Chlorocebus sabaeus (green monkey): 103234449
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Entry
103234449 CDS
T04361
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csab03036
]
103234449
Enzymes [BR:
csab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
103234449
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103234449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
CS
Helicase_C
IHO1
Motif
Other DBs
NCBI-GeneID:
103234449
NCBI-ProteinID:
XP_007994405
Ensembl:
ENSCSAG00000004794
LinkDB
All DBs
Position
6:27772397..27874056
Genome browser
AA seq
1475 aa
AA seq
DB search
MSESRYPKPGLQGPRPISPPGHRVALCRALLGGWVAHVVYDALRPARACAGIRSVREARG
QAGREPRARGCVTARTERVASGRPRGPQGLLGTRSVGHLPRGAEALNVEGRKALAAGAWR
GRTRPASPVTAGDFQGEGAHLPSGARRMLQLLVLKIEDPGCFWVIIKGCSPFLDHDVDYQ
KLNSAMNDFYNSMCQDIKIKPLTLEEGQVCVVYCEELKCWCRAIVKSIMSSADQYLAECF
LVDFAKNIPVKSKNIRVVVESFMQLPYRAKKFSLYCTKPVTLHIDFCRDSTDIVPAKKWD
SAAIQYFQNLLKATTQVEARLCAVEEDTFEVYLYVTIKDEKVCVNDDLVAKNYACYISPT
KNKNLQYLEKPRLNIKSAPSFNKLNPALTLWPMFLQGKDVQGIEDSRGLNFLAQSLQHTW
RRGIVGDLRPTATAPDKAVKCNMDSLRDSPKNKSEKKHHCISLKDTNKCVESSAYWPTKR
GITIYADPDVPEGSALSQKPNEKPLRLAEKKEYDEKNSCVKLLQFLNPDPLRADGISDLQ
QLQKLKGLQPPVAVLRNKIEPCLTIDSSPLSADLKKALQRNQFPGPSHTESYSWPPMARG
CDVVVISHCESSPLLYLLPVLTILQTGACYKSLPSRNGPLAVIVCPGWKKAQFIFELLGE
YSMSSRPLHPVLLTIGLHKEEAKNTKLPRDCDVIVTTPYSLLRLLSCQSLLFLRLCHLIL
DEVEVLFLEANEQMFAILDNFKKNIEVEERESAPHQIVAVGVHWNKHIEHLIKEFMNDPY
IVITAMEEAALYGNVQQVVHLCLESEKTSTLLQALDFIPSQAQKTLIFTCSVAETEIVCK
VVESNSIFCLKMHKEMIFNLQNVLEQWKKKLSSGSQIILALTDDCVPLLAITDATCVIHF
SFPASPKVFGGRLYCMSDHFHAEQGSPAEQGDKKAKSVLLLTEKDASHAVGVLRYLERAD
AKVPAELYEFTAGVLEAKEDKKAGRLLCPYLKAFGFCKDKRICPDRHRINPETDMPRKLS
SQALPSSGYIKIIPFYILNATNYFGRIIDKHVDLYATLNAEMNGYFKDSNKTTVEKVEKF
GLYGLAEKTLFHRVQVLEVSQKEDAWALDDILVEFIDEGRTGLVTRDQLLHLPERFHTLP
PQSVEFIVCRVKPADNEMEWNPKVTRYIHHKIVGKLHVAKVILALGNTVWIDPMVHITNL
SNLKTSVIDYNVRAEILSMGMGIDNPEHIEQLKKLREDAKIPAFEESLSQTLPRVTGTRP
AQDQDRPFKEQEGQGMPPPAEDAARLQSPQPEDTGAEGGAESKMSSENQKPETSSGNTEG
ASISRTAQPPLKSFHPQIKWFQKEDVVILKIRIRNVKDCKCQYFRDRVVFSAWVGDRFYL
ADLELRGNIRKDECKCVIRNEEPVITLAKERREAWCHLLRQRNPNVAFDFDHWEDCEEDS
QFPKVVNSKSLPYTVAEMVEDSSRSTSEDDDSESE
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatcacgctaccccaagccgggcctccaggggcctcggcccatcagtcctccc
ggccaccgcgtggcgctgtgcagggcgttgttgggcggttgggtggcccacgtggtctac
gacgccttaaggcctgctcgggcgtgcgcgggcatccggtcggtgcgggaggcccgaggc
caggcaggcagggagccccgagcgaggggctgtgtcactgctaggacggagcgcgttgcc
tcgggcagaccccggggtccgcaagggcttctggggacgaggagtgtggggcacctgcca
cggggggccgaggcgctaaacgtggagggaaggaaagcactcgcggcgggggcctggcgg
gggcggacgcggccagcctcgcccgtgacggcaggggacttccagggcgagggggcccat
ctgccctccggcgccaggaggatgctccagctcctggtgctgaagattgaagatccaggt
tgcttctgggttattataaaagggtgtagtccctttttagatcatgatgtcgactatcaa
aaattaaatagtgcgatgaacgacttctacaacagcatgtgtcaagatataaaaataaag
ccattaacattggaagaaggacaggtgtgtgtggtctattgtgaggaactaaagtgctgg
tgcagggccattgtcaaatcaattatgtcttctgcagaccagtacctggcagaatgtttc
cttgtggactttgccaagaacattccagtcaaatccaaaaacatccgagttgtagtagaa
tcgtttatgcagcttccctatagagcaaaaaaattcagcctgtactgcacaaagcctgtc
acattacacattgacttctgccgagacagtactgacattgtacctgccaagaagtgggac
agtgcagctattcagtactttcagaaccttctcaaagcaactacccaggtggaagccaga
ttatgtgctgtggaagaagatacatttgaggtttacctttatgtaactataaaagatgaa
aaagtttgtgttaatgatgatcttgttgcaaagaactatgcttgttatatatcacctacg
aagaataaaaaccttcaatatttagaaaaaccaagattgaatataaaatcagcaccctcc
ttcaataaactcaatccagcacttacactctggccgatgtttttgcaaggaaaagatgtt
