Chlorocebus sabaeus (green monkey): 103233804
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Entry
103233804 CDS
T04361
Symbol
XAB2
Name
(RefSeq) XPA binding protein 2
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103233804 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103233804 (XAB2)
03041 Spliceosome [BR:
csab03041
]
103233804 (XAB2)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103233804 (XAB2)
Spliceosome [BR:
csab03041
]
Complex B
Other components
Prp19-related factors
103233804 (XAB2)
Complex C
103233804 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
103233804
NCBI-ProteinID:
XP_007993251
Ensembl:
ENSCSAG00000008362
UniProt:
A0A0D9R7M5
LinkDB
All DBs
Position
6:complement(7105353..7116063)
Genome browser
AA seq
855 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPSRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtctttgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagttcaaacagggcgccccgaagcccaggctcaatcagctatatgagcgggca
ctcaagctgctaccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccccgcctacgaagatgtcaacaactgtcatgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacacacccgccgcaccttcgaccgtgccctccgggcactg
cccatcacgcagcattctcgaatttggcccctgtatctgcgcttcctgcgctcccaccca
ctgcccgagacagctgtgcgaggctatcggcgcttcctcaagctgagtcccgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggccgcacagcgcctg
gccaccgtggtgaacgacgagcgtttcgtgtctaaggccggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtacagtccctcaatgtg
gacgccatcatccgtgggggcctcacccgcttcaccgaccagctgggcaagctctggtgt
tcgcttgccgactactacatccgcagcggccacttcgagaaggctcgggatgtgtatgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgtttgacagctatgcc
cagtttgaggagagcatgatcgccgcaaagatggagaccgcctcagagctggggcgcgag
gaggaggatgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccga
cgtcccctgctgctcaacagcgtcttgctgcgccaaaatccacaccacgtgcacgagtgg
cacaagcgtgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagag
gctgtgcagacggtggaccccttcaaggccacaggcaagccccacactctgtgggtggcg
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcggg
gagttggagctccgacacgagaactacgatgaggccttgcggctgctgcgaaaggccacg
gcgctgcctgcccgccgggctgagtactttgatggctcagagcccgtgcagaaccgcgtg
tacaagtcgctgaaggtctggtccatgctcgccgacctggaggagagcctcggcaccttc
cagtccaccaaagccgtgtatgaccgcatcctggacctgcgcatcgcgacaccccagatc
gtcatcaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaaattcattgcccgctatgggggccgcaagctggagcgggcacgggacctgttt
gaacaggctctggatggctgtcccccaaaatatgccaagaccttgtacctgctgtacgca
cagctggaggaggagtggggcctggctcggcatgccatggccgtgtacgagcgtgccacc
agggccgtggagcccgcccagcagtatgacatgttcaacatctacatcaagcgggcggcc
gagatctatggggtcacgcacacccgtggcatctaccagaaggccattgaggtgctgtcg
gacgagcacgcgcgtgagatgtgcctgcggtttgcagatatggagtgcaagctcggggag
atcgaccgcgcccgggccatctacagcttctgctcccagatctgtgacccccggacgacc
ggcgcattctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
aaggagatgctgcgtatccggcgcagcgtgcaggccacgtacaacacacaggtcaacttc
atggcctcacagatgctcaaggtctccggcagtgccacgggcaccgtgtctgacctggcc
cccgggcagagcggcatggacgacatgaagctgctggaacagcgggcagagcagctggcg
gctgaggcggagcgcgaccagccctcgcgtgcccagagcaagatcctgttcgtgaggagt
gacgcctcccgggaggagctggcggagctggcacagcaggtcaaccctgaggagatccag
ctgggcgaggacgaggacgaggacgagatggacctggagcccaacgaggttcggctggag
cagcagagcgtgccagccgccgtgttcggcagcctgaaggaagactga
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