Chlorocebus sabaeus (green monkey): 103226097
Help
Entry
103226097 CDS
T04361
Symbol
PKD1L1
Name
(RefSeq) polycystin 1 like 1, transient receptor potential channel interacting
KO
K04987
polycystin 1L1
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csab03037
]
103226097 (PKD1L1)
04040 Ion channels [BR:
csab04040
]
103226097 (PKD1L1)
Cilium and associated proteins [BR:
csab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103226097 (PKD1L1)
Ion channels [BR:
csab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103226097 (PKD1L1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
PKD_channel
Glyco_trans_2_3
Motif
Other DBs
NCBI-GeneID:
103226097
NCBI-ProteinID:
XP_007979564
LinkDB
All DBs
Position
21
Genome browser
AA seq
2941 aa
AA seq
DB search
MLISSPMGAACLQTGWRGLIAALPLLSLVQPTLGTSSKDEDVGRSWSADCDTRDQLAQDM
AEEAAQNIPGDQERCLQAACCLSFGGELSVSTDKSWGLHLCSCSPPGGGLWVEVYANHVL
LMRDGKCDCPRCALKTKAEDRESQSPSSLPSGQKNIWKTTSKAALSVVNEKTQAVVNEKT
QVPLDCDHSADRIPHKPSIIIARVWSSGVPRFHHRRLCATGTTDSTFSGLLQVQGTSSAA
APCSLKMEASCCVLRLLCCAEDTATGLLPGTVTMETPTKVARPTQTSSKRVPLWPISHFP
ISPRSSHSLPPGTPRTPSFMALQSGSEILYPPTQHPPVAILAQNSENSMNPVLDCSLEME
ARAPPNLGFRVHMASGEALCLMMDFGDSSGVEMRLHNMSEAMAVTAYHRYSKGKYFFLLL
HFQLNVSTYKEAETKNMTLKVYLCQSENSCQEDSDPSNLGYELISAFVTKGVYMLKAVIY
NEFHGTKVELGPYYVEIGHEAVSAFMNSSSVHEDEVLVFTDSQVNQKSTVVIHHFPSISS
YHVSFISQTQVGDSQAWHSITVWYRMQSVSVYTNGTVFATDTDITFTAVTKETIPLEFEW
YFGEDPPVRTTSRSIKKRLSNPQWYRVMVKASNRISSVVSEPHVIRVQKKIVANRLMSPS
SALVNASVAFECRINFGTDVAYLWDFGDGTVSLGSSSSSHVYSREGEFTVEVLAFNDVSA
STLRKQLFIVCEPCQPPLVKNMGPEKVQIWRSQPVRLGVTFEAAVFCDISHGLSYTWNLM
DSEGLPVSLPAAVDTRRQTLILPSHTLEYGNYTVLAKVQIEGSVVYSNYCVGLEVRAQDP
VSVISEGTHLFFSRTTSSPIVLRGTESFDPDNPGATLRYHWECATASSPAHPCFDSSTAH
QLDATAPTVSFEAQWLSDSYDQFLVMLRVSSGSRNSSEARVFLSPYPDSALRFIHISWVS
FKDTFVNWNDELSLQATCEDCSEISNLSYSWDLFLVNATEKNRIEVPFCRVVGLLGSLGL
GAISKSSQSNLLPTEPGTVNPDATTTPFSWEPSLVTLGQPAPSVPRGTPTEPMTGVYWIP
AAEDSAVLGEAPEEGSLDLESGPQSKGSLMTGPSERSQPTHSPSPHLSDFEAYYSDIQEA
IPSGGRQPAKDTSFPESGPSLSAEESPGDGDNLVDSSLSAGRAKPVLMIDWHKALLSRAV
FQGYSSSGVTEQTVTIKPYSLNSGETYVLQASVASKHGLLGKTQLYLTVNPAPRDMVCQV
QPHHGLEAHTVFSVFCMSGKPDFHYEFSYQIGNASKHTLYHGRDTQYYFVLPAGEHLDNY
KVMVSTEITDGKGSKVQPCTVVVTVLPRYHGNDCLVEDLYDSSLKNLSTLQLMGSYTEIR
NYITVITRILSRLSKEDKTASCHQWSRIQDALISSVCKLAFVDQEEMIGSVLMLRDLVSF
SNKLSFMSAVLIFKYTRALLAQGQSSGPFVVDKGVRLELIGLISRIWEVSEQGNSKEEGY
LHEEGITVISDLLLGCLPLNHVSTGQMEFQTLFHYNLQSSVQSLGSVQVHLPGDLAGHNP
AGAGTQSPCYISQLILFKKNPYPGGQAPGQIGGVVGLNLYTCSSRRPINRQWLRKPVMVE
FGEEDGPDNRRNKTTFVLLRDKVNLHQFTELSENPQESLRIEIEFSKPVTRAFPVMLLVR
FSEKPTPSDFLVKQIYFWDESIVQIYIPAASQKDANVGYLSLLDADYDRKPPNKYLAKAV
