Chlorocebus sabaeus (green monkey): 103233182
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Entry
103233182 CDS
T04361
Symbol
PKD1L3
Name
(RefSeq) polycystin 1 like 3, transient receptor potential channel interacting
KO
K04989
polycystin 1L3
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
103233182 (PKD1L3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csab04040
]
103233182 (PKD1L3)
04091 Lectins [BR:
csab04091
]
103233182 (PKD1L3)
Ion channels [BR:
csab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103233182 (PKD1L3)
Lectins [BR:
csab04091
]
C-Type lectins
Others
103233182 (PKD1L3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Lectin_C
Knl1_RWD_C
Motif
Other DBs
NCBI-GeneID:
103233182
NCBI-ProteinID:
XP_007991951
Ensembl:
ENSCSAG00000004256
LinkDB
All DBs
Position
5:complement(55063602..55155171)
Genome browser
AA seq
1788 aa
AA seq
DB search
MFFKGGSWLWLYIRTSIILGSELNSPGPHGQNNCYQFNRFHCSFEEAEHYCHGQRGFLAH
IWNQEVQDLIQDFLEEGKKWWIGQNVMPLRKHQDENYPADVAAPGAPKPPSCTYLSRNLS
RILSKEDNCFLRHYFICQTDGVLDRDAHYERNENNSRLCQRTEKIKRGVAIARDKMPPGP
GPLSTTCHHPLPAHLSKTLCHPISPFPSVLQNTTSQITATSEASSQPLPVITQLTTPVSV
TRAGQSLAETTSSPKKAAHLNTVTSHLQVSLQNASGQVIDEIAGNFSRAVHGLQAHNKLQ
EACEFLQKLTALTPRFFKPAQVNLINSLIYLSEELLRIPFLNNSGLDFKVPATVCPFHSF
NDVTKAGEGSWLESKRDTEQVEDILEMSLAELGNIGEAFLEQDQSPESSVTLTSSVATLL
LSRQNTSTLPLSSYTLGHPAPVRLGFPSALALKELLNQHPGVNVQITGLAFNPFKDLDHR
NVVGSIGSVLLSANRKLLQVHDLVEDIEIMLWRNVSMETHPTSFNMSTDQLTITVNVTSL
EKSLIVSIDPDSLLLMTLYLGFQYQPNYTHFHLNITLPKDKVWQKDEEYTWVLTPEHLQY
GIGTYCIRAVLSESQKGAQQTPSLVSVITAVTQCYYWESHNQTWSSNGCQVGPQSTILRT
QCLCNHLTFFASDFFVVPRTVNVEDTVELFLRVTNNPVGVSLLAGLLGFYVITVVWAWKK
DQADMQKVKVTVLADNDPSAQFHYLIQVYTGYRRRAATTAKVVVTLYGSEGRSEPHHLCD
PQKTVFERGGLDVFLLTTRSSLGDLHSLRLWHDNSGISPSWYVSQVIVCDMAVKRKWHFL
CNCWLAVDLGDCELDRVFIPVSKRQLFSFRHLFSSMIVEKFTQDYLWLSVATRHPWNQFT
RVQRLSCCMTLLLCNMVINVMFWKINSTTAKRDKQLGPFGVAWSELLISIHTAVILFPIN
LVIGRLFPLIEPQETLPLFPPVQASCLSDASVEPVSAAIVVEELKETVRFLLRRDTYLLS
KCEQPPWSSCDVTKLVKLLSSLISSHLEGQSCHQQAERHWARVVPENHHHFCCYLRRVLQ
RLKSHLGTLGLTQGHQPCDFLDAARQLQKLQELLEIHILPTEQEPSREVTSFAILSSEEG
KKPISNGLSKWLTAVCWLLLGLTSLASAFFTALYSLELSKDQATSWMISIILSVLQNVFI
SQPGKVVFFTFLYSLMMSRMPQLNKEKEQQTKRILALLAKCSSSVPGSRDKNNPIYVAPA
MNSPTKRPERTLKKKKLFKLTGDILVQILFLTLLMTAICSVKNSNRFYLHQAIQKTFSPR
FSEIKLLQDFYPWANHILLPSLYGEYRGFIADGNSFLLGNVLLRQIRIADPGLFPAGVSP
REQVKPPHQHQEDTENYGVNWGPLDTNITKSDSIWHYQNQETLGGSPIQGEFATYSGGGY
AVKLGRNSSTAARVLQHLEQRHWLDQRTKGLFVEFVVFNANVNLFCVVILMLESSDVGAF
FTSVRLESFTSLQMSKKGFAWSIISQVIYYLLVCYHAFIQGCRLKRQKWRFFTERRNILD
TSIILISFIILGLDMKSISLLRKDMARYRDDRDRFISFHEAVKVNSAATHLVGFLVLLAT
VQLWNLLRHSPRLRVISRTLSRAWDEVVGFLLIILILLTGYAVAFNLLFGCSISDYRTFF
SSAVTVVGLLIGISHQEEVINLDPVLGTFLILTSVILMVLVVINLFVSAILMAFGKERKS
LKKEVALIDMLLQKLSNLLGISRPQKTSSEQAATTAMGTDTEVLDELP
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaaaggaggaagctggctttggttatacatcagaacaagtatcattctagga
