Chlorocebus sabaeus (green monkey): 103228907
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Entry
103228907 CDS
T04361
Symbol
PRPF39
Name
(RefSeq) pre-mRNA processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csab03041
]
103228907 (PRPF39)
Spliceosome [BR:
csab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103228907 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
103228907
NCBI-ProteinID:
XP_007984775
Ensembl:
ENSCSAG00000015332
LinkDB
All DBs
Position
24:22204010..22235740
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AA seq
669 aa
AA seq
DB search
MQNSHMDEYRNSSNGSTGNSSEVVVEHPTDFSTEIMNVTEMEQSPDDSPNVNASTEESEM
ASAVDLPVTLTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDR
FFIHYPYCYGYWKKYADLEKRHDNIKPSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPG
DPETNNTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPA
KLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKK
PMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNLEEAEHLLQD
AIKNAKSNNESSFYAVKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSG
DLKQNEENILNCFDKAVHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKE
QDSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAVYNYSAWYQYNYQNPWNY
GQYYPPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgaatacagaaattctagtaatggcagcacaggcaatagt
tcagaggtagtggtagaacatcctactgatttcagtactgagattatgaatgttacagaa
atggaacagtcacctgatgactctcccaatgtgaatgcatctacagaagaaagtgaaatg
gcaagtgctgtggaccttccagtgacactgacagaaacagaagcaaatttccctccagaa
tatgaaaaattttggaaaactgtggaaaataatcctcaggattttacaggctgggtatat
ttgcttcaatatgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaga
tttttcatacactatccgtattgctatggttactggaaaaagtatgcggaccttgaaaag
cggcacgacaacattaaaccatcagatgaggtttatcggcgggggcttcaggcaatacct
cttagtgttgacctttggatacattatataaacttcttaaaagaaacattggaccctggt
gatcctgagacaaacaatacaataagaggaacttttgagcatgctgttctagctgcagga
acagatttccgttctgacagactgtgggaaatgtatataaactgggaaaatgagcaggga
aacctgagagaagttacagctatatatgatcgtattcttggtattccaacacagctgtat
agtcatcattttcagagatttaaagaacatgtacagaataacttgcctagagatctttta
actggtgaacagtttattcagttgcgaagggagttagcttccgtaaatggacatagtggt
gatgatggtccccctggtgatgatctaccatcgggaattgaagacataactgatcctgca
aagttaattacagaaatagaaaacatgagacatagaatcattgagattcatcaagaaatg
tttaattataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaaga
ccttactttcatgtgaaacctttggaaaaggcacaactaaaaaactggaaggaatactta
gaatttgaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtc
atatcatgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccat
agcattgaaggagtgaggcatgtcttcagcagagcttgtactatacatctcccaaagaaa
cccatggtgcatatgctttgggcagcttttgaggagcagcagggtaatattaatgaagcc
aggaatatcttgagaacatttgaagaatgtgttctagggttggcaatggttcgtttacga
agagtaagtttagaacgacggcatggaaatctggaagaagctgaacatttgcttcaggat
gccattaagaatgccaaatcaaataatgaatcttcattttatgctgtcaaactagcccgg
catcttttcaaaatacagaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatc
gaaagagacaaagagaatacaaagttatacctcaatttacttgaaatggaatatagtggt
gacctcaaacaaaatgaagaaaatatcctaaattgttttgacaaagctgtacatggttca
ttacctattaaaatgagaattacattttctcagagaaaagtggaatttcttgaagatttt
ggttccgatgttaataaacttctgaatgcttatgatgaacatcagacactcctaaaagaa
caggattctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagca
cacacagaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaac
caagctgtatataattatagtgcatggtatcaatacaattatcagaatccttggaattac
ggacaatattatcctccccctccaacctga
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