NYTVHFQWIRCLFWDKREWKSERFSPQPGTSPEKVNCSYDRLAAFGLLRRKLKASFEVSD
ISKLQSHRENLLPSIFIMGSVILYGFLVAKSRQVDHHEKKKSGYIFLQEAPLPGHQLYAV
VIDTGFRAPARLTSKVYIVLCGDNGLSETKELSCPEKPLFERNSRHTFILSTPAQLGLLR
KIRLWHDSRGPSPGWFISHVMVKELRTGQGWFFPAQCWLSAGRHDGRVERELTCLQGGLG
FRKLFYCKFTEYLEDFHIWLSVYSRPSSSRYLHTPRLTVSFSLLCVYACLTALVATGGQE
QVRLDVSPTLGSFRVGLLCTLLASPGAQLLSLLFRLSKEAPGPARAEPPCPPRGEAQAEA
PQGLNSCGRIPDAQEPCKHPASAIVSGSGRAQRKAASDDGTACPVPKLEAYGADHSGTAL
MGKSHCCPPVTQAPNGGLEGLMPRWSRAPQPWWSSAVWAICGTASLACGLGTGFLGYRFG
QEQCVRWLHLLSLSMVCCVFITQPLMVCLMALGFAWRRRADNHFFTESLREATRDLDSEL
AERSWTRLPLSSSCGIPDCAGEVEKVLAARQQARHLRWAHPPSKAHLKVTRERMRRESRT
QAALRDISMDILMLLLLLGIMYGRFSQDEYSLNQAIRKEFTRNARNSFGGLRNITDWWDW
SLTTLLDSLYPGGSPTTRVPGAQPGALGGKCYLIGSSVIKQLKVFPSHLCKLPRPFSAPT
EDSIPTCSPEGGGPENPYLIDPENQNMTLNGPRGYGARKDCVLSLGRTRPEAHTALSRLR
ASTWIDHSTRAVSVHFTLYNPPTQLFTSVSLSVEILPTGSLVPSSLVESFSIFHSDSALQ
YHLVLPQLVFLALSLVHLCVQLYHMMDKGFLSYWRKPRNWLELSVVGVSLTYYAVSGHLA
TLAGDVTDQFHRGLCLCQAFMDLSLITSWNQRARWLQGILLFLFTLKCIYLPGIRNTMAS
CSSMMRHSLPSIFVAVLAGALMLAALSYLRRFLLTMWALPPGTFTDAFPGLLFHFPRSQK
DSLLGLSKSDQRAMACYLGILFTVSATLCFGMLRGFLMTLPRKRKYFQSKSLVRLKDVTA
YMWEKTLTFLRLETPKLEEAEMVENHNYYLDEFANLLDELLMKINGLSDSLQLPLLENTS
NSTGEARAEESPLVDISSKQATEVRPCKIIYVNFLYSNLSSKGVLVYLFFQIIRSICINI
L
NT seq
8826 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcagcagccccatgggagcagcctgcttgcagacaggctggagggggctgatc
gcagccttgcccctgctctccctggtgcagcccactctggggaccagctcaaaggatgag
gatgtaggaagaagctggtctgctgactgtgatactcgtgaccagcttgcacaggacatg
gctgaggaggcagcccaaaacattcctggtgaccaggaaaggtgtctccaggctgcctgc
tgcctttccttcggtggtgagctgtctgtgagcactgacaagagctggggtcttcatctg
tgcagctgtagccctcctggaggtggactgtgggtcgaggtctatgctaatcacgtgctt
cttatgagggatgggaagtgtgactgtcctcggtgtgctctgaagacaaaggcagaagac
cgggaatcacagagcccatcctcattgccttctgggcagaagaacatttggaaaacaact
agtaaagcagcgttaagtgttgttaatgaaaaaacacaggctgttgttaatgaaaaaaca
caggtgcctctggattgtgatcacagtgctgatagaattccccacaaaccttccattata
atcgcgagggtctggagcagtggtgtccccaggttccatcacaggcggctgtgtgccact
gggaccacggacagcacattctctggccttctccaggtccagggcacctcttctgcagca
gctccctgcagcctgaagatggaggcttcctgctgtgtcctgagactgctgtgctgtgcg
gaggatacggccacggggctgcttcctgggactgtcacgatggagacccccaccaaggtg
gccagacccactcagaccagctccaagcgagtacccctgtggccgatttcccattttccc
atttctcccaggagctcccacagccttccacccggcactcctcgcacccccagcttcatg
gcattgcagtctggttctgagatcctctatccccctactcagcatcctcctgtggccatc
ctagcccaaaattctgaaaactccatgaaccctgttctcgattgctccctggaaatggaa
gctcgggcacctccaaatctgggattccgtgttcatatggcttctggagaggctctctgt
ctgatgatggattttggggacagctctggggtggaaatgaggctacacaacatgtctgag
gcaatggcggtgactgcctaccaccggtactcaaaaggtaagtatttttttcttctttta
cattttcagttgaatgtttccacctacaaagaagcagagacaaaaaacatgactttaaaa
