Chlorocebus sabaeus (green monkey): 103233090
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Entry
103233090 CDS
T04361
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103233090 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103233090 (CNOT1)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103233090 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103233090 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
103233090
NCBI-ProteinID:
XP_007991724
Ensembl:
ENSCSAG00000004731
LinkDB
All DBs
Position
5:complement(44460025..44567843)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECALLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMTSL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATNTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaattaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgattcaggagtgtgcgttg
ctgattacaaagccaaattttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaaacctgcaccccacttatttgcccagctgagtaaagtgctcaaa
ttaagcaaagtacaagaggtaatttttggccttgccctgttgaattcttctagctcagat
cttagaggtttcgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcctttggagttggacaa
gaacagatagacgcttttcttaagacgctgcgcagagattttccccaagaacgctgtccc
gtggtgctcgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattccggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggcattccattacagagtatttctgctccaggcagtgggatc
tggagtgatgggaaagataaaagtgatggagcacaggcacacacgtggaatgtagaagtc
ttgattgatgttcttaaagaactgaatccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtttgggtatggaagtgttcccagtagacctcatatatagaccttggaaa
catgctgaaggccagctctccttcattcaacattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctgaggctt
gcagaggttgggcagtatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaattaacacctcttggcataccttgcgccat
gaacttatctccactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaattcgccaacttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgatcaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgataagtgg
ctcacagataaaattcgagagcatggggagccttttatccaggcgtgtatgactttttta
aagagacgatgtccttctattttgggtggacttgccccagaaaaagaccaacccaaaagt
gctcaacttcctccagaaactctggcgacaatgttggcctgtctgcaagcttgtgcgggg
agtgtttctcaggagctatcggaaactatcctcaccatggtagccaattgcagtaatgtt
atgaataaggccagacaaccaccacctggagttatgccaaaaggccgtcctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatgacatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaaccccc
aatcaaaccactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggtgctcttggactccctgcagtgaat
aacgacccttttgtacagaggaaattgggcacctctggactgaatcagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaaccagcacttt
agtaaagagatagatgatgaagcaaacagctattttcagcgaatatataatcatccacca
catccaaccatgtctgttgatgaggtattagaaatgttgcagagatttaaagactctact
ataaagagggaacgagaagtgtttaactgtatgctaaggaacttgtttgaagagtatcgt
ttttttccccagtatcctgataaagagttacatataacagcctgcctgtttggtggtata
attgagaaaggactggtcacttacatggcactaggtctggctctacgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcgggattgctgcactagataga
tttaaaaacagattgaaggactatccccagtattgtcagcatttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatattgagtatggacagcagtctagagat
cctcctgtgaaaatgcaaggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttccagcaaaagctcctcttgctggtcaagttagcactatggtt
accacctcaacaaccaccactgttgctaaaacggttacagtcaccaggccaactggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacgttgcttgta
gccacagatcaaactgagagaattgtggagcccccggaaaatatccaggagaaaattgct
tttattttcaataatctctcacagtcaaatatgacacaaaaggttgaagagctgaaggaa
accgtgaaagaagaatttatgccttgggtttcacagtatctggttatgaagagagtcagt
attgagccaaactttcatagcctgtattcaaacttccttgacacgttgaagaatcctgaa
tttaacaagatggttctgaatgagacctacagaaacattaaagtgctcctgacctcagat