agtgaactaaacagcccagggccacatgggcaaaataattgttaccagtttaacagattt
cactgcagctttgaggaagcagagcattactgtcatgggcagagaggattcctagctcat
atttggaaccaggaagttcaagatctcatccaggactttctggaagaaggaaagaagtgg
tggattgggcaaaatgtaatgccactgagaaagcatcaagatgaaaactacccagcagat
gttgcagcccccggagccccaaagccccccagctgcacctacctgtccagaaacctcagt
cggatcttatccaaagaggacaattgcttcctgagacactatttcatttgccagactgat
ggcgttttggacagagatgcccattatgaaagaaatgaaaataattctcgtttgtgccag
agaaccgagaagataaaaagaggagttgcaatagcaagagacaaaatgcccccagggcct
ggtcctctttcaaccacatgtcaccatcctcttcctgctcatctctccaagactctgtgt
catcccatcagcccgtttccttcagtactacaaaataccacatcacagataacagccaca
tctgaagccagcagccagcctctccctgtgataacacagctcaccacgcctgtgtctgtc
acacgtgctgggcaatctctggcagaaacaacttcaagcccaaagaaagcagctcatctg
aataccgtcacctctcatctgcaagtgtcattgcagaatgcatctggtcaggtcatagat
gagatagcaggaaacttcagcagagcagttcatggtttgcaagctcataacaaactacag
gaagcttgtgagttcctccagaaactaacagccttaaccccaagattttttaagccagct
caggttaatctcatcaattcccttatttacctgagtgaggagttactcaggatcccattt
ctgaacaacagcggtctggacttcaaagttcctgcaactgtctgcccctttcattccttc
aacgatgtcaccaaagctggagaaggaagttggctggaatccaagcgtgatactgagcag
gtagaagacatcctggaaatgtccttggcggagctcgggaatatcggggaagcatttctg
gagcaggaccagtcccccgagtcttcagtgactttgacctcctccgttgctactctgctg
ctgagcagacaaaacacatccaccttaccactgagctcttacactctgggtcacccagcc
cctgtgagactgggctttccgtcggctttggctttgaaggagctcttgaatcaacaccca
ggagttaatgtccaaataacaggactagctttcaatcccttcaaggatttggaccacaga
aacgttgttggaagcataggaagtgtgttactaagcgctaatcgcaaattgctccaagtc
catgatttagtggaggacattgagatcatgctctggagaaacgttagcatggaaacccat
cccaccagcttcaacatgagcacagatcagcttacaatcacagtgaacgtcacctccttg
gagaaatccctgatagtgagcatagatcctgacagtctccttttaatgacgctgtacctg
gggttccagtatcagcctaactacactcacttccacctaaacatcacccttccgaaggat
aaggtgtggcaaaaagatgaggagtacacgtgggtgctgactcctgagcatctacagtac
gggattggcacctactgtataagagctgtgctgagtgagagccagaagggtgctcagcag
acgcccagcttggtctcggtcatcaccgccgtcactcagtgttactactgggagagccac
aaccagacatggagcagcaatggatgccaagttgggccacagagcacaattctgaggaca
cagtgtctctgtaaccacctgaccttctttgccagcgacttctttgtcgtgcccaggacc
gtgaatgttgaagacacggttgaactgtttcttcgcgtgaccaacaatcctgttggggtg
tcactgctggctggccttttaggattctatgtgatcacagttgtgtgggcttggaaaaag
gatcaagcagatatgcagaaggtgaaggttactgtcctggctgataatgaccccagcgct
caatttcactaccttattcaggtctacaccggatatcgaagaagggctgctacaacagct
aaggttgtcgtcaccctctatggatcagagggacggagtgagccccatcacctctgtgac
ccccagaagacagtctttgaacgagggggcctggatgtcttccttctcaccactcggtcc
tctctaggggacctgcacagccttcggctctggcatgacaattctggcatcagtccctcc
tggtatgtcagccaggtaattgtctgtgacatggcagtgaagaggaagtggcatttcctg
tgcaattgctggctggctgtggacctcggagactgtgagcttgaccgcgtcttcatccca
gtttcaaagagacagctcttttcctttagacatctgttttcctccatgattgtcgaaaag
ttcacccaggattatctgtggctttcagttgcaactcggcatccctggaaccagtttaca
agggtccaacggctgtcttgctgcatgacactgctactctgcaacatggtcattaatgtt