caaggaatagaagattcacgtggtttaaattttctggcacaatctctacagcatacatgg
cgcaggggtattgtcggtgacctcaggccaacagccacagcaccggacaaagctgtaaaa
tgtaatatggattcgttgagagattcacctaaaaacaaatctgaaaagaaacaccattgc
atctctttaaaagatacaaataagtgtgttgaatcttcagcgtactggccaacaaaaaga
ggcataacgatatatgctgatccagatgtaccagaaggaagtgctttaagtcagaagcca
aatgagaaacctcttagattggctgagaagaaagaatatgatgagaagaatagctgtgtg
aaattactgcagtttttaaatcctgatcctttgagagctgacggaatctctgatctccag
cagttgcagaagctgaagggactgcagccacctgtggcagtgctccgaaacaagattgag
ccctgcttaaccattgactcgtcgccgctgtcagcagacctgaagaaggctcttcaaaga
aatcagtttccgggccccagccacactgagtcttactcttggcctcccatggcgcgtggc
tgtgatgtggttgtcatttctcactgtgaaagcagccctttgctctacctcctaccagtg
ttgacaattttgcaaacaggggcctgctacaagtcattaccaagtagaaatggacctctt
gcagtcattgtgtgccctgggtggaagaaggcccaatttatttttgaattattgggagaa
tatagtatgtcctccaggcctctacatcctgtgctattaacaatcgggctccataaagag
gaagccaaaaatacaaagcttccaagggactgtgatgtgattgttacgaccccatacagc
ctgctgaggcttctctcctgtcagagcctgctgttcctcaggctttgccacctgatcctg
gatgaagtggaggtgctcttcttggaagccaatgaacaaatgtttgctatattagataac
tttaaaaaaaatattgaagttgaagaaagggaatctgcaccacatcagattgttgcagtt
ggagttcattggaacaaacatatagaacatctcatcaaagagttcatgaatgatccctac
attgtgatcacagccatggaagaggctgctctctatggcaatgtccaacaggtagtacat
ctttgcctagaaagtgaaaagacttctactttactccaagctcttgatttcattccgagt
caggcacaaaagaccttgatcttcacctgctctgtagctgaaacagaaatagtgtgtaag
gtagtagaaagcaattcaatattttgcttgaagatgcataaagaaatgatttttaactta
caaaatgttttagaacagtggaagaagaagttaagttctggctctcaaattatattagcc
ctcacagacgactgcgtcccactcttggccatcaccgatgccacgtgtgtaattcacttc
agcttccctgcctcaccaaaagtgtttggtggacgcctgtattgcatgtctgaccatttt
cacgcggaacagggttctcctgcagaacagggagataagaaagccaaatctgtcttgctg
ctgacggagaaagatgcgagccacgcagtgggcgtcctgcgctacttggagcgggcagac
gccaaggtccccgcagagctgtacgagttcaccgcaggagttctggaagccaaagaggat
aagaaagctggaagacttctttgtccgtatctgaaggcttttggtttttgcaaagacaag
aggatctgtcctgaccgacaccgtattaatccagaaacggacatgcccaggaaactgtcc
agccaagccctgccttcatctggatacattaaaataatacctttttatattttgaatgca
acaaattactttggccgtataattgataaacacgtggatctttatgcaactctcaatgct
gaaatgaatgggtattttaaggattctaataaaacaactgtggaaaaggtggagaagttt
ggattgtatggattagcagaaaaaacgctttttcacagggttcaggtgttggaagtgagc
caaaaagaagacgcctgggccctggatgacatccttgtagagttcattgacgaaggcagg
acaggacttgtcacaagggaccagctgctacatctcccagaacgtttccacacacttccc
ccgcagtctgtggagtttattgtctgtagggtgaaacctgcagacaatgaaatggagtgg
aatccgaaggttactaggtacatccatcataaaattgttggaaaattgcatgttgcaaaa
gtgatcctggctttgggaaatacagtttggattgatccaatggtgcacattacaaacctt
tccaatttaaaaacctctgtcattgattataatgttcgagctgaaattttgtccatggga
atgggcattgataatccagaacacatagaacaactgaaaaaattacgtgaagacgcaaag
ataccggcttttgaagaaagcctaagccagaccctgccgagggtgacagggaccaggcct
gctcaagaccaggatcgtccattcaaggagcaggaggggcaggggatgcctcctccagca
gaagatgctgctcgcctgcagagcccccagcctgaggacacaggtgcagaaggaggggct
gagtccaagatgagctcagaaaaccagaagcctgaaacttcatctggaaacactgaaggt
gcctccattagcagaactgcacagccgcctctgaaaagcttccacccacagataaaatgg
ttccaaaaagaagatgtcgtcatcttaaagataagaataaggaatgtaaaggactgcaag
tgtcagtatttcagggatagagtcgttttcagtgcttgggtgggagacagattttacctg
gctgatctggagctgcgaggtaacataaggaaagatgagtgcaaatgtgtaattagaaac
gaggagcctgtgatcactctggccaaagagagaagggaggcatggtgtcacctactcaga
cagaggaaccccaacgtggcttttgattttgatcactgggaagactgtgaagaggacagc
cagttccccaaggtagtgaattctaaaagcctgccgtacacagtggcggagatggttgaa
gacagtagccgcagcacttcagaggatgacgacagtgagagtgaatga
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integrated database retrieval system