aaagctgcggccaatttctcagatcgttctttgctgaagaacttgggacactggctagga
atgatcacattagctaaaaacaaacccatcttacacactgacttggatgtgaaatcattg
ctgctagaggcttatgttaaaggacaacaagaattgctctacgtagtgccctttgttgcc
aaagtcttagaatctagcattcgtagtgtggtttttaggccaccaaacccttggacaatg
gcaattatgaatgtattagctgagctacatcaggaacatgatttaaagttaaacttgaag
tttgaaattgaggttctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctgaagaatttagatgagcaactctctgctccaaag
aaagatgtcaagcagccagaagaactccctcccatcacaaccacaacaacttctactaca
ccagctaccaacaccacttgtacagccacagttccaccacagccacagtacagctaccat
gacatcaatgtctattcccttgcgggcctggcaccacacattactctaaatccaacaatt
cccttgtttcaggcccatccgcagttgaagcagtgtgtgcgtcaggcaattgaacgggct
gtccaggagctggtccatcctgtggttgatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaggattttgctctggattcggaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggcaatgattacatgcagggaacct
ttgctcatgagcatatctaccaacctaaaaaacagttttgcctcagcccttcgtactgct
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gagttggcttgctgttttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaaggacgcagatac
tgtgatcctgttgttttaacatatcaagccgaacggatgccagagcaaatcaggctgaaa
gttggtggtgtggatccaaagcagttggctgtttatgaagagtttgcacgcaatgttcct
ggcttcttgcctacaaatgacttaagtcagcccacaggatttttagcccagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgtattacagaactggaa
cagcatctacatgccatcccaccaactttggccatgaaccctcaagctcaggctcttcga
agtctcttggaggttgtagttttatctcgaaactctcgggatgccatagctgctcttgga
ttgctccaaaaggctgtagaaggcttactagatgccaccagtggtgctgatgctgacctg
ctgctgcgctacagggaatgccacctcttggtactaaaagctctgcaggatggccgggca
tatgggtctccatggtgcaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggctgtggagctgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagcgcagtcaatggagaatggcttaaactacatggctgtggca
ttcgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgctcatgttact
gaggcagatctgttccacaccattgaaaccctcatgaggattaacgctcattccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcacggaggcccaaactttatgatgcattctgggatctctcaagcctca
gagtatgatgaccctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgcgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatactgaagactgatgat
ctcataacaaggttctttcgtctgtgtactgaaatgtgtgttgaaatcagttaccgtgct
caggctgagcagcagcacaatcctgctgctaatcccaccatgatccgagccaagtgctat
cacaacctggatgcctttgttcgactcattgcactgctcgtgaaacactcaggggaggcc
accaacactgtcacaaagattaatctgctgaacaaggtccttggtatagtagtgggagtt
ctccttcaggatcatgatgttcgtcagagtgaatttcagcagcttccctaccatcgaatt
tttatcatgcttctcttggaactcaatgcacctgagcatgtgttggaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagctcctggc
tttgtatatgcctggcttgaactgatttctcatcggatatttattgcaagaatgctggca
catacgccacagcagaaggggtggcctatgtatgcacagctactgattgatttattcaaa
tatttagcgcctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgctggttcttttgcatgatttcccagagttcctttgtgattac
cattatgggttctgtgatgtgatcccacctaattgtatccagttaagaaatttgatcctg
agtgcctttccaagaaacatgaggctccccgacccattcactcctaatctaaaggtggac
atgttgagtgaaattaacattgctccccggattctcaccaatttcaccggagtaatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcgatcaccagtcacttttctg
tctgatctgcgcagcaacctacaggtatccaatgaacctgggaatcgctacaacctccag
ctcatcaatgcactggtgctctatgtcgggactcaggccattgcacacatccacaacaag
ggcagcacgccttcaatgagcaccatcactcactcagcacacatggatatcttccagaat
ttggctgtggacttggacactgagggtcgctatctctttttgaatgcaattgcaaatcag
ctccggtacccaaatagccacacacactacttcagttgcaccatgctgtacctttttgca
gaggccaatacggaagccatccaagaacagatcacaagagttctcttggaacggttgatt
gtaaataggccacatccttggggtcttcttattaccttcattgagctgattaaaaaccca
gcgtttaagttctggaaccatgaatttgtacactgtgccccagaaatcgaaaagttattc
cagtcggttgcacagtgctgcatgggacagaagcaggcccagcaagtaatggaagggaca
ggtgccagttag
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integrated database retrieval system
