Chlorocebus sabaeus (green monkey): 103232468
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Entry
103232468 CDS
T04361
Symbol
COL4A5
Name
(RefSeq) collagen type IV alpha 5 chain
KO
K06237
collagen type IV alpha
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04151
PI3K-Akt signaling pathway
csab04382
Cornified envelope formation
csab04510
Focal adhesion
csab04512
ECM-receptor interaction
csab04518
Integrin signaling
csab04820
Cytoskeleton in muscle cells
csab04926
Relaxin signaling pathway
csab04933
AGE-RAGE signaling pathway in diabetic complications
csab04974
Protein digestion and absorption
csab05146
Amoebiasis
csab05165
Human papillomavirus infection
csab05200
Pathways in cancer
csab05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103232468 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103232468 (COL4A5)
04518 Integrin signaling
103232468 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103232468 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103232468 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103232468 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
103232468 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
103232468 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103232468 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
103232468 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103232468 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
103232468 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103232468 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csab04147
]
103232468 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
csab00536
]
103232468 (COL4A5)
Exosome [BR:
csab04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103232468 (COL4A5)
Glycosaminoglycan binding proteins [BR:
csab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103232468 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103232468
NCBI-ProteinID:
XP_007990718
LinkDB
All DBs
Position
X:96307927..96570592
Genome browser
AA seq
1691 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
VQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPPGPPGLVIPRPGTGITIGEKGN
IGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVVGPPGPPGFPGERGQKGDEGPPGISIPG
PPGLDGQPGAPGLPGPPGPPGPHIPPSDEICEAGPPGPPGSPGDKGLQGEQGMKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGSKGLPGIPGAPGAPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGSPGQDGLPGLPGPKGEPGGITFKG
ERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGPPGRTGVDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGSIGPPGSPGLPGKAGASGFPGTKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGPPGPMDPNLL
GSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLI
GPPGLKGTIGDMGFPGPQGVEGPPGPPGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPG
PKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPG
NPGLPGETGPVGGGGRPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPSGIPGSAGPEGEPGLTGPPGPPGLPGPSGQSIIIKGD
AGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT
RGLDGPPGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTLQIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPVSMQPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgc
agtggcataaaaggggaaaagggagagagagggtttccaggtttggaaggacacccagga
ttacctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
attcctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggaccccctgggatcccaggtatgaagggtgaaccaggtagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
gtacaaggcctacctggtcccactggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaagggtgagcaaggtcttcagggcccacctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagaccag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtccc
ccaggtggtgagaaaggtgagaagggtgagcaaggagagccaggcaaaagaggtaaacca
ggcaaagatggagaaaacggccaaccaggaattcctggtttgcctggtgatcctggttac
cctggtgaacccggaagggatggtgaaaagggccaaaaaggtgacattggcccacctgga
cctcctggacttgtaattcctagacctgggactggtataactataggagaaaaaggaaac
attgggttgcctggcttgcccggagaaaaaggagagcgaggatttcctggaatacagggc
