Chlorocebus sabaeus (green monkey): 103228633
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Entry
103228633 CDS
T04361
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03082
ATP-dependent chromatin remodeling
csab04714
Thermogenesis
csab05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103228633 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103228633 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103228633 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103228633 (SMARCC1)
03036 Chromosome and associated proteins [BR:
csab03036
]
103228633 (SMARCC1)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103228633 (SMARCC1)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103228633 (SMARCC1)
PBAF complex
103228633 (SMARCC1)
GBAF(ncBAF) complex
103228633 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
Motif
Other DBs
NCBI-GeneID:
103228633
NCBI-ProteinID:
XP_007984396
Ensembl:
ENSCSAG00000015979
LinkDB
All DBs
Position
22:complement(8987936..9167689)
Genome browser
AA seq
1203 aa
AA seq
DB search
MRMRGLASDTAPVPRGGGAGRPHRKGVGWAGPGSGSGGYARAGARGNERETPRGPGWARL
WGRRAATMAAAAGGGGPGAAVGATGSGTAAAAAGLAVYRRKDGGPATKFWESPETVSQLD
SVRVWLGKHYKKVGSRALGGRETTRLGPEAAAGLAGLGPPLPPRTPRGTTKAGAGPATPP
PSAPGARAPVALTASSTPTFQAQAKCFMDFKAGGTLCHILGSAYKYKNEQGWRRFDLQNP
SRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKA
SHHIYPYSSSQDDEEWLRPVMRKDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKP
WKVHVKWILDTDIFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRDRKASANA
RKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEE
VVLPKNVNLKKDSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSRSVDPGEDNV
TEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNP
QEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADT
PSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGRE
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLA
YQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQ
EAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETD
EGDKAQDGENEKNSEKEQDSEVSEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEIS
EGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMD
REKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQNPQQAHQHSGGPGLAPL
GAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGSMMPGQHMPGRMIPTVAANIH
PSGSGPTPPGMPPMPGNILGPRVSLTAPNGMYPPPPQQQPPPPPPADGVPPPPAPGPPAS
AAP
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatgcgcgggctcgcgtcggatacggcgccagtcccgagagggggcggggccggg
cgtccgcaccggaagggggttggctgggcggggccgggaagcggcagtggcggctacgcg
cgcgcgggcgcgcgcgggaacgaacgggaaacaccgcgagggccggggtgggccaggctg
tggggacgacgggctgcgacgatggccgcagcggcgggcggcggcgggcctggggcagcg
gtaggcgccacaggttcggggacagcggcggcagccgcaggcctagccgtttatcggcgg
aaggatgggggtccggccaccaagttttgggagagcccggagacggtgtcccagctggat
tcggtgcgggtctggctgggcaagcactacaagaaggtgggttcgcgcgcccttgggggc
cgggagaccacgcgactggggccggaggcggcagctggcctcgcgggcctcgggcctccc
ctccccccccgcacgccacgagggacaacaaaggcaggcgccgggcccgccacgcccccg
ccgtccgctccgggcgcccgcgcgccggtggccctcactgcatcttcgaccccgactttc
caggctcaggcaaagtgtttcatggatttcaaagctggaggcaccttatgtcacattctt
