Chlorocebus sabaeus (green monkey): 103233917
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Entry
103233917 CDS
T04361
Symbol
SMARCA4
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03082
ATP-dependent chromatin remodeling
csab04714
Thermogenesis
csab05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103233917 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103233917 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103233917 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103233917 (SMARCA4)
03036 Chromosome and associated proteins [BR:
csab03036
]
103233917 (SMARCA4)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103233917 (SMARCA4)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103233917 (SMARCA4)
Chromatin remodeling factors
BAF complex
103233917 (SMARCA4)
PBAF complex
103233917 (SMARCA4)
GBAF(ncBAF) complex
103233917 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
103233917
NCBI-ProteinID:
XP_007993454
LinkDB
All DBs
Position
6:9943162..10044476
Genome browser
AA seq
1679 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKAIEEGTLEEIEEEVRQKK
SSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDA
VIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKD
VMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSES
ESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggcggaactcctcggccgggtccttccccgggccct
ggcccttcccctggagccatgctgggccctagcccgggtccctcgccgggctccgcccac
agcatgatggggcccagcccggggccgccctcagcaggacaccctatccccacccagggg
cctggagggtaccctcaggacaacatgcaccagatgcacaagcccatggagtccatgcat
gagaagggcatgtcagacgacccgcgctacaaccagatgaaaggaatggggatgcggtca
gggggccacgctgggatggggcccccgcccagccccatggaccagcactcccaaggttac
ccctcgcccctgggtggctctgagcatgcctctagtccagttccagccagtggcccgtct
tcaggcccccagatgtcttccggaccaggaggggcaccgctggatggtgctgaccctcag
gccttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcctacaagatgctggccagggggcagcccctccccgaccacctg
cagatggcggtgcagggcaagcggccaatgcctgggatgcagcagcagatgccaacgcta
cctccaccctcggtgtccgcaacaggacccggacctggccctggccctggccctggcccc
ggtcccggcccggcacctccaaattacagcaggcctcatggtatgggagggcccaacatg
ccccccccaggaccctcaggcgtgccccctgggatgccgggccagcctcctggagggcct
cccaagccctggcctgaaggacccatggcgaatgctgctgcccccacaagcacccctcag
aaactgatccccccgcagccaacgggtcgcccttcccctgcaccccctgccgtcccacct
gccgcctcgcctgtgatgccaccccagacccagtcccccgggcagccggcccagcccgca
cccatggtgccgctgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctcgaccctgtggagatcctgcaggagcgcgagtacaggctgcaggctcgcattgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagca
accattgagctcaaggccctcaggctgctgaactttcagaggcagctgcgccaggaggtg
gtggtgtgcatgcggagggacacagcgctggagacagccctcaatgctaaggcctacaag
cgcagcaagcgccagtccctgcgcgaggcccgcatcaccgagaagctagagaagcagcag
aagattgagcaggagcgcaagcgacggcagaagcaccaggaatacctcaatagcattctc
cagcatgccaaggatttcaaggaatatcacagatcggtcacaggcaaaatccagaagcta
accaaggcagtggccacgtaccatgccaacacggagcgggagcagaagaaagagaacgag
cggatcgagaaggagcgcatgcggaggctcatggctgaagatgaggaggggtaccgcaag
ctcatcgaccagaagaaggacaagcgcctggcctacctcttgcaacagacagatgagtac
gtggctaacctcacagagctggtgcggcagcacaaggccgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacgcctgccatcggg
ccggatggtgagcctctggacgagaccagccagatgagcgacctcccggtgaaggtgatc
