Chlorocebus sabaeus (green monkey): 103230424
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Entry
103230424 CDS
T04361
Symbol
TPR
Name
(RefSeq) translocated promoter region, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03013
Nucleocytoplasmic transport
csab05014
Amyotrophic lateral sclerosis
csab05200
Pathways in cancer
csab05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103230424 (TPR)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103230424 (TPR)
09162 Cancer: specific types
05216 Thyroid cancer
103230424 (TPR)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103230424 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103230424 (TPR)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103230424 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Seryl_tRNA_N
Imm70
Crescentin
YwqH-like
Motif
Other DBs
NCBI-GeneID:
103230424
NCBI-ProteinID:
XP_007987347
Ensembl:
ENSCSAG00000013292
LinkDB
All DBs
Position
25:43056605..43120570
Genome browser
AA seq
2439 aa
AA seq
DB search
MPSSGSVSRSRQRGRSMASRGFDGSRRGSLRRAGAREPPSEVVEAAAQASGSSWSSPFFS
ASTPSAAATGAPGPIDMAAVLQQVLERTELNKLPKSVQNKLEKFLADQQSEIDGLKGRHE
KFKVESEQQYFEIEKRLSHSQERLVNETRECQSLRLELEKLSNQLKALTEKNKELEIAQD
RNIAIQSQFTRTKEELEAEKRDLIRTNERLSQELEYSTEDVKRLNEKLKESNTTKGELQL
KLDELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNEILELKC
SLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIK
LSNLYKSAADDSEAKSNELTRAVDELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEMLE
KIGKLEKELENVNDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVE
TQDQLLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSVKLEQAMKE
IQRLQEDTDRANKQSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSA
DISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTSSKITELQLKLE
SALTELEQLRKSRQHQMQLVDSIVRQRDMYRILLSQTTGVAIPLHASSLDDISLASTPKR
PSTSQTVSTPAPVPVIESTEAIEAKAALKQLQEIFENYKKEKAENEKIQNEQLEKLQEQV
TDLRSQNTKISTQLDFASKRYEMLQDNVEGYRREITSLHERNQKLTATTQKQEQIINTMT
QDLRGANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQG
ILERSETETKQRLSSQIEKLEHEISHLKKKLGNEVEQRHTLTRNLDVQLLDTKRQLDTET
NLHLNTKELFKNAQKEIATLKQHLSNMEVQLASQSSQRTGKGQPSNKEDVDDLVSQLRQT
EEQVNDLKERLKTSTSNVEQYRAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQL
EKKLMEVEKEKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQA
RRDCQEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQL
LECKASWEERERMLKDEVSKCVCRCEDLEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNV
SLSEEGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNA
EREKVQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDI
LPLQEANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVH
TKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKETIQKDLDAKIIDI
QEKVKTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVLVQEMQELKETLN
QAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQ
QITEKEEKTRKAIVAAKSKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRITALKS
QYEGRISRLERELREHQERHLEQRDEPQEPSNKVPEQQRQITLKTTPASGERGIASTSDP
PTANIKPTPVVSTPSKVTAAALAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVE
SQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHP
QIEPVNQELSSNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTIEASD
QVSDDTVEMPLPKKLKSVTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYT
PMEDSEETSQSLQIDLGPLQSDQQTTTSSQDGQGKGDDVIVIDSDDEEEDDDENDGEHED
YEEDEEDDDDDEDDTGMGDEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGG
GEGNQRAADSQNIGEGNTGAAESSFSQEVSREQQPSSASERQAPRAPQSPRRPPHPLPPR
LTIHAPPQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPH
RTDGFAEAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEE
ESGGRSVPTTPLQVAAPVTVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGD
EVFVEAESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFR
RVRLQTTLRQGVRGRQFNRQRGVSHAMGGRGGINRGNIN
NT seq
7320 nt
NT seq
+upstream
nt +downstream
nt
atgccctctagtggctcagtgtccagaagccgccaaagaggacgatccatggcatcccgg
ggctttgatgggtcccgccgcgggagtctccggcgggcgggcgcgcgcgagccaccgagc
gaggtggtagaggcggctgcccaggcgtctgggtcctcctggtcttcgcctttcttctcc
gcttctaccccgtcagccgctgccactggggcccctggccccatcgacatggcggcggtg
ttgcagcaagtcctggagcgcacggagctgaacaagctgcccaagtctgtccagaacaaa
cttgaaaagttccttgctgatcagcaatccgagatcgatggcctgaaggggcggcacgag
aaatttaaggtggagagcgaacaacagtattttgaaatagaaaagaggttgtctcacagt
caggagagacttgtgaatgaaacccgggagtgtcaaagcttgcggcttgagctagagaaa
ctcagcaatcagctgaaggcactaactgagaaaaacaaagaacttgaaattgctcaggat
cgcaatattgccattcagagccaattcacaagaacaaaggaagaattagaagctgagaaa
agagacttaattagaaccaatgagagactatctcaagaacttgaatactcaacagaggat
gttaaacgtctaaatgaaaaacttaaagaaagcaatacaacaaagggtgaacttcagtta
aaattggatgaacttcaagcttctgatgtttctgttaagtatcgagaaaaacgcttggag
caagaaaaggaattgctgcatagtcagaatacatggctgaatacagagttgaaaaccaaa
actgatgaacttctggcccttggaagagaaaaagggaatgagattctagagcttaaatgt
agtcttgaaaataaaaaagaggaggtttctagactggaagaacaaatgaatggcttaaaa
acatcaaatgaacatcttcaaaagcatgtggaggatctgttgaccaaattaaaagaggcc
aaggaacaacaggccagtatggaagagaaattccacaatgagttaaatgcacacataaaa
ctttctaacttgtacaagagtgctgctgatgactcagaagcaaagagcaatgaactaacc
cgggcagtggatgaactacacaaacttttgaaagaagctggtgaagccaacaaagcaata
caagatcatcttctagaggtggagcaatccaaagatcaaatggaaaaagaaatgctcgag
aaaatagggaaattggagaaggaattagagaatgtaaatgaccttctttctgccacaaaa
cgtaaaggagccatattgtctgaagaagagcttgcagccatgtctcctactgcagcagct
gtagctaagatagtgaaacctgggatgaaactaactgagctctataatgcttatgtggaa
actcaggatcagttgcttttggagaaactagagaacaaaagaattaataagtacctagat
gaaatagtgaaagaagtggaagccaaagcaccaattttgaaacgccaacgtgaggaatat
gaacgtgcccagaaagctgtagcaagtttatctgttaagcttgaacaagctatgaaggag
attcagcgattgcaggaggacactgatagagccaacaagcagtcctctgtactggagaga
gataatcaaagaatggaaatacaaataaaagatctttcacaacagattagagtgcttttg
atggaacttgaagaagcaaggggtaaccacgtaattcgtgatgaggaagtaagctctgct