gggtctgcttacaagtataaaaatgaacagggatggcggaggtttgacctacagaaccca
tcccgaatggatcgtaatgtggaaatgtttatgaacattgaaaaaacattggtgcagaac
aattgtttgaccagacccaacatctacctcattccagacattgatctgaagttggctaac
aaattgaaagatatcattaaacgacatcagggaacatttacggatgagaagtcaaaagct
tcccaccacatttacccatattcttcctcacaagatgatgaagaatggttgagaccggtg
atgagaaaagacaagcaagtgttagtgcattggggcttttacccagacagctatgatact
tgggtccatagtaatgatgttgatgctgaaattgaagatccaccaattccagaaaagcca
tggaaggttcatgtgaaatggattttggacactgatattttcaatgaatggatgaatgag
gaggattatgaggtggatgaaaataggaagcctgtgagttttcgtcagcggatttcaacc
aagaatgaagagccagtcagaagtccagaaagaagagatagaaaagcatcagctaatgct
cgaaagaggaaacattcgccttcgcctccccctccgacaccaacagaatcacggaagaaa
agtggcaagaaaggccaagctagcctttatgggaagcgcagaagtcagaaagaggaagac
gagcaagaagatctaaccaaggatatggaagacccaacacctgtacccaatatagaagaa
gtagtacttcccaaaaatgtgaacctaaagaaagatagtgaaaatacacctgttaaagga
ggaactgtagcggatctagatgagcaggatgaagaaacggtcacagcaggaggaaaggaa
gatgaagatcctgccaaaggtgatcagagtcgatcagttgaccctggggaagataatgtg
acagagcagactaatcacattattattcctagttatgcatcatggtttgattataactgt
attcatgtgattgaacggcgtgctcttcctgagttcttcaatggaaaaaacaaatccaag
actccagaaatatacttggcatatcgaaattttatgattgacacgtatcgcctaaacccc
caagagtatttaactagcactgcttgtcggaggaacttgactggagatgtgtgtgctgtg
atgagggtccatgcctttttagagcagtggggactcgttaattaccaagttgacccggaa
agtagacccatggcaatgggacctcctcctactcctcattttaatgtattagctgatact
ccctctgggcttgtgcctctgcatcttcgatcacctcaggttcctgctgctcaacagatg
ctaaattttcctgagaaaaacaaggaaaaaccaattgatttgcagaactttggtctacgt
actgacatttactccaagaaaacattagcaaagagtaaaggtgctagtgctggaagagaa
tggactgaacaggagacccttctactcctggaggccctggagatgtataaggatgattgg
aacaaagtgtcggaacatgttggaagtcgtactcaggatgaatgcatcctccactttttg
agacttcccattgaggacccataccttgagaattcagatgcttcccttgggcctttggcc
taccagcctgtcccctttagtcagtcaggaaatccagtcatgagtactgttgcttttttg
gcatctgtggtggaccctcgcgtggcatctgctgcagcaaaagcggctttggaggagttt
tctcgggtccgggaggaggtaccgctggaattggttgaagctcatgtcaagaaagtacaa
gaagcagcacgagcctctgggaaagtggatcccacctacggcctggagagcagctgcatt
gcgggcacagggcccgatgagccagagaagcttgaaggagctgaagaggaaaaaatggaa
gccgaccctgatggtcagcagcctgaaaaggcagaaaacaaagtggaaaatgaaacagat
gaaggtgataaagcacaagatggagaaaatgaaaaaaacagtgaaaaggaacaggatagt
gaagtgagtgaggataccaaatcagaagaaaaggagactgaagagaacaaagaactcact
gatacgtgtaaagaaagagaaagcgatactgggaagaagaaagtagaacatgaaatttcc
gaaggaaatgttgccacagccgcagcagctgctcttgcctcagcggctaccaaagccaag
cacctggctgcagtggaagaaagaaagatcaagtccctggtagctctgttggttgagaca
caaatgaagaaactagagatcaaacttcgacattttgaagagctggaaactatcatggac
agagagaaagaagctctagaacaacagaggcagcagttgcttactgaacgccaaaacttc
cacatggaacagctcaagtatgctgaattacgagcacgacagcaaatggaacagcagcag
catggccagaaccctcaacaggcccaccagcactcaggaggacctggcctggccccactt
ggagcagcagggcaccctggcatgatgcctcatcaacagccccctccttaccctctgatg
caccaccagatgccaccacctcatccaccccagccaggtcagataccaggcccaggttcc
atgatgcccgggcagcacatgccaggccgcatgattcccactgttgcagccaacatccac
ccctctgggagtggccctacccctcctggcatgcctccaatgccaggaaacatcttagga
ccccgggtatccctgacagcacctaacggcatgtatccccctccaccacagcagcagcca
ccaccaccaccacctgcagatggggtccctccgcctcctgctcctggcccaccagcctca
gctgctccttag
DBGET
integrated database retrieval system
