KEGG   Chlorocebus sabaeus (green monkey): 103228907
Entry
103228907         CDS       T04361                                 
Symbol
PRPF39
Name
(RefSeq) pre-mRNA processing factor 39
  KO
K13217  pre-mRNA-processing factor 39
Organism
csab  Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:csab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csab03041]
    103228907 (PRPF39)
Spliceosome [BR:csab03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    103228907 (PRPF39)
SSDB
Motif
Pfam: HAT_PRP39_N HAT_PRP39_C Suf TPR_14 HAT_Syf1_CNRKL1_N HAT_Syf1_CNRKL1_C TPR_16 TPR_MalT
Other DBs
NCBI-GeneID: 103228907
NCBI-ProteinID: XP_007984775
Ensembl: ENSCSAG00000015332
LinkDB
Position
24:22204010..22235740
AA seq 669 aa
MQNSHMDEYRNSSNGSTGNSSEVVVEHPTDFSTEIMNVTEMEQSPDDSPNVNASTEESEM
ASAVDLPVTLTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDR
FFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPG
DPETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQD
AIKNAKSNNESSFYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILNCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAVYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgcaaaattctcacatggatgaatacagaaattctagtaatggcagcacaggcaatagt
tcagaggtagtggtagaacatcctactgatttcagtactgagattatgaatgttacagaa
atggaacagtcacctgatgactctcccaatgtgaatgcatctacagaagaaagtgaaatg
gcaagtgctgtggaccttccagtgacactgacagaaacagaagcaaatttccctccagaa
tatgaaaaattttggaaaactgtggaaaataatcctcaggattttacaggctgggtatat
ttgcttcaatatgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaga
tttttcatacactatccgtattgctatggttactggaaaaagtatgcggaccttgaaaag
cggcacgacaacattaaaccatcagatgaggtttatcggcgggggcttcaggcaatacct
cttagtgttgacctttggatacattatataaacttcttaaaagaaacattggaccctggt
gatcctgagacaaacaatacaataagaggaacttttgagcatgctgttctagctgcagga
acagatttccgttctgacagactgtgggaaatgtatataaactgggaaaatgagcaggga
aacctgagagaagttacagctatatatgatcgtattcttggtattccaacacagctgtat
agtcatcattttcagagatttaaagaacatgtacagaataacttgcctagagatctttta
actggtgaacagtttattcagttgcgaagggagttagcttccgtaaatggacatagtggt
gatgatggtccccctggtgatgatctaccatcgggaattgaagacataactgatcctgca
aagttaattacagaaatagaaaacatgagacatagaatcattgagattcatcaagaaatg
tttaattataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaaga
ccttactttcatgtgaaacctttggaaaaggcacaactaaaaaactggaaggaatactta
gaatttgaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtc
atatcatgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactatacatctcccaaagaaa
cccatggtgcatatgctttgggcagcttttgaggagcagcagggtaatattaatgaagcc
aggaatatcttgagaacatttgaagaatgtgttctagggttggcaatggttcgtttacga
agagtaagtttagaacgacggcatggaaatctggaagaagctgaacatttgcttcaggat
gccattaagaatgccaaatcaaataatgaatcttcattttatgctgtcaaactagcccgg
catcttttcaaaatacagaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatc
gaaagagacaaagagaatacaaagttatacctcaatttacttgaaatggaatatagtggt
gacctcaaacaaaatgaagaaaatatcctaaattgttttgacaaagctgtacatggttca
ttacctattaaaatgagaattacattttctcagagaaaagtggaatttcttgaagatttt
ggttccgatgttaataaacttctgaatgcttatgatgaacatcagacactcctaaaagaa
caggattctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagca
cacacagaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaac
caagctgtatataattatagtgcatggtatcaatacaattatcagaatccttggaattac
ggacaatattatcctccccctccaacctga

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