gtttacttgtgccaaagtgaaaacagctgccaggaagactcagaccccagtaaccttgga
tatgagcttatttctgcctttgtcacaaaaggagtctatatgctcaaggctgttatttat
aatgagtttcatggaaccaaagtggagcttggaccttattatgtggagattggccatgag
gccgtgtctgcgttcatgaactccagcagtgtccatgaggatgaagtgcttgtctttact
gactcccaagtgaatcagaaaagcactgttgttatacatcattttccatctatttcttca
tatcacgtgtcctttatttctcagactcaagtgggtgacagccaggcttggcacagcata
actgtctggtataggatgcaatccgtctctgtctacacaaatggaactgtgtttgccaca
gacacagacattacatttacagctgttaccaaggaaacaatacccctggaatttgagtgg
tattttggagaggatccaccagtgaggacaacttcaagaagcattaaaaaaagacttagc
aacccccaatggtatcgtgtgatggttaaggcttccaacaggatcagcagtgtggtctct
gagccccacgtcatcagggtgcagaagaaaattgtggccaatcggctcatgtccccctcc
tcagctctggtaaatgccagtgtggcctttgagtgccggatcaacttcggcaccgatgtt
gcctacctgtgggactttggggatggcaccgtcagcctggggagcagctccagcagccac
gtctacagtagggaaggagaatttacagtggaggtacttgccttcaatgacgtcagtgcc
tccaccctaagaaagcaacttttcatcgtgtgcgagccctgccagccacccttggttaag
aacatggggcctgagaaagttcagatatggaggtctcagcctgtgaggctgggggtgacg
tttgaagcggcagtcttctgtgatatttcccatggtctgtcttacacctggaacttgatg
gactctgaagggctccctgtctccctccctgctgctgtggacactcgcagacagaccctc
atcctcccgagccacaccctggagtatgggaactacactgtccttgccaaggttcagatt
gaaggcagtgtggtgtacagcaactactgtgtgggcctagaggtgcgagcccaggaccct
gtcagtgtgatctccgagggcacacacctgttcttctccaggaccacctcatcccccatt
gtcctcagagggaccgagtccttcgaccctgacaaccctggggcaactctcaggtatcac
tgggaatgcgccacggccagctccccagcacatccctgcttcgactcctccactgcacac
caactggacgccactgctcccactgtttcctttgaggcacaatggctcagtgacagctat
gatcagttccttgtgatgctgagggtctccagtggtagccggaactcttctgaggcccgg
gtgttcctgtccccctaccctgactcggcactcagattcatccacatctcctgggtcagc
tttaaagacaccttcgtcaactggaatgacgaactctcccttcaagctacgtgtgaggac
tgcagtgaaatatcgaatctgtcttattcctgggatctctttttagtcaatgccacagaa
aagaataggatagaagttcccttctgcagagtagtgggactgctgggctcgctgggactc
ggtgccatttcaaagtcatcgcagtcaaacctgcttcccactgagcctggcactgtaaat
cctgatgcaacgaccacaccattctcatgggaaccttcactcgtgacccttggccagcct
gctccttcagttccaaggggaacccccacagagcccatgactggagtctactggattcct
gctgcggaggactctgcagtcctgggggaggctccagaggaaggttcactagacctagaa
tcaggaccacagagcaagggatccctgatgactggcccctctgagagaagtcagcccacc
cacagccctagccctcacctctctgattttgaagcctattacagtgatattcaagaagca
ataccgtcgggaggaagacagccagcgaaggacacgagctttccagaatcaggacctagc
ttgagtgccgaggagagccctggagatggggataacctggtggactcctccctgtctgca
ggcagagccaagcctgtcctcatgattgattggcacaaggccctgctgagccgagcagtt
ttccaaggctattcatcctcaggtgttacagaacagacggtgacaatcaagccatactct
ctgaacagtggagagacgtacgtcctgcaagcgtctgtggcttcaaagcacggcttactg
ggtaaaactcagctgtacttgacagtcaacccggctccgcgggacatggtctgtcaggtg
caaccccaccacggtctggaggcacacaccgtcttcagtgtcttctgcatgtctggaaaa
