Chlorocebus sabaeus (green monkey): 103233257
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Entry
103233257 CDS
T04361
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103233257 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103233257 (EDC4)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103233257 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103233257 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
DUF445
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
103233257
NCBI-ProteinID:
XP_007992104
Ensembl:
ENSCSAG00000003964
UniProt:
A0A0D9QVD3
LinkDB
All DBs
Position
5:complement(59553312..59565714)
Genome browser
AA seq
1401 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TNKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSATHGSQPDLRRIVELPAPANFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQ
LDGSLTMNSSGSLQASPRGLLPSLLPAPADKLTPKGPGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEASTPDSQVWPTAPDITRETCST
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVP
APRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEHQVPEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGS
MKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEV
QHQLHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKAARRLSLMLHGLVTPSLP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgatatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccgacccgcgggcggccccagtgcagagagcccacggccatccagtgcctac
aatggggacctcaatgggcttctggtcccagacccgctctgctcaggtgatggtacctca
acaaacaagactggtcttcggaccatgccacccattaacctgcaagagaagcaggtcatc
tgtctctcaggagatgatagctccacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctatgccattcgggctgccaacaatggctccgccatggtgcgg
gtgatcagtgtcagcacttcggagcggaccttgctcaagggcttcacaggcagtgtggct
gatctggcttttgcacacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccat
atccggcagccagagggcacgccactgaaccactttcgcaggatcatctggtgccccttc
atcccggaggagagcgaggactgctgtgaggagagcagcccgacggtggccctgctgcat
gaagaccgggctgaggtgtgggacctggacatgctccgctccagccacagcacttggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagctctctcccctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaagatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccataagaaacaa
gaccctgatgtccctttctggaggttccttattactggtgctgaccagaaccgagagcta
aagatgtggtgtacggtgtcctggacctgcctgcagactgttcgcttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatac
ctgattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaaccag
gaggagggtcatgcctgcttcagctccatctcggagttcctgctcacccaccctgtgctg
agcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcctgcc
gaagaggaaaatgacagcctgggtgctgatggtacccatggagctggtgccatggagtct
gcagctggtgtgctcatcaaactcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgcttccagccacagttgaaccctgatgtggtggccccactccccacccacactgcc
catgaggactttacatttggagagtctcggcccgaactgggctccgagggcctggggtca
gccactcacggctcccagcctgacctccgacgaatcgtggagctgcctgcacctgccaac
ttcctcagtctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgaca
cctagcgcctccttgcagcagatcactgcctctcccagcagcagcagcagtggtagcagc
agcagcagcagcagcagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttgaccaggccacctgaggagctgactttgagccccaagctgcag
ctggatggcagcctgacaatgaacagcagtggcagcctgcaggcaagcccacgcggcctc
ctgcccagcctgctcccagccccagccgacaaactgactcccaaggggccgggccaggtg
cctactgctgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccc
caagcctcccctagccgcacccgttcccctgatgtcatctcctcagcttccactgccctg
tcccaggacatccctgagattgcatctgaggccctgtcccgtggttttggctcctctgca
ccagagggccttgagccagacagtatggcttcagccgcctcagcactgcacctactgtcc
ccacggccccggccagggcccgagctcggcccccagcttggccttgatggaggccctggg
gacggagatcggcatagtaccccctccctcctggaggcagccttgacccaggaggcctcg
actcctgacagtcaggtttggcccacagcacctgacattactcgtgagacctgcagcacc
ctggcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccga
ccaccatatcacctgctgcagcaacgtgacagtcaggatgccagtgctgagcaaagtgac
catgatgatgaggtagccagccttgcctctgcttcaggaggctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaag
ctcaaaaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagag
caccaggtgccagagccccctgaggactggccagcgctaatttggcaacagcagagagag
ctggcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtacccaactcgaa
ggcctgcagagcacagttacaggccacgtagaacgtgcccttgagacccggcacgagcag
gagcagcggcggctggagcgagcactggctgaggggcagcagcggggagggcagctgcag
gagcagctgacacaacagttgtcccaagcactgtcttcagctgtagctgggcgactagag
cgcagcatacgggatgagatcaagaagacagtccctccatgtgtctcaaggagtctggag
cctatggcaggccaactgagcaactcagtggctaccaagctcacagctgtggagggcagc
atgaaagagaacatctccaagctgctcaagtccaagaacttgactgatgccatcgcccga
gcagctgcagacacattacaggggccgatgcaggcagcctaccgggaagccttccagagt
gtggtgctgccggcctttgagaagagctgccaggccatgttccagcaaatcaatgatagc
ttccgactggggacacaggaatacttgcagcagctagaaagccacatgaagagccggaag
gcacgggaacaggaggccagggagcctgtgctggcccagctgcggggcctggtcagcaca
ctgcagagtgccactgagcagatggcagccaccgtggccagcagtgttcgggctgaggtg
cagcaccagctgcatgtggctgtgggcagccttcaggagtccattttagcacaggtacag
cgcatcgttaagggtgaggtgagtgtggcgctcaaggagcagcaggccgctgtcacctcc
agcatcatgcaggccatgcgctcagctgctggcacacccgtcccctctgcccaccttgac
tgccaggcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggcc
ttccagcaggcactgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgta
gacccagcccaggtttttgggcagccaccctgcccactctctcagcctgtgctcctttcc
ctcatccagcagctggcatctgaccttggcactcgaactgacctcaagctcagctacctg
gaagaggccgtgatgcatctggaccacagtgaccccatcactcgggaccacatgggctcc
gttatggcccaggtgcgccaaaagctttttcagttcctgcaggctgagccacacaactca
cttggcaaagcggcccggcgtctcagcctcatgctgcatggtctcgtgacccccagcctc
ccttag
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integrated database retrieval system