Chlorocebus sabaeus (green monkey): 103230454
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Entry
103230454 CDS
T04361
Symbol
SMG7
Name
(RefSeq) SMG7, nonsense mediated mRNA decay factor
KO
K14409
protein SMG7
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103230454 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103230454 (SMG7)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103230454 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
103230454 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
103230454
NCBI-ProteinID:
XP_007987416
Ensembl:
ENSCSAG00000012654
LinkDB
All DBs
Position
25
Genome browser
AA seq
1235 aa
AA seq
DB search
MCVDPYVYIARECLKPFYLMRNWMFLQIVIVGENVSFKSQMRTENLKSEEHLKSSNIRQA
EVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTL
QGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNK
QTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQL
AILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKA
FIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFS
NETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNESQEESYNAYPLPAVKVSMDWLR
LRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSTSATPLPEEFELQGFLALRPSFR
NLDFSKGHQGITGDKEGQQRRLRQQRLIAIGKWIADNQPRLIQCENEVGKLLFITEIPEL
ILEDPSEAKENLILQETSVIESLAADGSPGLKSVLSTSRNLSNNCDTGEKPVVTFKENIK
PREVNRDQGRSFPPKEVRRDYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVA
VQVKSQTELRKTPVSEARKTPVTQTATQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIP
PPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQG
PQQSQPPSQQPLTSLPAQPTAQSTSQLQVQALTQQQQSPTKAVPALGKSPPHHSGFQQYQ
QADASKQLWNPPQVQGPLGKIMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPF
PMEPYNHNPSEVKVPEFYWDSSYSMADNRSVMAQQANIDRRGKRSPGVFRPEQDPVPRMP
FEDPKSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPS
ELMSHSSSFLSLTGFSLNQERYPNNSMFNEVYGKNLTSSSKAELNPSMAPQETSLYSLFE
GTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRT
ADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGSWTGHGPSMEDSSAVLMESLKSI
WSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtggatccctatgtgtatattgcaagagaatgtcttaaaccattctaccttatg
agaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatttaagtcccag
atgaggaccgaaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcaggca
gaagtcctgaaggctgacatgacagattctaagctgggtccagctgaagtctggacatcc
aggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgcttta
gacaagaaagtagaacaggatctctggaatcacgcctttaagaatcagatcacaacacta
caaggccaggcaaagaatcgagcaaatccgaatcgaagtgaagttcaggcaaacctttct
ctgttcctagaggcagctagtggcttctatacccagttgttacaagaactgtgtacagta
tttaatgtagatttaccatgccgtgtgaagtcttcccaattgggaattatcagcaataaa
cagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgccag
cactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggcagag
tcctactataggcatgcagctcagcttgtcccctccaatggtcagccttataatcagttg
gctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcagaagc
attgctgtgaagttccctttcccagctgcctccactaatctgcaaaaagcactttctaaa
gcactggaaagccgagatgaggtgaaaaccaagtggggtgtttctgacttcatcaaggcc
tttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccctctt
cgagaaaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactctcag
cagttagttcatgtcactgtcattaacctgtttcaacttcatcaccttcgtgactttagc
aatgaaactgagcagcacagttatagccaagatgagcagctatgttggacacagttactg
gccctctttatgtcttttcttggcatcctgtgcaagtgtcctctacagaatgagtctcag
gaggagtcctacaatgcctatcctcttccagcagtcaaggtctccatggactggctaaga
ctcagacccagggtctttcaggaggcagtggtggatgaaagacagtacatttggccctgg
ttgatttctcttctgaatagtttccatccccatgaagaggacctctcaagtactagtgcg
acaccacttccagaggagtttgaattacaaggattcttggcattgagaccttctttcagg
aacttggatttttccaaaggtcaccagggtattacaggagacaaagaaggccagcaacga
cgattacgacagcagcgcttgattgctataggcaaatggattgctgataatcagccaagg
ctaattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagaatta
atactggaagaccccagtgaagccaaagagaacctcattctgcaagaaacatctgtaata
gagtcgctggctgcagatgggagcccagggctaaaatcagtgctatctacaagccgaaat
ttgagcaacaactgtgacacaggagagaagccagtggttaccttcaaagaaaacattaag
ccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagggac
tatagcaaaggaataactgtaactaagaatgatggaaagaaggacaacaacaagaggaaa
actgaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtggca
gtgcaggtaaaatcccagacagaactaagaaagactccagtgtctgaagccagaaaaaca
cctgtaactcaaaccgcaactcaagcaagtaactcccagttcatccccattcatcaccct
ggagccttccctcctcttcccagcaggccagggtttccaccaccaacatatgttatcccc
cctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtccca
ggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctgggaaa
cagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccaggga
cctcaacaatcacagccaccttcccagcaaccccttacatctttaccagctcagccaaca
gcacagtctacaagccagttgcaggttcaagctctaactcagcaacaacagtcccctaca
aaagctgtacccgctttggggaaaagcccgcctcaccactctggattccagcagtatcaa
caggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattagggaaa
attatgcctgtgaaacagccctactaccttcagacccaagaccccataaaactgtttgag
ccgtcattgcaacctcctgtaatgcagcaacagcctctagaaaaaaaaatgaagcctttt
cccatggagccatataaccataatccctcagaagtcaaggtcccagaattctactgggat
tcttcctacagcatggctgataacagatctgtaatggcacagcaagcaaatatagaccgc
aggggcaaacggtcaccaggagtcttccgtccagagcaggatcctgtacccaggatgcca
tttgaggaccccaagagctcccctctgcttcctccggacctgttaaagagtctggctgcc
ttggaggaagaggaagagctgattttttctaaccctcctgatctttacccggctctgctg
gggcctctcgcctctcttcctggacgaagcctttttaaatccttattggagaagccctca
gagctcatgtcacattcatcctctttcctgtccctcaccggattctctctcaatcaggaa
agatacccaaataatagtatgttcaatgaggtatatgggaaaaacctgacatccagctcc
aaagcagaactcaatccctcaatggccccccaggaaacatctctgtattccctttttgaa
gggactccgtggtctccatcacttcctgccagttcagatcattcaacaccagccagccag
tctcctcattcctctaacccaagcagcctgcccagttctcctccaacacacaaccataat
tctgttccattctccaattttggacccattgggactccagataacagggatagaaggact
gcagatcggtggaaaactgataagccagccatgggtgggtttggcattgattatctctca
gcgacatcatcctctgagagcagttggcatcaggccagcactccgagtggctcctggaca
ggccatggcccctccatggaggattcctctgctgtcctcatggaaagcctaaagtctatc
tggtccagttccatgatgcatcctggaccttccgctctggagcagctgttaatgcagcag
aagcagaaacagcaacggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