ccggacttccattatgaatttagttaccagataggaaacgcctccaaacacactttgtac
catgggagagacacccagtattattttgtgttgccagctggtgagcacttggacaattac
aaagtcatggtttctactgaaatcacagatggaaaaggctccaaggtccagccgtgcact
gtggtggtgactgtgctgccccgctaccatggaaatgactgtctggtcgaggacctgtat
gattccagcctgaaaaacctgtctaccctccagctgatggggagttacacagaaatcagg
aactacatcactgtgatcaccagaatcctgagtcgtttgtctaaggaggacaaaactgcc
tcctgccaccaatggtcacgaatacaggatgcattaatttcttcagtatgcaaattagct
tttgtagatcaggaagaaatgattggttctgttcttatgttgagggacctcgtgagcttc
tctaataagctaagctttatgagtgcagttctcatcttcaaatatacccgggcgctcctt
gctcagggccagtcctcagggccatttgtggttgacaaaggagtgaggcttgaactcatc
ggtctcatatctagaatctgggaagtctctgagcaaggaaactcgaaggaggaaggctat
ctacatgaagaaggaattacagtcatctcagatttattgttgggttgtctccctttgaac
cacgttagcactgggcagatggagttccagacgctttttcattacaaccttcagagctct
gtccagagcctgggatctgtccaggtgcatttacctggtgaccttgctggacacaatcct
gctggggcggggacacagagcccatgctacattagccagctcatactcttcaagaagaac
ccatatccagggggccaagctcctgggcagattggtggagttgtgggcctcaacctctat
acctgctccagcagaagacccatcaacaggcagtggctaaggaaacccgtgatggtcgag
tttggggaggaagatggcccggataataggagaaataaaacaacatttgtattgcttcgg
gataaagtgaatctccatcagttcactgagctttctgaaaacccgcaggaatctctacgg
atagaaattgaattttccaaacctgttacaagggcatttccagtcatgttgctagtaaga
ttctctgagaaacctactccctctgattttcttgtgaagcagatctacttctgggatgag
tcaattgtgcagatttatatacctgctgcttctcagaaagatgccaatgtaggctattta
tccttattggatgctgactatgacagaaaacctccaaacaaatatttagcaaaggcagtg
aactatacagtacatttccagtggatccgatgcctgttttgggacaagagagagtggaaa
tctgaacgtttctctccacaaccaggaacttctcctgaaaaagtgaactgcagctacgat
cgccttgcggcatttggtctcctaaggagaaagctgaaggccagttttgaagtgagtgac
atttccaagttacagagccaccgagaaaacttgcttcccagtatttttattatgggttct
gtgattctttatggatttttggtcgctaaaagcagacaagtagatcatcatgaaaaaaag
aaatctggttacatctttctgcaagaagcccccttgccaggccaccagctgtatgcggtc
gtcattgacactggcttccgagctccggccaggttgacctcaaaggtgtacattgtttta
tgtggcgacaacggactgtcagaaaccaaggagctctcctgtccagagaagcccctgttt
gaaaggaattccagacacacctttatcctgagcactcctgcccagctgggcctgctgagg
aagattcgcctctggcacgacagccgtgggccttccccaggctggttcatcagccacgtg
atggtgaaggagctgcgcacaggacagggctggttcttccctgcccagtgctggctgtct
gccggcaggcatgatggtcgcgtggagcgggagctcacctgtctgcaagggggactcggc
ttccggaagcttttctattgcaagttcacagagtacctggaggatttccacatctggctg
tcggtgtacagcaggccctcctccagccgctacctgcacacaccacgcctcaccgtgtct
ttctccctgctctgcgtctacgcgtgtctcactgccctggtcgctactggagggcaagag
caggtgaggttggatgtcagccccacccttggatccttcagggtgggtctcctgtgtacc
ctcctcgcttctccaggggcccagctcttgtccctgctcttcaggctcagcaaggaagcc
ccagggcctgcccgagcagagccaccctgcccgcctagaggagaagcacaggccgaggca
ccccagggtcttaattcctgcggaaggataccagacgcacaggagccatgcaagcatcct
