Chlorocebus sabaeus (green monkey): 103233635
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Entry
103233635 CDS
T04361
Symbol
LSM7
Name
(RefSeq) LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03018
RNA degradation
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103233635 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
103233635 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103233635 (LSM7)
03041 Spliceosome [BR:
csab03041
]
103233635 (LSM7)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103233635 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
103233635 (LSM7)
Spliceosome [BR:
csab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103233635 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
103233635
NCBI-ProteinID:
XP_007992876
Ensembl:
ENSCSAG00000011599
UniProt:
A0A0D9RGQ8
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All DBs
Position
6:complement(2108212..2121547)
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AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDD
QYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaggagaagaagaaaaaggagagcatcttggacttgtccaagtacatcgac
aagacgatccgggtgaagttccagggaggacgcgaagccagtggaatcctgaagggcttc
gacccactcctcaaccttgtgctggacggcaccattgagtacatgcgagaccctgatgac
cagtacaagctcacggaggacacccggcaactaggcctcgtggtgtgccggggcacgtct
gtggtgctgatctgcccgcaggacggcatggaggccatccccaaccccttcatccagcag
caggacgcctag
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