catgtggagagcgggaagatcctcacgggcacagatgcccccaaagccgggcagctggag
gcctggctcgagatgaacccggggtatgaagtagctccgaggtctgatagtgaagaaagt
ggctcagaagaagaggaagaggaggaggaggaagagcagccgcaggcagcgcagcctccc
accctgcccgtggaggagaaaaagaagattccagatccagacagcgacgacgtctctgag
gtggacgcacggcacatcattgagaacgccaagcaagatgtcgatgatgagtatggtgtg
tcccaggcccttgcacgtggcctgcagtcctactatgccgtggcccacgctgtcaccgag
agagtggacaagcagtcagcgcttatggtcaatggtgtcctcaaacagtaccagatcaaa
ggcttggagtggctggtgtccctgtacaacaacaacctgaacggcatcctggctgacgag
atgggcctggggaagaccatccagaccatcgcgctcatcacgtacctcatggagcacaaa
cgcatcaacgggcctttcctcatcattgtgcctctctcaacgctgtccaactgggcgtac
gagtttgacaagtgggccccctccgtggtgaaggtgtcctacaagggatccccagcagca
agacgggcctttgtcccccagctccggagtgggaagttcaacgtcttgctgacgacgtac
gagtacatcatcaaagacaagcacatcctcgccaagatccgttggaagtacatgattgtg
gacgaaggtcaccgcatgaagaaccaccactgcaagctgacgcaggtgctcaacacgcac
tacgtggcgccccgccgcctgctgctgacaggcacaccactgcagaacaagcttcccgag
ctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcaccttcgag
cagtggttcaacgcacccttcgccatgaccggggaaaaggtggacctgaatgaggaggaa
accattcttatcatccggcgtctccacaaagtgctgcggcccttcttgctccgacgactc
aagaaggaagtcgaggcccagttgcccgaaaaggtggagtatgtcatcaagtgcgacatg
tctgcgctgcagcgagtgctctaccgccacatgcaggccaagggcgtgctgctgactgat
ggctccgagaaggacaaaaagggcaaaggcggcaccaagaccctgatgaacaccatcatg
cagctgcggaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttcc
gagcacttggggttcaccggcggcattgtccaagggctggacctgtaccgagcctcgggt
aaattcgagcttcttgatagaattcttcccaaactccgagcaaccaaccacaaagtgctg
ctgttctgccaaatgacctccctcatgaccatcatggaagattactttgcatatcgtggc
tttaaatacctcaggcttgatggaaccacgaaggcagaggaccggggcatgctgctgaaa
accttcaacgagcccggctccgagtacttcatcttcctgcttagcacccgggccgggggg
ctcggcctgaacctccagtcggcggacactgtgatcattttcgacagcgactggaatcct
caccaggacctgcaagcgcaggaccgagcccaccgcattgggcagcagaacgaggtacgc
gtgctccgcctctgcacagtcaacagcgtggaggagaagatcctagccgcggccaagtac
aagctcaacgtggaccagaaggtgatccaggccggcatgttcgaccagaagtcctccagc
cacgagcggcgtgccttcttgcaggccatcctggagcacgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaggaagacgaggtgcctgacgatgag
accgtcaaccagatgatcgcccggcacgaggaggagtttgatctgtttatgcgcatggac
ctggaccgcaggcgcgaggaggcccgcaaccccaagcggaagccgcgcctcatggaggag
gatgagctcccttcgtggatcatcaaggatgatgcggaggtggagcgcctgacctgtgag
gaggaggaggagaagatgtttggccgcggctcccgccaccgcaaggaggtggactacagc
gactcactgacagagaagcagtggctcaagaaaattacaggaaaagatatccatgacaca
gccagcagtgtggcacgtgggctacaattccagcgtggccttcagttctgcacacgtgcg
tcaaaggccatcgaggagggtacgctggaggagatcgaagaggaggtccggcagaagaaa
tcgtcacggaagcgcaagcgagacagcgatgccggctcctccaccccgaccaccagcacc
cgcagccgcgacaaggacgacgagagcaagaagcagaagaagcgtgggcggccgcctgcc
gagaagctctccccgaacccacccaacctcaccaagaagatgaagaagattgtggacgcc
gtgatcaagtacaaggacagcagcagtggacgtcagctcagcgaggtcttcatccagctg
ccctcgcgaaaggagctgccggagtactacgagctcatccgcaagcctgtggacttcaag
aagataaaggagcgcatccgcaaccacaagtaccgcagcctcaatgacctagagaaggac
gtcatgctgctgtgccagaacgctcagaccttcaacctggagggctccctgatctatgaa
gattccatcgtcttgcagtcagtcttcaccagtgtgcggcagaaaatcgagaaggaggat
gacagtgaaggcgaggagagtgaggaggaggaagagggcgaggaggaaggctccgaatct
gaatctcggtctgtcaaagtgaagatcaagcttggccggaaggagaaagcacaggaccgg
ctgaagggcggccggcggcgaccgagccgagggtcccgagccaagccggtcgtaagtgat
gacgacagtgaggaggaacaagaggaggaccgctcaggaagtggcagcgaagaagactga
DBGET
integrated database retrieval system