gcatcagccattgtctctgggagtggcagggcccaaaggaaggcagcaagtgatgatggc
acagcctgtccagttcctaagctggaggcctacggggctgaccacagcgggactgctctg
atggggaagagccactgctgccctccagttactcaagcacccaacggtggtttggaggga
ctaatgccccggtggtcaagggcccctcagccttggtggagctctgcagtgtgggccatt
tgtgggaccgcttctctggcctgcggtttggggacaggatttctaggctacaggtttggc
caggagcagtgtgtgcggtggctgcacctgctgtccctctccatggtctgctgtgttttc
atcacccagccgcttatggtatgcctcatggccttgggttttgcttggagaagaagagct
gacaaccacttttttactgagtctttacgtgaggctaccagggatctggactctgaattg
gcagaacgttcctggactcgcctccccctctcttcaagctgcggtattcctgactgtgca
ggcgaggttgaaaaagtcttggctgcccgacaacaagctcgccacctgcgctgggcacat
ccaccctccaaggcccatctgaaggtcaccagagagaggatgaggagagagagtcgcaca
caggctgccctgagagacatttccatggacatcctcatgctgcttctgcttttgggtata
atgtatgggaggttttctcaagatgaatactccctcaatcaagctatccggaaagaattt
acaagaaatgccagaaactcctttggtggcctgagaaacatcactgactggtgggactgg
agtctgaccacacttctggacagcctgtacccgggaggctccccaacaacccgtgtgccg
ggggctcagcctggagctcttggaggaaaatgctatctaataggcagttctgtaattaag
caactaaaagtttttcctagccatttatgcaagcttcccaggccattttcagcacccact
gaagactctattcctacatgtagccccgaaggtggaggccctgagaacccctacctgata
gacccagagaaccaaaacatgaccctgaatggtcccaggggctatggggcaaggaaggac
tgtgtgctcagcctgggcagaacaaggcctgaagcccacacagccctgtctcgactcagg
gctagcacgtggattgaccacagcaccagggctgtgtctgtgcacttcaccctctataac
cctccaacccaactcttcaccagcgtgtccctgagcgtggagatcctccctacggggagt
ctcgtcccctcatccctggtggagtcattcagcatcttccacagtgactcagccctgcag
taccacctcgtgcttccccagctggtcttcctggcgctcagcctggtccacctctgtgtt
caactctaccatatgatggataagggcttcctcagctactggcgaaaaccaaggaactgg
ctggagctctccgtggttggagtgagcctcacctactatgcagtttccggccaccttgct
actcttgctggagacgtcactgaccagtttcacagaggactttgcctttgccaagccttt
atggacctcagccttataacatcatggaatcagagggctcgatggctccagggaatcctc
ttattcctcttcacattaaaatgcatctatcttcctggtattcgaaacacaatggcatcc
tgctcctccatgatgcgccactcgctccccagcatctttgtagcagtgctggcgggggcc
ctgatgctggctgccctctcctacctgcgccgatttctgctcactatgtgggctctgcca
cctggtaccttcacagacgccttccccggactgctatttcattttcccagaagccaaaaa
gactccctccttggcctttccaagtctgaccagcgggccatggcttgctaccttggcatc
cttttcacagtctctgccacattgtgttttggaatgctgagaggttttctcatgacttta
ccccgaaaaagaaaatattttcaaagtaaatctcttgtgagacttaaagatgtcactgct
tatatgtgggaaaagaccctcacctttctgagactggaaacaccaaagctggaagaggct
gagatggttgagaatcacaattactacttggatgaatttgcaaatctgttagacgaactt
ctgatgaagattaatggtttgtccgacagcctacaactccctcttctggaaaacacatcc
aacagcacaggggaggcaagggcagaagagagtcccttggtggacatttctagtaaacaa
gctactgaggtaagaccatgcaaaattatttatgtcaattttctttatagcaatttaagt
tctaaaggagttttggtatacttgtttttccaaattataaggtcaatttgcataaatatt
ctctag
DBGET
integrated database retrieval system
