KEGG   Chlorocebus sabaeus (green monkey): 103233257
Entry
103233257         CDS       T04361                                 
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103233257 (EDC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103233257 (EDC4)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103233257 (EDC4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     103233257 (EDC4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 WD40_WDHD1_1st Beta-prop_EDC4L Beta-prop_TEP1_2nd DUF445 WD40_CDC20-Fz WD40_Prp19 Beta-prop_HPS5 WDR55 EIF3I
Other DBs
NCBI-GeneID: 103233257
NCBI-ProteinID: XP_007992104
Ensembl: ENSCSAG00000003964
UniProt: A0A0D9QVD3
LinkDB
Position
5:complement(59553312..59565714)
AA seq 1401 aa
MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TNKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSATHGSQPDLRRIVELPAPANFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQ
LDGSLTMNSSGSLQASPRGLLPSLLPAPADKLTPKGPGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEASTPDSQVWPTAPDITRETCST
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVP
APRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEHQVPEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGS
MKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEV
QHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKAARRLSLMLHGLVTPSLP
NT seq 4206 nt   +upstreamnt  +downstreamnt
atggcctcctgcgcgagcatcgatatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccgacccgcgggcggccccagtgcagagagcccacggccatccagtgcctac
aatggggacctcaatgggcttctggtcccagacccgctctgctcaggtgatggtacctca
acaaacaagactggtcttcggaccatgccacccattaacctgcaagagaagcaggtcatc
tgtctctcaggagatgatagctccacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctatgccattcgggctgccaacaatggctccgccatggtgcgg
gtgatcagtgtcagcacttcggagcggaccttgctcaagggcttcacaggcagtgtggct
gatctggcttttgcacacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccat
atccggcagccagagggcacgccactgaaccactttcgcaggatcatctggtgccccttc
atcccggaggagagcgaggactgctgtgaggagagcagcccgacggtggccctgctgcat
gaagaccgggctgaggtgtgggacctggacatgctccgctccagccacagcacttggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagctctctcccctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaagatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccataagaaacaa
gaccctgatgtccctttctggaggttccttattactggtgctgaccagaaccgagagcta
aagatgtggtgtacggtgtcctggacctgcctgcagactgttcgcttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatac
ctgattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaaccag
gaggagggtcatgcctgcttcagctccatctcggagttcctgctcacccaccctgtgctg
agcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcctgcc
gaagaggaaaatgacagcctgggtgctgatggtacccatggagctggtgccatggagtct
gcagctggtgtgctcatcaaactcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgcttccagccacagttgaaccctgatgtggtggccccactccccacccacactgcc
catgaggactttacatttggagagtctcggcccgaactgggctccgagggcctggggtca
gccactcacggctcccagcctgacctccgacgaatcgtggagctgcctgcacctgccaac
ttcctcagtctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgaca
cctagcgcctccttgcagcagatcactgcctctcccagcagcagcagcagtggtagcagc
agcagcagcagcagcagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttgaccaggccacctgaggagctgactttgagccccaagctgcag
ctggatggcagcctgacaatgaacagcagtggcagcctgcaggcaagcccacgcggcctc
ctgcccagcctgctcccagccccagccgacaaactgactcccaaggggccgggccaggtg
cctactgctgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccc
caagcctcccctagccgcacccgttcccctgatgtcatctcctcagcttccactgccctg
tcccaggacatccctgagattgcatctgaggccctgtcccgtggttttggctcctctgca
ccagagggccttgagccagacagtatggcttcagccgcctcagcactgcacctactgtcc
ccacggccccggccagggcccgagctcggcccccagcttggccttgatggaggccctggg
gacggagatcggcatagtaccccctccctcctggaggcagccttgacccaggaggcctcg
actcctgacagtcaggtttggcccacagcacctgacattactcgtgagacctgcagcacc
ctggcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccga
ccaccatatcacctgctgcagcaacgtgacagtcaggatgccagtgctgagcaaagtgac
catgatgatgaggtagccagccttgcctctgcttcaggaggctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaag
ctcaaaaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagag
caccaggtgccagagccccctgaggactggccagcgctaatttggcaacagcagagagag
ctggcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtacccaactcgaa
ggcctgcagagcacagttacaggccacgtagaacgtgcccttgagacccggcacgagcag
gagcagcggcggctggagcgagcactggctgaggggcagcagcggggagggcagctgcag
gagcagctgacacaacagttgtcccaagcactgtcttcagctgtagctgggcgactagag
cgcagcatacgggatgagatcaagaagacagtccctccatgtgtctcaaggagtctggag
cctatggcaggccaactgagcaactcagtggctaccaagctcacagctgtggagggcagc
atgaaagagaacatctccaagctgctcaagtccaagaacttgactgatgccatcgcccga
gcagctgcagacacattacaggggccgatgcaggcagcctaccgggaagccttccagagt
gtggtgctgccggcctttgagaagagctgccaggccatgttccagcaaatcaatgatagc
ttccgactggggacacaggaatacttgcagcagctagaaagccacatgaagagccggaag
gcacgggaacaggaggccagggagcctgtgctggcccagctgcggggcctggtcagcaca
ctgcagagtgccactgagcagatggcagccaccgtggccagcagtgttcgggctgaggtg
cagcaccagctgcatgtggctgtgggcagccttcaggagtccattttagcacaggtacag
cgcatcgttaagggtgaggtgagtgtggcgctcaaggagcagcaggccgctgtcacctcc
agcatcatgcaggccatgcgctcagctgctggcacacccgtcccctctgcccaccttgac
tgccaggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggcc
ttccagcaggcactgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgta
gacccagcccaggtttttgggcagccaccctgcccactctctcagcctgtgctcctttcc
ctcatccagcagctggcatctgaccttggcactcgaactgacctcaagctcagctacctg
gaagaggccgtgatgcatctggaccacagtgaccccatcactcgggaccacatgggctcc
gttatggcccaggtgcgccaaaagctttttcagttcctgcaggctgagccacacaactca
cttggcaaagcggcccggcgtctcagcctcatgctgcatggtctcgtgacccccagcctc
ccttag

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