KEGG   Chlorocebus sabaeus (green monkey): 103234884
Entry
103234884         CDS       T04361                                 
Symbol
SYMPK
Name
(RefSeq) symplekin
  KO
K06100  symplekin
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03015  mRNA surveillance pathway
csab04530  Tight junction
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103234884 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    103234884 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csab03021]
    103234884 (SYMPK)
   03019 Messenger RNA biogenesis [BR:csab03019]
    103234884 (SYMPK)
Transcription machinery [BR:csab03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     103234884 (SYMPK)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     103234884 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     103234884 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Cohesin_HEAT
Other DBs
NCBI-GeneID: 103234884
NCBI-ProteinID: XP_007995449
Ensembl: ENSCSAG00000003115
LinkDB
Position
6:complement(39264850..39308912)
AA seq 1343 aa
MPLSRDEAWAGSDCALDSISRRPWVWGACAQFPATNGRWRRRWRSLGRGAAEGARGERRP
EPRDKLTAAMASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSK
ITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLI
ANLNMLLRDENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILL
LDSDNDGIRTHAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEE
GKAALEQLLKFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAK
SQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRD
DSDSTLKKMKLEPNLGEDDEDKDLEPGPSGTSKASAQISSQSDTDITAEFLQPLLTPDNV
ANLVLISMVYLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQ
CKEEPKEEKVVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQ
PRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILAS
LVTQFNSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLS
GLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQF
QYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFG
ADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPI
RGMGMNSPELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFL
IPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHN
IDSVKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPR
LGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPEL
REPLLAHVRSFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLALAPAPA
PRPPQDLIGLRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSLSPSARPGPPPSEEAMDF
REEGPECETPGIFISMDDDSGLTEAALLDSSLEGPLPKETAAGGLTCKEERSPQTLAPIG
EDVVKTPSPAAEDAREPEAKGNS
NT seq 4032 nt   +upstreamnt  +downstreamnt
atgccgctctcacgggacgaggcatgggcggggtcggactgtgctctggactccatttcc
cggcggccctgggtgtggggcgcgtgcgcacagttcccggcgacgaacggaagatggcgg
cggcggtggcggagtctaggaagaggcgctgctgagggggcgcgaggggaacggaggccg
gagccgcgggacaagctgacggcagccatggcgagtggcagtggggacagcgtcacccgc
cggagtgtggcatcacagtttttcactcaagaggaggggccgggaatcgatggcatgacc
acctcagagagggtggtggatcttctgaaccaggcggcgctgatcaccaatgactcaaag
atcacagtgctcaaacaggtccaggagctgatcatcaacaaagaccccacactactggac
aacttcctggacgagatcatcgcattccaagcagacaagtcaattgaagtgcgaaaattt
gtcatcggcttcatcgaggaggcatgcaagcgagacattgagttgctgctgaaactcatt
gcaaacctcaacatgctcttgagggacgagaatgtgaacgtggtgaagaaggctatcctc
accatgacccaactttacaaggtggccctgcagtggatggtgaagtcacgggtcattagc
gagctgcaagaggcctgctgggacatggtatctgccatggcgggggacatcatcttactg
ttggactctgacaatgacggcatccgcacccatgccatcaagtttgtggagggcctcatt
