KEGG   Chlorocebus sabaeus (green monkey): 103234177
Entry
103234177         CDS       T04361                                 
Symbol
LSM4
Name
(RefSeq) LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03018  RNA degradation
csab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103234177 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103234177 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103234177 (LSM4)
   03041 Spliceosome [BR:csab03041]
    103234177 (LSM4)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103234177 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103234177 (LSM4)
Spliceosome [BR:csab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103234177 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 103234177
NCBI-ProteinID: XP_007993980
Ensembl: ENSCSAG00000005370
UniProt: A0A0D9QZ89
LinkDB
Position
6:complement(16783566..16800116)
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcactgttgaagacggctcagaatcaccccatgttggtggagttgaaa
aatggggagacgtacaacggacacctggtgagctgcgacaactggatgaacattaacctg
cgagaagtcatctgcacgtccagggacggggacaagttctggcggatgcctgagtgctac
atccgtggcagcaccatcaagtacctgcgcattcctgacgagatcattgacatggtcaag
gaggaggtggtggccaagggccgcggccgcggaggcctgcagcagcagaagcagcagaaa
ggccgcggcatgggcggcgccggccgaggtgtgtttggcggccggggccgaggtgggatc
ccgggcacaggcagaggccagccagagaagaagccgggcagacaggcgggcaaacagtga

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