Chlorocebus sabaeus (green monkey): 103234929
Help
Entry
103234929 CDS
T04361
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csab03000
]
103234929 (NPAS1)
Transcription factors [BR:
csab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103234929 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
HLH
PAS_4
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
103234929
NCBI-ProteinID:
XP_007995512
Ensembl:
ENSCSAG00000003006
LinkDB
All DBs
Position
6:40363724..40390896
Genome browser
AA seq
603 aa
AA seq
DB search
MAAPYPGSGGGSEVKCVGGRGASVPWDFLPGLMVKASSGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLA
PGRRGPAALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVEMTGS
SVFDYIHPGDHSEVLEQLGLRTPTPGPPTPPSVSSSSSSSSSSLADTPEIGPHNLPSLSV
PEASLTKVPPSSLVQERSFFVRMKSTLTKRGLHVKASGYKQVIHVTGRLRAHALGLVALG
HTLPPAPLAELPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDA
TRIRQSHVDLLDKGQVMTGYYRWLQRAGGFVWLQSVATVAGSGKSPGEHHVLWVSHVLSQ
AEGGQTPLDAFQLPASVACEEVSSPGPEPTELEPPTEGKQAAPAENEAPQTQGKRIKVEP
SPRETKGSEDSGDEDPSSQPATPRPEFTSVIRAGVLKQDPVRPWGLAPPGDPPPALLHAG
FLPPVMRGLCTPGTIRYGPAELGLVYPHLQRLGPGPALPEAFYPPLGLPYPGPAGTRLPR
KGD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctatcccggcagtggcggcggaagcgaggtcaaatgcgtgggaggccgc
ggcgccagcgtcccgtgggactttctacccgggctgatggtcaaggcgtcgtccggacca
tgcctgcaggcgcagcgcaaggagaagtcccggaacgcggcgcgctcgcggcgcgggaaa
gagaacctggagttctttgagctggccaagcttctcccgctgcccggcgccatctcgagc
cagctggacaaggcttccatcgtgcgcctcagcgtcacctacctccgcctgcgccggttc
gccgcgctgggggcgccgccctgggggctgagagctgcggggccgccagctggcctcgcc
ccaggccgccgcggccctgcagcgctggtctccgaagtcttcgagcagcacctgggaggt
cacatcttgcagtccctggatggctttgtgttcgccttgaaccaggaaggaaaattcctc
tacatctcagagacagtctccatctatctgggtctctcacaggtggagatgacgggcagc
agcgtcttcgactacattcaccctggggaccactcggaggtgctggagcaactggggctg
cggaccccgaccccaggccccccaaccccgccctccgtctcctcctcttcctcctcctct
tcctcttcgcttgcggatacccccgagatcggacctcataaccttccttcgctctctgtc
ccagaggccagcctcaccaaggtgcccccctcctccctggtccaggagcgctccttcttt
gtccgcatgaaatccacactcaccaaaagggggctgcacgtcaaggcctcggggtacaag
caggtcatccacgtgactggacgccttcgggcccacgccctgggccttgtggccctcggg
cacacgttgcccccggcccccctggctgagctgccactccacggacacatgatcgtcttc
cgtctcagcctgggtctcaccatccttgcctgtgagagcagagtcagcgaccacatggac
ctggggccctcagagctggtgggccgcagctgctaccagttcgtccacggacaggacgcc
accaggatccgccagagccatgtggacttgctggacaagggtcaggtgatgaccggttac
taccgttggctgcagcgcgccgggggcttcgtgtggctgcaatccgtggccacggtggct
gggagcgggaagagccccggggagcatcatgtgctttgggtcagccacgtgctcagccaa
gccgagggtggccagactcctttggatgctttccagcttccagccagcgtggcctgtgag
gaggtatccagcccggggccagagcccacagagctagagcctccgactgaagggaagcag
gctgccccggcggagaacgaggccccccagacccagggcaaacgcatcaaagtggagccc
agcccgagggaaaccaaaggctcagaggacagtggcgacgaggatccctccagccaaccg
gccaccccgcggcccgagttcacctctgtcatccgggcaggggtcctgaagcaggatccg
gtgcggccatggggcctggcgcctcccggggaccccccgcccgccctcctgcacgcaggc
ttcctgccgccggtaatgcgaggcctgtgcacgcccggcaccatccgctacggccccgcg
gagctgggcctggtgtacccgcacctgcagaggctgggtccgggccccgcgctcccggag
gccttttacccgcccctgggcctgccctacccggggcccgcgggcaccaggctgccgcgg
aagggggactga
DBGET
integrated database retrieval system