gatataagtagttcatctgaggtaatatcacagcatctagtatcttacagaaatattgaa
gagcttcaacaacaaaatcaacgtctgttagtggcccttagagagcttggggaaaccaga
gaaagagaagaacaagaaacaacttcatccaaaatcactgagcttcagctcaaacttgag
agtgccctcactgaactagaacaactccgcaaatcacgacagcatcaaatgcagcttgtt
gattccatagttcgtcagcgtgatatgtaccgtattttattgtcccaaacaacaggagtt
gccattccattacatgcttcaagcttagatgatatttctcttgcatcaactccaaaacgt
ccaagtacatcacagactgtttccactcctgctccagtacctgttattgaatcaacagag
gctatagaggctaaggctgcccttaaacagttgcaggaaatttttgagaactacaaaaaa
gaaaaagcagaaaatgaaaaaatacaaaatgagcagcttgagaaacttcaagaacaagtt
acagatttgcgatcacaaaataccaaaatttctacccagctagattttgcttcgaaacgt
tatgaaatgctgcaagataacgttgaaggatatcgtcgagaaataacatcccttcatgag
agaaatcagaaactcactgccacaactcaaaagcaagaacagattatcaatacaatgact
caagatttgagaggagcaaatgagaagctagctgtcgcagaagtaagagcagaaaatttg
aagaaggaaaaagaaatgcttaaattgtctgaagttcgtctttctcagcaaagggagtct
ttgttagctgaacaaagggggcaaaatttattgctaactaatctgcaaacaattcaggga
atactggagcgatctgaaacagaaaccaaacaaagacttagtagccagatagaaaaactg
gaacatgagatctctcatctaaagaagaagttgggaaatgaggtggaacaaaggcataca
cttactagaaatctagatgttcaacttttagatacaaagagacaactggatacagagaca
aatcttcatcttaacacaaaagaactatttaaaaatgctcaaaaagaaattgctacattg
aaacagcacctcagtaatatggaagtccaacttgcttctcagtcttcacagagaactggt
aaaggtcagcctagcaacaaagaagatgtagatgatcttgtgagtcagctaagacagaca
gaagagcaggtgaatgacttaaaggagagactcaaaacaagtactagcaatgtggaacaa
tatcgagcaatggttactagtttagaagaatccctgaacaaggaaaagcaggtgacagaa
gaagtgcgtaagaatattgaagttcgtttaaaagagtcagctgagtttcagacacagttg
gaaaagaagttgatggaagtagagaaggaaaaacaagaacttcaggatgataaaagaaga
gccatagagagcatggaacaacagttatctgaattgaaaaaaacactttctagtgttcag
aatgaagtacaagaagctcttcagagagcaagcacagctttaagtaatgagcagcaagcc
agacgtgactgtcaggaacaagctaaaatagctgtggaagctcagaataagtatgaaaga
gaattgatgctgcatgctgctgatgttgaagctctacaagctgcgaaggagcaggtttca
aaaatggcatcagtccgtcagcatttggaagaaacaacacagaaagcagaatcacagttg
ttggagtgtaaagcatcttgggaggaaagagagagaatgttaaaggatgaagtttccaaa
tgtgtatgtcgctgtgaagatctggagaaacaaaacagattacttcatgatcagatcgaa
aaattaagtgacaaggtcgttgcctctgtgaaggaaggtgtacaaggaccactgaatgta
tctctcagtgaagaaggaaaatctcaagaacaaattttggaaattctcagatttatacga
cgagaaaaagaaattgctgaaactaggtttgaggtggctcaggttgagagtctacgttat
cgacaaagggttgaacttttagaaagagagctgcaggaactgcaagatagtctaaatgct
gaaagggagaaagtccaggtaactgcaaaaacaatggctcagcatgaagaactgatgaag
aaaactgaaacaatgaatgtagttatggagaccaataaaatgctaagagaagaaaaggag
agactagaacaggatctacagcaaatgcaagcaaaggtaaggaaactggagttagatatt
ttacccttacaagaagcaaatgctgagctgagtgagaaaagcggtatgttgcaggcagag
aagaagctgttagaagaggatgtcaaacgttggaaagcacgtaaccagcatctagtaagt
caacagaaagatccagatacagaagaatatcggaagctcctttctgaaaaggaagttcat
actaagcgtattcaacagttgacagaagaaattggtagacttaaagctgaaattgcaaga
tcaaatgcatctttgactaacaaccagaacttaattcagagtctgaaggaagatctaaat
aaagtaagaactgaaaaggaaaccatccagaaggacttagatgccaaaataattgatatc
caagaaaaagtcaaaactattactcaagtaaagaaaattggacgtaggtacaagactcaa
tatgaagaacttaaagcacaacaggataaggttatggagacatcggctcagtcctctgga
