Chlorocebus sabaeus (green monkey): 103236375
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Entry
103236375 CDS
T04361
Symbol
LRBA
Name
(RefSeq) LPS responsive beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csab04131
]
103236375 (LRBA)
Membrane trafficking [BR:
csab04131
]
Endosome - Lysosome transport
Others
Others
103236375 (LRBA)
Endosome - Golgi transport
103236375 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103236375 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
103236375
NCBI-ProteinID:
XP_007998164
LinkDB
All DBs
Position
7:complement(96714031..97606153)
Genome browser
AA seq
2857 aa
AA seq
DB search
MASEDNRAPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIRGIRMKFAVLTGLVEVGEV
SNRDIVETVFNLLVGGQFDLEMNFIIQEGESINCMVDLLEKCDITCQAEVWSMFTAILKK
SIRNLQVCTEVGLVEKVLGKIEKVDNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGDK
GQWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLIITSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTAVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFT
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSAMHSIGGVQVLFPLF
AQLDYRQYLSDEVDLTICSTLLAFIMELLKNSIAMQEQMLACKGFLVIGYSLEKSSKSHV
SRAVLELCLAFSKYLSNLQNGMPLLKQLCDHVLLNPAIWIHTPAKVQLMLYTYLSTEFIG
TVNIYNTIRRVGTVLLIMHTLKYYYWAVNPQDRSGITPKGLDGPRPSKKEILSLRAFLLM
FIKQLVMKDSGVKEDELQAILNYLLTMHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LRVIYKLLASKSEGIRVQALKAMGYFLKHLAPKRKVEVMLGHGLFSLLAERLMLQTNLIT
MTTYNVLFEILIEQIGTQVIHKQHPDPDSSVKIQNPQILKVIATLLRNSPQCPESMEVRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCYFNPKNSDEQKITEMVYAIFRILLYH
AVKYEWGGWRVWVDTLSITHSKVTFEIHKENLANIFREQQGKTDEEIGLCSSTSVQAASG
IRRDVNVSVGSQQPGTKDSPVYPHFTTNGNENSSIEKTSSLESASNSELQITNASYEEMK
AEQENQELPDEGTLEETRTNETRNAGDLEVSSDLIEAVTISSNSFITTGKDSMTVSEVTA
ISSPSEEDASEMPEFLDKSVVEEEEDDDYVELKVEGSPTEEANLPTELKDNSLSPAASEA
SEKLDMFGDDHKLVFQEGKPAAEKQTDTETQDSKDSGIQTMTASGSSVMSPETTVSQKAV
ESDLGQMLEEGKKATNLTGETKLLSDCHGSVSEAASSEQKIAKLDVSSVATDTERLELKA
STNVEAPQPHRHVLEISRQHEQPGQGIAPDAVNGQRRDSRSTVFRIPEFNWSQMHQRLLT
DLLFSIETDIQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLISQVMDNMVMACGGILPLLS
AATSATHELENIEPTQGLSIEASVTFLQRLISLVDVLIFASSLGFTEIEAEKSMSSGGIL
RQCLRLVCAVAVRNCLECQQHSQLKTRGDKALKTIHSLNPLGKSAAKSPVDIVTGGISPV
RDLDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERHS
QSFTETGSENGNVSLSEITPAAFSTLTTASVEESESTSSARRRDSGIGEETATGLGSHVE
VTPHTASPGVSAGPDAISEVLSTLSLEVNKSPETKNDRGNELDTKATPSVSVSKNVNVKD
ILRSLVNIPADGVTVDPALLPPACLGALGDLSVEQPVQFRSFDRSVIVAAKKSAVLPSTF
TTSIPTNAVSVVSSADSAQASDVGGESPGSRSSNAKLPSVPTVDSVSQDPVSNMSITERL
EHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQ
EWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEAEFILSRQRAEDIHRHAEFESL
CAQYSAEKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILTDKHGAWGNSAVSRPREFW
RLDYWEDDLRRRRRFVRNPLGSTHPEATLKTAVEHATDEDILAKGKQSIKSQALGNQNSE
NEILLEGDDDTLSSVDEKDLENLAGPVSLSTPAQLVAPSVVVKGTLSVTSSELYFEVDEE
DPNFKKIDPKILAYTEGLHGKWLFTEIRSIFSRRYLLQNTALEIFMANRVAVMFNFPDPA
TVKKVVNYLPHVGVGTSFGLPQTRRISLASPRQLFKASNMTQRWQHREISNFEYLMFLNT
IAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERYESW
EDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQ
RDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLAL
ESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGAVNLNSITDPVLREAIEAQI
RSFGQTPSQLLIEPHPPRGSAMQVYLLLQSPLMFTDKAQQDVIMVLKFPSNSPVTHVAAN
TQPGLATPAVITVTANRLFAVNKWHNLPAHQGAVQDQPYQLPVEIDPLIASNTGMHRRQI
TDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLIQVVFGHWDVVTCLAR
SDSYIGGNCYILSGSRDATLLLWYWNGKCSGIGDNPGSETAAPRAILTGHDYEVTCAAVC
AELGLVLSGSQEGPCLIHSMNGDLLRTLEGPENCLKPKLIQASREGHCVIFYENGLFCTF
SVNGKLQATMETEDNIRAIQLSRDGQYLLTGGDSGVVVVRQVSDLKQLFAYPGCDAGIRA
MALSYDQRCIISGMASGSIVLFYNDFNRWHHEYQTRY
NT seq
8574 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgaagacaatcgtgccccttccccgccaccaacaggtgatgacgggggaggt
ggagggagagaagaaacccctactgaagggggtgcattgtctctgaaaccagggctcccc
atcaggggcatcagaatgaaatttgccgtcttgaccggtttggttgaagttggagaagta
tccaatagggacattgtagaaactgtctttaacctgttggtaggaggacagtttgatttg
gaaatgaatttcatcatccaagaaggtgagagtatcaactgcatggtggacctactggaa
aaatgtgacattacttgccaagcagaagtctggagcatgtttacagctattctgaagaaa
agcatacggaatcttcaagtctgcactgaagtaggccttgttgaaaaagtgcttgggaaa
attgaaaaagttgacaatatgatagcagatcttttagttgacatgttgggagtgctggct
agctataatttgacagttcgcgagctaaagcttttcttcagtaaacttcaaggagataaa
ggacaatggcctccacatgctgggaagttgctgtctgtgttaaaacatatgcctcagaag
tatggtcctgatgccttttttaactttccaggaaagagtgctgcagctattgcattacct
cctatagccaaatggccgtaccagaatggttttacatttcatacatggcttagaatggat
cctgtaaataacatcaatgtagataaggataaaccatatttgtattgtttcagaaccagc
aaaggtcttggctattctgctcattttgttggaggctgtttgattataacatcaataaag
tcaaaaggaaaaggctttcaacattgtgtgaaatttgatttcaagccacaaaagtggtat
atggttaccatagtgcacatctataatcgatggaagaatagtgaacttcgatgttatgtg
aatggtgaactggcttcctatggagagataacatggtttgtcaacactagtgataccttt
gacaaatgtttcctgggctcatcagaaacagcagatgctaatagagtattctgtggccag
atgactgcagtttaccttttcagtgaagctcttaatgcagctcagatatttgctatttat
cagttgggcctgggatacaagggtacatttaagttcaaagcagaaagcgaccttttccta
gctgagcatcacaaacttctattgtacgatgggaaactctctagtgccattgcgttcacg
tacaatccacgggctacagatgcccaactttgccttgaatcatctcctaaggacaaccct
tcaatttttgttcattcaccacatgctctcatgctccaggatgtaaaggcagttttaaca