atgttctggaagataaacagcaccactgccaagagagataagcaattgggtccatttggt
gtggcctggtctgagctgctgatcagcatccacactgctgtcatcctcttccccatcaat
cttgtcattgggcggctcttcccgttgattgagccacaggagactctgcccctctttcct
cccgtccaggcctcctgcctctcagatgcttctgttgagcctgtctctgccgcaatcgta
gttgaggaattaaaggaaactgtgagattcctgctcaggagagatacatacctactctcc
aagtgtgagcagccgccatggagttcttgtgacgttactaagctggtgaaacttttatcc
agcctcatatcgtctcacctggagggtcaaagctgtcatcagcaggcagagcgccactgg
gcacgtgttgttcctgaaaaccaccatcatttctgctgttacctgcgtagagttctgcag
aggctgaaatctcacttaggcacgctgggtctcacccagggtcaccagccctgtgacttc
ctagatgcagccagacaacttcaaaaactccaggaactcttggaaatacatattcttccc
acggagcaagagccatccagggaagtcaccagtttcgccatcctgagctcagaagaaggg
aaaaagcccatctctaatggcctgtccaaatggttaactgcagtctgctggctcctccta
ggtctgactagcctggcttcagccttttttacagcactttatagcttggaattgagcaaa
gaccaagccaccagctggatgatttcaattattttatcagtgcttcaaaacgtcttcatc
agccagccaggaaaggtggtcttcttcacattcttatactcactgatgatgagcaggatg
ccacagcttaacaaagagaaggaacaacaaacaaagaggatcttggcactcttggcaaaa
tgttcttcgtcagtaccaggttcaagagataagaacaaccccatctatgtagccccagct
atgaatagtccaactaagcgtccagaaagaaccttgaaaaagaagaaactcttcaagctg
actggagatattttggtacaaatccttttccttaccctgttgatgactgcaatctgctct
gtaaagaactccaatagattttacctccaccaagctatccagaagaccttttcgccccga
ttctcggaaatcaaacttcttcaggatttctatccctgggccaatcacatcctccttcct
agcctgtatggggagtacagaggatttattgctgatgggaactcctttcttttgggcaat
gttctgctgcgtcagattcgcattgctgatcccggactcttcccagctggagtatctccc
cgggagcaagtgaagccacctcaccaacatcaggaggatacagagaactatggggttaat
tggggcccccttgatacaaacatcaccaaatcagatagcatttggcattatcagaatcag
gagaccctgggtggttctcccattcaaggggaatttgccacttactcaggaggaggatac
gctgtgaaacttggaagaaactccagtactgcagcccgagttctacagcatcttgaacag
aggcattggctagaccaacgcacaaaaggcctctttgtggagtttgtggtcttcaatgct
aatgtgaacctattctgtgttgtgatcctgatgttggagtccagtgatgtgggtgctttc
ttcacctctgtgagactggaaagcttcacttcccttcagatgtcaaagaagggctttgcc
tggtctatcatctcacaagtcatctattatctactggtctgttaccatgccttcatacag
ggttgtcggctgaaacggcagaagtggaggttcttcactgagagaagaaacattctggac
acaagtataatcctcattagcttcatcatcctggggcttgacatgaagagtatttctcta
cttaggaaagacatggcacgataccgcgatgaccgggacaggtttatcagcttccacgag
gcagtaaaagtgaactctgctgcgactcaccttgtgggcttcctggttctgctggcaacc
gttcagttatggaacctgctgcgtcatagccccaggctgcgggtcatcagcaggacactg
agccgagcctgggacgaggtggtgggctttctgctgatcatcctaatcctgctgacaggc
tatgccgttgcctttaacctgctgtttggatgcagcatctctgactaccggacatttttc
agctcagcagtgactgttgttggtctcctgatcggaatttctcaccaagaggaggttatc
aatttagacccagtcctgggcacctttctgatcctcaccagtgtcatcttgatggtactt
gtggtaattaatctttttgtttctgccattctcatggcctttggaaaagaaagaaagtcg
cttaagaaagaagtggcactaatagatatgctgctacagaagctctcaaatttgttagga
atcagtcggccccaaaaaacctcatctgagcaagcagccacgacagcaatgggcactgac
actgaagttttagatgaactaccttaa
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integrated database retrieval system
