Chlorocebus sabaeus (green monkey): 103234960 Help Entry 103234960         CDS       T04361                                  Symbol LIG1 Name (RefSeq) DNA ligase 1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism csab  Chlorocebus sabaeus (green monkey) Pathway csab03030   DNA replication csab03410   Base excision repair csab03420   Nucleotide excision repair csab03430   Mismatch repair Brite KEGG Orthology (KO) [BR:csab00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     103234960 (LIG1)    03410 Base excision repair     103234960 (LIG1)    03420 Nucleotide excision repair     103234960 (LIG1)    03430 Mismatch repair     103234960 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:csab03032]     103234960 (LIG1)    03400 DNA repair and recombination proteins [BR:csab03400]     103234960 (LIG1) Enzymes [BR:csab01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      103234960 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      103234960 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      103234960 (LIG1) DNA replication proteins [BR:csab03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     103234960 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      103234960 (LIG1) DNA repair and recombination proteins [BR:csab03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      103234960 (LIG1)    NER (nucleotide excision repair)     Other NER factors      103234960 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      103234960 (LIG1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase PucR DUF1685 Presenilin Motif Other DBs NCBI-GeneID:  103234960 NCBI-ProteinID:  XP_007995583 Ensembl:  ENSCSAG00000002897 UniProt:  A0A0D9S2P9 LinkDB All DBs Position 6:complement(41354701..41405417) Genome browser AA seq 919 aa AA seqDB search MQRSIMSFFHPKKEGKAKKPEKEASNVSRDTEPPLKAALKEWNGVVSESDSPVKRPGRKA ARVLGSEGEEEDEALSPAKGQKPAPDCSQVSPPHPATSPENNASLSDTSPMDSSPSGIPK RRTARKQLPKRTIQEVLEEQSADEDREAKRKKEEEEVETPEESLTEAEVATEKEGEDRDQ PPTPPKPLKTSEAETPTESVSEPEVATRQELQEEEEQSKPPRGAPKTLSSFFTPRKPAIK KEVKEEEPGAPGKEGAAEGPLDPSSYNPARNNYHPVEDACWKPGQKVPYLAVARTFEKIE EVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ ATGRQLESIRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSAST AKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAV VDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPL KPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHTLEGGEVKIFSRNQEDNTGKYPD IISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAF DLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCE GLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLL ASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPSA VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ SQIQNQQGEDSGSDPEDTY NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaagcatcatgtcattcttccaccccaagaaagagggtaaagcgaagaagcct gagaaggaggcatccaacgtcagcagagacacggagccccctctgaaggcggcactgaaa gagtggaatggagtggtgtccgagagtgactctccagtaaagaggccagggaggaaggcg gcccgggtcctgggcagcgaaggggaagaggaggatgaagcccttagccctgctaaaggc cagaagcctgccccggactgctcacaggtctccccgccccatcctgccacatctcctgaa aacaacgcttccctctctgacacctctcccatggacagctccccatcagggatcccgaag cgtcgcacagctcggaagcagctcccaaaacggaccattcaggaagtcctggaagagcag agtgcggacgaggacagagaagccaaaaggaagaaggaggaggaagaagtggagacccca gaagaaagcctcacagaggctgaagtggcaacagagaaggaaggagaagacagggaccag ccccccacacctcccaagcccctgaagacctccgaagcagagaccccgacggaaagcgtt tcggagcccgaggtggccacgaggcaggagctgcaggaggaggaagagcagagcaagcct ccccgcggcgctcccaagacgctcagcagcttcttcacgccccggaagccagcaatcaaa aaagaagtgaaggaggaggagccaggggctccaggaaaggagggagctgctgagggaccc ctggacccatccagttacaatcctgccaggaacaactaccatcctgtggaagacgcctgc tggaaacccggccagaaggtcccttacctggccgtggcccggacatttgagaagatcgag gaggtgtctgcccggctccggatggtggagacactgagcaacttgctgcgctccgtggtg gccctgtcgcctccagacctcctccctgtcctctacctcagcctcaaccaccttgggcca ccgcagcagggcctggagcttggcgtgggtgatggcgtccttctcaaggcagtggcccag gccacaggtcggcagctggagtccatccgggctgaggcagccgagaagggcgacgtgggg ctggtggccgagaacagccgcagcacccagaggctcatgctgccaccacctccgctcact gcttccggggtcttcagcaagttccgtgacatcgccaggctcactggcagtgcttccaca gccaagaagatagacatcatcaaaggcctctttgtggcctgccgccactcagaagcccgg ttcatcgccaggtccctgagcggacggctgcgtcttgggctggcagagcagtcggtgctg gccgccctctcccaggctgtgagcctcacgcccccaggccaagaattcccaccagccgtg gtggatgctgggaagggcaagaccgcagaggccagaaagacatggctggaggagcaaggc atgatcctgaagcagacattctgcgaggtgcccgacctggaccgaattatccccgtgctg ctggagcatggcctggaacgtctcccggagcactgcaagctgagcccagggattcccctg aaaccaatgttggcccatcccacgcggggcgtcagtgaggtcctgaaacgctttgaggag gcagctttcacctgcgaatacaaatacgatgggcagagggcacagatccacaccctggaa ggcggggaggtgaagatcttcagcaggaatcaggaagacaacactggaaagtacccggac atcatcagccgcatccccaagattaaactcccatcagtcacatccttcattctggacact gaagccgtggcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacc cgcaaacgcaaggaagtggatgcgtccgagatccaggtgcaggtgtgtttgtacgccttc gacctcatctacctcaatggagagtccctggtacgtgagcccctttcccggcgccggcag ctgctccgggagaactttgtggagacggagggcgagtttgtcttcgccacctctctggac accaaggacgtcgagcagatcgccgagttcctggagcagtcggtgaaagactcctgtgag gggctgatggtgaagaccctggatgtcgatgccacctacgagatcgccaagagatcgcac aactggctcaagctgaagaaggactaccttgatggcgtgggtgacaccctggacctggtg gtgatcggcgcctacctgggccgggggaagcgggccggccggtacgggggcttcctgctg gcctcctacgacgaggacagtgaggagctgcaggccatatgcaagcttggaactggcttc agcgacgaggagctggaggagcatcaccagagcctcaaggccctggtgctgcccagcccc cgcccttatgtgcggatagatggtgccgtgactcccgaccactggctggaccccagtgct gtgtgggaggtgaagtgtgccgacctctccctctcccccatctaccctgctgcgcggggc ctggtggatagtgacaaggggatctcccttcgcttccctcggtttattcgggtccgtgaa gacaagcagccggagcaggccaccaccagtgcacaggtggcctgtttgtaccggaagcaa agtcagattcagaaccaacaaggcgaggactcaggctctgaccctgaagatacctactaa

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