaatttgcagcagcaccagcgagatctccaccca
gataaggtgtgcacacatcaccagtttgaaagcgggactctgaggccccagaactttaca
gatcccagcaaggcccatgtagagcatatgcagagcttgccggaagatcccttagaaact
tcgaaagaagaagaggagttaaacgattcctctgaagagctttacacgactataaaaata
atggcttctggaataaagacaaaagatccagatgttcgattaggcctcaatcagcattac
ccaagctttaaaccacctccatttcagtaccatcaccgtaaccccatggggattggtgtg
acagccacaaatttcactacacacaatattccacagacttttactactgccattcgctgc
accaagtgtggaaaaggtgtcgacaacatgccggagttgcacaaacatatcctggcgtgc
gcttctgcaagtgacaagaagaggtacacgcctaagaagaacccagtaccattaaaacaa
actgtgcaacccaaaaatggcgtggtggttttagataactctgggaaaaatgccttccga
cgaatgggacagcccaaaaggctaaactttagtgttgagctcagcaaaatgtcgtcgagt
aagctcaaattaaatgcattgaagaaaaaaaatcagcttgtacagaaagcaattcttcag
aaaaacaaatctgcaaagcagaaggctgacttgaaaaatgcttgtgagtcatcctctcac
atctgcccttactgtaaccgagagttcacttacattggaagcctgaataaacacgccgct
ttcagctgtcccaagaaacccctttcccctcccaaaaaaaaagtttctcattcatctaag
aaaggtggacactcatcacctgcaagtagtgacaaaaacagcaacagcaaccaccgcaga
cggacagcggatgcggagattaaaatgcaaagcatgcagactccattgggcaagaccaga
gcccgcagctcaggccccacccaagtcccgctcccctcctcatccttcaggtccaagcag
aacgtcaagtttgcagcttcggtgaaatccaaaaaaccaagctcctcctctttaaggaac
tccagcccgataagaatggccaaaataactcatgttgaggggaagaaacctaaagctgtg
gccaaaagtcattctgctcagctttccagcaaaacgtcgcggagcctgcacgtgagggta
cagaaaagcaaagccgttttacaaagcaaatccaccttggcgagtaagagaagaacagac
cggttcaacataaaatctagagagcggagcggggggccggtcacccgaagccttcagctg
gcggctgctgctgacttgagtgagaacaagagagaggacggcagcgccaagcaggagctg
aaggacttcagctacagcctccgcctggcatcccgatgctctccaccagcggccccgtac
atcaccaggcagtgtaggaaggtcaaagccccggctgcagcccagttccagggaccattc
ttcaaagagtag |