Chlorocebus sabaeus (green monkey): 103228144
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Entry
103228144 CDS
T04361
Symbol
CIITA
Name
(RefSeq) class II major histocompatibility complex transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04612
Antigen processing and presentation
csab05145
Toxoplasmosis
csab05152
Tuberculosis
csab05164
Influenza A
csab05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
103228144 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103228144 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
103228144 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
103228144 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
103228144 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csab01001
]
103228144 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csab04054
]
103228144 (CIITA)
Enzymes [BR:
csab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103228144 (CIITA)
Protein kinases [BR:
csab01001
]
Serine/threonine kinases: Other
TAF1 family
103228144 (CIITA)
Pattern recognition receptors [BR:
csab04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103228144 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
103228144
NCBI-ProteinID:
XP_007983736
Ensembl:
ENSCSAG00000008438
LinkDB
All DBs
Position
5:10341690..10401988
Genome browser
AA seq
1208 aa
AA seq
DB search
MNNFQAILTQVRVLLSSHQPSQVQALLDNLLKEELLSREYHCTLLHEPDSEALARKISLT
LLEKGDLDLALLGWARSGLQPPAAERGPGHSDHDGSSQCATMELGPLEGSYLELLNSDAD
PLCLYHIYDQMDLAGEEEIELYSEPDTDTINCDQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDSQLEGLSKDIFIEHIGPDEVIGDSMEMPAEVGQKSQKRPFPEELPADLKHWKPAE
PPTVVTGSFLVGPVSNSSTLPCLPLPALFNQEPASGRMRLEETNQMPMPSSSSSLSCLNL
PEGPVQFVPTVSTLPQGLWQISGTETGVSSIFIYHGEVPQASQVPPPSGLTVHGLPTSPD
RPGSTSPFAPSATDLPSLPEPALISRANVTEHKTSPTQCQAAGEVSNKLPKWPESVEQFY
RSLQDTYRAEPAGPDGILMEVDLVQARLERSSSKSLERELATPDWAERQLAQGGLAEGLL
AAKERRRPRETQVIAMLGKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDV
YRLQDLLFSLGPRPLVAADEVFSHIVKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEP
CSLRGLLAGLFQKKLLRGCTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMRYF
ECSGMTEHQDRALALLRDRPFLLSHSHSPTLCRAVCQLSEALLELGEDAELPSTLTGLYV
GLLGRAALNGPPGALAELAKLAWELGRRHQSTLQEDQFPSADVRTWAMAKGLVQHSPGAT
ESELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLTGLI
FQPRARCLGALVGPSATAFADRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIW
QHVVQELPARLSFLGTRLMPPDAHVLGKALEAAGQDFSLDLRSTGIDPSGLGSLVGLSCV
THFRAALSDTVALWESLRQHGETELLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRS
SSDDTAGELPAVRDLKKLEFALGPISGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDE
GVSQLSATFPQLKSLETLNLSQNSITDLGAYKLAEGLPSLAASLLRLSLYNNCICDMGAE
SLARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFSVQEHLQQ
QDSRISLR
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttccaggccatcctgactcaggtgcgagtactgctgtccagccatcagccc
agccaggtgcaggccctcttggacaacctgctgaaggaggagctcctctccagggaatac
cactgcaccctgctccatgagcctgatagtgaggctctggccaggaagatctctttgacc
ctactagagaaaggagacctggacttggccctcctggggtgggcccggagtgggctgcag
cccccagcagccgagaggggccctggccacagtgaccatgatggcagctcacagtgtgcc
accatggagttggggccactagaaggcagctacctggagcttctcaacagcgatgctgac
cccctgtgcctctatcacatctatgaccagatggacctggctggagaagaagagattgag
ctctactcagaacccgacacggacaccatcaactgtgaccagttcagcaggctgttgtgt