ccacctggccttcctggacctccaggggctgcagttgtgggtcctcctggccctcctgga
tttcctggagaaaggggtcagaaaggtgatgaaggaccacctggaatttccattcctgga
cctcctggacttgatggacagcctggggctcctgggcttccggggcctcctggccctcct
ggacctcacatccctcctagtgatgagatatgtgaagcaggccctccaggccccccagga
tctccaggtgataaaggactccaaggagaacaaggaatgaaaggtgacaaaggtgacact
tgcttcaactgcattggaactggtatttcagggcctccaggtcaacctggtttgccaggt
ctcccaggtcctccaggatcccttggtttccctggacagaaaggtgaaaaaggacaagct
ggtgcaactggttccaaaggattaccaggcattccaggagctccaggtgctccaggcttt
cctggatctaaaggtgaacctggtgatatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttcccctggagctccagggcttcctggtttacctggctctcctggacag
gatggattgccagggcttcctggcccgaaaggagagcctggtggaattacttttaagggt
gaaagaggtccccctgggaacccaggtttaccaggcctcccagggaatatagggcctatg
ggtcctcctggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggggatccaggtcagactataacc
cagccagggaagcctggcttgcctggtaacccaggcagagatggtgaagtaggtcttcca
ggtgaccctggactcccagggcaaccaggcttgccagggatacctggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggctttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggccctcctggg
ccacctggctttccaggaccaaagggtgaaccaggatttgcattacctgggccacctggg
ccaccaggacttccaggtttcaaaggaacgcttggtccaaaaggtgatcgtggtttccca
ggacctccaggtcctccaggacgcactggtgtagatgggctccctggaccaaaaggtgat
gttggaccaaatggacaacctggaccaatgggacctcctgggctgccaggaataggtgtt
cagggaccaccaggaccaccagggattcctgggccaataggtcaacctggtttacatgga
ataccaggagagaagggggatccaggacctcctggacttgatgttccaggacccccaggt
gaaagaggcagtccagggatccctggagcacctggttctataggacctccaggatcacca
gggcttccaggaaaagcaggtgcctctggatttccaggtaccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgtacctggt
cttaaaggtgatgatggcttgcagggtcagccaggacttcctggccctgcaggagaaaaa
ggtagtaaaggagagcctggccttccaggccctcctggaccaatggatccaaatcttctg
ggctcaaaaggagagaagggggaacctggcttaccaggtatacctggagtttcagggcca
aaaggttatcagggcttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccaccaggtcccaaaggtaaccctggtctccctggacagccaggtcttata
ggacctcctggacttaaaggaaccatcggcgatatgggttttccagggcctcagggtgtg
gaagggcctcctggacctcctggagttcctggacagcctggctccccaggattacctgga
cagaaaggagacaaaggtgatcctggtatttcaagcattggtcttccaggtcttcctggt
ccaaagggtgagcctggtctgcctggatacccagggaaccctggtatcaaaggttctgtg
ggagatcctggtttgcctggattaccaggaacccctggagcaaaaggacaaccaggcctt
cctggattcccaggaaccccaggccctcctggaccaaaaggtattagtggccctcctggg
aaccctggccttccaggagaaactggtcctgtaggtggtggaggtcgtcctgggcaacca
gggcctccaggcgaaaaaggcaaacccggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaaacccaggaccccctggacttccaggactt
tctggccaaaagggtgatggaggattacctggaattccaggaaatcctggccttccaggt
ccaaagggcgaaccaggctttcatggtttccctggtgtgcagggtcccccaggccctcct
ggttctccgggtccagctctggaaggacctaaaggcaaccccgggccccaaggtcctcct
gggagaccaggtcctacaggttttcaaggtctaccaggtccagaaggtcccccaggtctc
cctggaaatggaggtattaaaggagagaagggaaacccaggccaacctgggctacctggc
ttgcctggtttgaaaggagatcaaggaccaccaggactccagggtaatcctggtcggccg
ggtctcaatggaatgaaaggagatcctggtctccctggtgttccaggattcccaggcatg
aaaggacccagtggaatacctggatcagctggtcctgagggggaaccgggacttactggt
cctccaggtcctcctggattacctggtccctcaggacagagtatcataatcaaaggagat
gctggtcctccaggaatccctggacaacctgggttaaaaggtctaccaggaccccaagga
cctcagggtttaccaggtccaactggccctccaggagatcctggacgcaatggactccct
ggctttgatggtgcaggagggcgcaaaggagacccaggtctgccaggacagccaggcacc
cgtggtttggatggtccccccgggccagatggattgcaaggtcccccaggtccccctgga
acctcctctattgcacatggatttcttattacacgccacagccagacaacggatgcacca
caatgcccgcagggaacacttcagatctatgaaggcttttctctcctgtatgtacaagga
aataaaagagcccatggccaagacttggggacggctggcagctgccttcgtcgctttagt
accatgccttttatgttctgcaacatcaataatgtttgcaacttcgcttcaagaaatgac
tattcttactggctctctaccccagagcccatgccagtgagcatgcaacccctaaagggc
cagagcatccagccattcattagtcgatgtgcagtatgtgaagctccagctgtggtgatc
gcagttcacagtcagacgatccagattccccgttgtcctcagggatgggattctctgtgg
attggttattccttcatgatgcatacaagtgcaggggcagaaggctcaggtcaagcccta
gcctctcctggttcctgcttggaagagtttcgttcagctcccttcatcgaatgtcatggg
aggggtacctgtaactactatgccaactcctacagcttttggctggcaactgtagatgtg
tcagacatgttcagtaaacctcagtcagaaacactgaaagcaggagacttgaggacacga
attagccgatgtcaagtgtgcatgaagaggacataa
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integrated database retrieval system