gatcatcaggaacagcatgttttagtccaggaaatgcaggaactcaaagaaacgctcaac
caagctgaaacaaaatcaaaatcacttgagagtcaagtagagaatctgcagaagacatta
tctgaaaaagagacagaagcaagaaatctccaggaacagactgtgcaacttcagtctgaa
ctttcacgacttcgtcaggatcttcaagatagaaccacacaggaggagcagctccggcaa
cagataactgaaaaggaagaaaaaaccagaaaggctattgtagcagcaaaatcaaaaatt
gcacacttagctggtgtaaaagatcagctaactaaagaaaatgaggagcttaaacaaagg
aatggagccttagatcagcagaaagatgaattggatgttcgtattactgctctaaagtcc
caatatgaaggtcgaattagtcgcttggaaagagaactcagggaacatcaagagagacac
cttgagcagagagatgagcctcaagaaccttctaataaggtccctgaacagcagagacag
atcacgttgaaaacaactccagcttctggtgaaagaggaattgccagcacctcagaccca
ccaacagccaatatcaagccaactcctgttgtgtctactccaagtaaagtgacagctgca
gctttggctggaaataagtcaacacccagggcgagtatccgcccaatggttacacctgca
actgttacaaatcccactactaccccaacagctacagtgatgcccactacacaagtggaa
tcacaggaagctatgcagtcagaaggacctgtggaacatgttccagtttttggaagcaca
agtggatccgttcgttctactagtcctaatgtgcagccttctatctctcaacctatttta
actgttcagcaacaaacacaggctacagcttttgtgcaacccactcaacaaagtcatcct
cagattgagcctgtcaatcaggagttatcttcaaacatagtagaggttgttcaaagttca
ccagttgagcggccttctacttccacagcagtatttggcacagtttcggctacccccagt
tcttctttgccaaagcgtacacgtgaagaggaagaggatagcaccatagaagcatcagac
caagtctctgatgatacagtggaaatgcctcttccaaagaagttgaaaagcgttacaccc
gtaggaactgaggaagaagttatggcagaagaaagtactgatggagaggtggagactcag
gtatacaaccaggattctcaagattccattggagaaggagttacccagggagattataca
cctatggaagacagtgaagaaacctctcagtctctacaaatagatcttggaccacttcaa
tcagatcagcaaacaacaacttcatcccaggatggtcaagggaaaggagatgatgtcatt
gtaattgacagtgatgatgaagaagaggatgatgatgaaaatgatggagaacatgaggat
tatgaagaggatgaggaagacgatgatgatgatgaagatgacacagggatgggagacgag
ggtgaagatagtaatgaaggaactggtagtgccgatggcaatgatggttatgaagctgat
gatgctgagggtggtgatgggactgatccaggtacagaaacagaagaaagtatgggtgga
ggtgaaggtaatcagagagctgctgattctcaaaacattggtgaaggaaatacaggtgct
gcagaatcttccttttctcaggaggtttctagagaacaacagccatcatcagcatctgaa
agacaggcccctcgagcacctcagtcacctagacgcccaccacatccacttcccccaaga
ctgaccattcatgctccacctcaggagttgggaccaccagttcagagaattcagatgacc
cgaaggcagtctgtaggacgtgggcttcagttgactccaggaataggtggcatgcaacag
catttttttgatgatgaagacagaacagttccaagtactccaactcttgtggtgccacat
cgtactgatggatttgctgaagcaattcattcaccacaggttgctggtgtccctagattc
cggtttgggccacctgaagatatgccacaaacaagttctagtcactctgatcttggccag
cttgcttctcaaggaggtttaggaatgtacgaaacacccctgttcctagctcatgaagaa
gagtcaggtggccgaagtgttcccactactccactacaagtagcagccccagtgactgta
tttactgagagcaccacctctgatgcttcggaacatgcctctcaatctgttccaatggtg
actacatccactggcactttatctacaacaaatgaaacagcaacaggtgatgatggagat
gaagtatttgtggaggcagaatctgaaggtattagttcagaagcaggcctagaaattgat
agccagcaggaagaagagccggttcaagcatctgatgagtcagatctcccctccactagc
caggatcctccttctagctcatctgtagatacaagtagtagtcaaccaaagcctttcaga
cgagtaagacttcagacaacattgagacaaggtgtccgtggtcgtcagtttaacagacag
agaggtgtgagccatgcaatgggagggagaggaggaataaatagaggaaatattaattaa
DBGET
integrated database retrieval system
