Chlorocebus sabaeus (green monkey): 103226780
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Entry
103226780 CDS
T04361
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03018
RNA degradation
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103226780 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
103226780 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103226780 (LSM8)
03041 Spliceosome [BR:
csab03041
]
103226780 (LSM8)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103226780 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
103226780 (LSM8)
Spliceosome [BR:
csab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103226780 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
103226780
NCBI-ProteinID:
XP_007980894
Ensembl:
ENSCSAG00000010802
UniProt:
A0A0D9REI7
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All DBs
Position
21:86838350..86846675
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AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgccttggagaactacatcaaccgaactgttgccgttattacatctgatggg
agaatgattgtgggaacactgaaaggttttgaccagaccattaatttgattttggatgaa
agccatgagcgagtattcagctcttcacagggggtagagcaagtggtactaggattatac
attgtaagaggtgacaacgttgcagtcattggagaaattgatgaagaaacagattctgcg
cttgatttggggaatattcgagcagagcctttaaattctgtagcacactga
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