gacatggaaggcgatgaagagaccagggaggcttatgccaatatcgcggaactggaccag
tatgtgttccaggactcccagctggagggcctgagcaaagacattttcatagagcacata
ggaccagatgaagtgatcggtgacagtatggagatgccagcagaagttgggcagaaaagt
cagaaaagacccttcccagaggagcttccggcagacctgaagcactggaagccagctgag
cccccaactgtggtgactggcagtttcctagtgggaccagtgagcaactcctccaccctg
ccctgcctgccactgcctgctctgttcaaccaggagccagcctccggccggatgcgccta
gaggaaaccaatcagatgcccatgccttcctctagttcctcgttgagctgcctgaatctc
cctgagggacccgtccagtttgtccccaccgtctccactctgcctcaggggctctggcaa
atctctgggactgaaacaggggtctccagtatattcatctaccatggtgaggtgccccag
gccagccaagtaccccctcccagtggactcactgtccatggcctcccaacatctccagac
cgaccaggctccaccagccccttcgctccatcagccactgacctgcccagcctgcctgaa
cctgccctgatctcccgagcaaacgtgacagagcacaagacgtcccccacccaatgccag
gcagctggagaggtctccaacaagcttccaaaatggcctgagtcggtggagcagttctac
cgctcactgcaggacacgtatcgggccgagcctgcaggccccgatggcatcctgatggag
gtggatctggtgcaggccaggctggagagaagcagcagcaagagcctggagcgggaactg
gccaccccggactgggcagaaaggcagctggcccaaggaggcctggctgagggcctgctg
gctgccaaggagcgccggaggccacgtgagacacaagtgattgctatgctgggcaaagct
ggtcagggcaagagctattgggctggggcagtgagccgggcctgggcttgtggccggctt
ccccaatacgactttgtcttctctgtcccctgccactgcttgaaccgtccgggggatgtc
taccgcctgcaggacctgctcttctccctgggcccacggccactcgtggcagccgatgaa
gttttcagccacatcgtgaagagacctgaccgcgttctgctcatcctagacgcctttgag
gagctggaagcgcaagacggcttcctgcacagcacatgcggaccggcaccggccgaaccc
tgctccctccggggcctgctagctggccttttccagaagaagctgctccgaggttgcacc
ctcctcctcacagcccggccccggggtcgcctggtccagagcctgagcaaggcggatgcc
ctgtttgagctgtccgggttctccatggagcaggcccaggcctatgtgatgcgctacttt
gagtgctcagggatgaccgagcaccaagacagagccctggcgctcctccgggaccggcca
tttcttctcagtcacagccatagccccactttgtgccgggcagtgtgccagctctcagag
gccctactggagcttggggaggacgccgagctgccctccacactcacgggactctatgtc
ggcctgctgggccgtgcagccctcaatggccccccgggggccctggcagagctggccaag
ttggcctgggagctaggccgcagacaccaaagtaccctacaggaggaccagttcccatct
gcagacgtgaggacctgggcgatggccaaaggcttagtgcaacactccccaggggccaca
gagtccgagctggccttccccagcttcctcctgcaatgcttcctgggggccctgtggctg
gctctgagtggtgaaatcaaggacaaggagctcccgcagtatctagcattgaccccaagg
aagaagaggccctatgacaactggctggagggcgtgccacgctttctgactgggctgatc
ttccagcctcgcgcccgctgcctgggagccctagtcgggccatcagcgactgccttcgcg
gacaggaagcagaaggtgctagcaaggtacttgaagcggctgcagccggggacactgcgg
gcgcggcagctgctggagctgctgcactgtgcccacgaggctgaggaggctggaatttgg
cagcacgtggtgcaggagctccctgcccgcctctcttttctgggcacccgtcttatgcct
cccgatgcacatgtattgggcaaggccttggaggctgcaggccaagacttctccctggac
ctccgcagcactggcattgacccctctggattggggagcctcgtgggactcagctgtgtc
acccatttcagggctgccttgagcgacacggtggcgctgtgggagtccctgcggcagcat
ggggagactgagctacttcaggcagcagaggagaagttcaccattgaacctttcaaagcc
aagtccctgaaggatgtggaagacctgggaaagcttgtgcagactcagaggacaagaagt
tcctcggacgacacagctggggaactccctgcagttcgggacctaaagaaactggagttt
gcgctgggccccatctcaggcccccaggctttccccaaactggtgcggatcctcacggcc
ttttcctccctgcagcatctggacctggatgcgctgagtgagaacaagatcggggacgag
ggtgtctcgcagctctcagccaccttcccccagctgaagtccctggaaactctcaacctg
tcccaaaacagcatcactgatctgggtgcctacaaacttgccgagggcctgccttcactc
gctgcatccctgctcaggctaagcttgtacaataattgcatctgcgacatgggagccgag
agcctggctcgtgtgcttccggacatggtgtccctccgggtgatggacgttcagtacaac
aagttcacggctgccggggcccagcagctcgctgccagccttcggaagtgtcctcacgtg
gagacgctggcgatgtggacgcccaccatcccattcagtgtccaggaacacctgcaacaa
caggattcacggatcagcctgagatga
DBGET
integrated database retrieval system
