KEGG   Chlorocebus sabaeus (green monkey): 103227108
Entry
103227108         CDS       T04361                                 
Symbol
THOC6
Name
(RefSeq) THO complex 6
  KO
K13175  THO complex subunit 6
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03013  Nucleocytoplasmic transport
csab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103227108 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103227108 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103227108 (THOC6)
   03041 Spliceosome [BR:csab03041]
    103227108 (THOC6)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103227108 (THOC6)
Spliceosome [BR:csab03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103227108 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WDR55 Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta NBCH_WD40 WDR54 EIF3I TRM82_WD WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ASA1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st DSE1_N Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_RIG_2nd CFAP251_N Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 103227108
NCBI-ProteinID: XP_007981423
Ensembl: ENSCSAG00000010244
LinkDB
Position
5
AA seq 347 aa
MERAVPLAVPLGQTEVFQALQRLHMTIFSQTVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKNPVMTFQVLHFSLAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEMLKKGCKELW
HRQPPYRTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRVLRGHTDYIHCL
ALRERSPEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMV
CGGGPALTLWHLRSSTPTTVFPIRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVP
GSSPGLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggagcgagctgtgccgctcgctgtaccgctgggtcagacagaggtgttccaggccttg
cagcggctccatatgaccatcttctcccagactgtctcaccctgtgggaagtttctggcg
gctggcaacaattatgggcagattgccatcttcagcttgtctgctgctttgagctccgaa
gctaaagaggaaagtaagaacccggtgatgactttccaagttctgcatttctctttagcc
catgatgggcccgtctatagcatggtctctaccgatcgacatctgcttagtgctggggat
ggggaggtgaaggcctggctttgggcggagatgctcaagaaggggtgtaaggagctgtgg
catcgtcagcctccgtacaggaccagcctggaagtgcctgagatcaatgctctgctgctg
gtccccaaggagaactccctcatcctggctgggggagactgtcagttgcacactatggac
cttgaaactgggactttcacgcgggtcctccggggccacacagactacatccattgcctg
gcactgcgggaaaggagcccagaggtgctgtcaggtggcgaggatggagctgttcgactt
tgggacctgcgcacagccaaggaggtccagacgatcgaggtctataagcacgaggagtgc
tcgaggccccacaatgggcgctggatcggatgcttggcaactgattccgactggatggtc
tgtggagggggcccagccctcaccctctggcacctccgatcctccacacctaccactgtc
ttccccatccgggcgccacagaagcatgtcaccttctaccaggacctgattctgtcggct
ggccagggccgctgtgtcaaccagtggcagctgagcggggagctgaaggcccaggtgcct
ggctcctccccagggctgctcagcctcagcctcaaccagcagcccgccgcgcctgagtgc
aaggtcctgacagctgcaggtaacagctgccgggtggatgtcttcaccaacctgggctac
cgagccttctccctgtccttctga

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