gtcaccctgtcaccccgcatggctgactcggagataccccgacgccaggagcatgatatc
agcctggaccgcatccctcgtgaccacccctacatccagtacaacgtactatgggaagag
ggcaaggcagccttggagcagctgcttaagttcatggtgcaccctgccatctcttccatc
aacctgacaacagcgctgggctccctcgccaatatcgcccgccagagacccatgttcatg
tctgaggtgatccaggcctatgaaactctgcatgccaacctgcccccgacgctggccaaa
tcgcaggtgagcagcgtgcggaagaatctgaagctgcacctgttgagtgtgctgaagcac
ccggcctccttggagttccaggcccagatcaccaccctgctggtggacctgggcacacct
caggctgagatcgcccgcaacatgccgagcagcaaggacacccgcaagcggccccgcgat
gactcggactccacactcaagaagatgaagctggagcccaacctgggggaggacgatgag
gacaaggacttggagccaggcccatcaggaacctcaaaggcctcagcccagatctccagc
cagtcagacacggacatcacagctgagttcctgcagcctctgctgacgcctgataatgtg
gccaatctggtcctcatcagcatggtgtacctgcccgaggccatgccagcctcctttcag
gccatctacacccctgtggagtcagcaggcacagaagcccagatcaagcacctggctcgg
ctcatggccacacagatgacagctgccggactgggaccaggtgtagagcagaccaaacag
tgcaaggaggagcccaaggaggagaaggtggtgaagacagagagcgtcctgatcaagcga
cgcctgtcagcccagggccaagccatctcggtggtgggctccctgagctccatgtcccct
ctggaggaagaggcaccgcaggccaaaaggaggccagagcccattatccctgtcactcag
ccccggctggcaggcgccggggggcgcaagaaaatattccgtctcagcgacgtgctgaag
cccctgactgatgcccaggtggaagccatgaagctgggcgctgtgaagcggatcctgcgg
gctgagaaggctgtggcctgcagcggggcagcccaggtccgcataaagatcctggccagc
ctggtgacacagttcaactcgggcctgaaggcggaggtcctgtccttcatcctggaggat
gtgcgggcccgcctggacctggccttcgcctggctctaccaggagtacaacgcctatctg
gccgcgggtgcctcaggctccctggacaagtatgaggactgccttatccgcctgctgtcc
ggcctgcaggagaaaccagaccagaaggatgggatcttcaccaaggttgtgctggaggcg
ccactcatcacagagagtgccctggaggtgatccgcaagtactgcgaggatgagagtcgc
acctacctgggcatgtccacgcttcgagacctgatcttcaagcgcccgtcccgccagttc
cagtacctgcatgtccttctcgacctcagctcccatgagaaggacaaggtgcgctcccag
gccctgctgttcatcaaacgcatgtatgagaaggagcagctgcgggagtatgtggagaaa
tttgccctcaactacctgcagctcctggtgcaccccaacccaccgtctgtgctgtttgga
gctgacaaagacacagaggtggcagcgccctggacggaggagacagtgaagcagtgtctc
tacctctacctggctctcctgcctcagaaccacaagctgatccacgagctggcggccgtg
tacactgaagccatcgccgacatcaagcggacggtgctgagggtcatcgagcagccgatc
cgaggaatgggcatgaactccccggagctgctcctgctggtggaaaactgtcccaagggg
gcagagacactggtcacacgatgtctgcacagcctcacagacaaagtcccaccctccccg
gagctggtgaagcgggtccgggatctctaccacaagcgactgccagacgtccgcttcctc
atcccggtgctcaatgggctggagaagaaagaggtgatccaggccctgcctaaactcatc
aaactcaaccccatcgtggtgaaggaagtcttcaaccgcctgctgggcacccagcatggt
gagggaaactcagccttgtccccgctgaaccctggagagctcctgatcgcattacacaac
atcgactctgtgaagtgcgacatgaaatccatcatcaaagccaccaacctgtgctttgcg
gagcggaacgtgtacacgtcagaggtgctggccgtggtgatgcagcagctgatggagcag
agccccctgcccatgctgctcatgaggaccgtcatccagtccctgaccatgtacccccgc
ctggggggcttcgtcatgaacatcttgtcccgcctcatcatgaaacaggtgtggaagtat
cccaaagtgtgggagggcttcatcaagtgctgccagcgcaccaagccccagagcttccag
gtcatcctgcagctgccgccccagcagctgggagccgtctttgacaagtgccctgagctc
cgggagcctctgctggcccatgtccgctccttcaccccccaccagcaagctcatatccct
aactccatcatgaccatcttggaggccagcggcaagcaggagccagaggccaaggaagcg
cctgctgggcccttggaggaggacgacctggagcctctggccttggccccggccccggcc
ccccggcccccgcaggacctcattggcctgcggctggcccaggagaaggccttaaagcgg
cagctggaggaggagcagaagctgaagccgggaggagtgggagccccctcctcttcctcc
tcctctctctctccctcggcccggccgggcccgcccccgtctgaggaagccatggatttc
cgggaggaggggcctgagtgcgagaccccgggcatcttcatcagcatggatgacgactca
gggctgaccgaggccgcgctgctggactctagtctcgagggccccctacccaaggagacg
gcagcgggcgggctgacctgtaaggaggagcggagcccccagaccctggcacctattgga
gaagatgtcgtgaagacccccagcccggctgccgaggacgccagggaacccgaggccaag
gggaacagctga

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