cattccatccaaagtgcaatgcattcaattggaggagtacaagtactatttccacttttt
gcacagttggattacaggcaatatttgtctgatgaggttgatttgactatatgttcaacc
ttgctggcctttatcatggaattgttgaagaactcaattgctatgcaggagcagatgctt
gcctgtaagggcttcttggtaataggatatagccttgaaaagtcttccaaatctcatgtc
agcagagcagtacttgaactttgccttgcattttcaaaatatctgagtaatctgcagaat
gggatgcccctgctcaagcagttgtgtgatcacgttcttcttaatcctgccatatggatt
cataccccagccaaggttcaattgatgctctatacttatctgtccacggaattcattggt
acagtcaacatatataacaccattcggagagttggaacagtgctcctcatcatgcacacg
ctgaagtactactactgggcagtgaatcctcaggatcgaagtggtattaccccaaaagga
ttagatggaccgcgacctagtaaaaaagaaatactttctctacgagcattcttgttgatg
ttcattaagcaattagtgatgaaggattctggagtaaaggaagatgaattacaggccatt
cttaattacctactgactatgcatgaggatgacaatctaatggatgtcctacagctgctt
gttgcattaatgtcagaacaccctaactctatgattcctgcttttgaccaaaggaacggg
ttacgtgttatctacaaacttctggcatcgaaaagcgaaggaatcagggtacaagctctt
aaggcaatgggttattttttaaaacatctggccccaaagaggaaagttgaagtcatgctt
ggacatggattgttttcattgctagctgaaaggctcatgcttcagacaaatttaatcaca
atgaccacatataatgtcctgtttgagattcttatagaacagattggtactcaggtgata
cataaacagcatccagatcctgattcttcagtaaagatacaaaaccctcagatactgaaa
gtaattgcgaccctacttcgaaattctccccagtgcccagagagcatggaggttcgcaga
gcctttctttctgacatgattaaactttttaataacagtagagaaaacaggaggagcttg
ctacaatgctctgtgtggcaagaatggatgctttctctctgctattttaatcctaagaat
tcggatgagcaaaagataacagaaatggtatatgccatattcagaatcctgctttaccat
gcagtcaaatatgagtggggtggctggcgtgtatgggtagacactttatcaatcactcat
tcaaaggtcacttttgaaatacacaaagaaaaccttgccaatatatttagggaacagcaa
ggaaaaactgatgaagaaatagggctgtgttcttcaacttcagttcaagcagcctctggc
attagaagggatgttaacgtttcagtaggatcccagcaaccaggtacgaaggattctcct
gtctatcctcatttcaccacaaatggtaatgaaaattcaagtatagagaagacaagttca
ctagaatctgcatctaatagtgaactgcaaattactaatgcatcttatgaagaaatgaaa
gctgagcaagaaaatcaggagttaccagatgaaggcactttggaagagacacggacaaat
gaaacaaggaatgcaggtgatttagaagtatcttctgacttaatagaagctgtgactatt
tcctctaattcttttataacaactggcaaagattcaatgactgtcagtgaagtaactgct
ataagttctccttcagaagaggatgcttcagaaatgccagaattcttggataagtctgta
gtagaggaagaggaagacgatgattatgtggaactgaaagtagaaggcagtcctactgag
gaagctaatctacccacagagctcaaagataacagtttgtctccagctgcatcggaagcc
agtgaaaaactggacatgtttggtgatgatcacaaattagtatttcaagaaggaaaacct
gctgctgaaaagcaaactgatactgaaactcaagattctaaagattctggaattcagact
atgacagcatcagggtcttcagttatgtcaccagaaactactgtttcccaaaaagctgta
gaatcagaccttggtcagatgctggaggaagggaagaaagcaactaacctcactggagaa
accaaattacttagtgattgtcatggtagtgtctctgaggctgcttcttctgagcaaaag
attgccaagttggatgtttccagtgttgctacagatactgagaggctggagttgaaggcc
agtacaaacgtggaagcacctcagcctcatcgacatgtgcttgagatatcaaggcaacat
gagcagccagggcaaggaatagcaccagatgcagttaatggacaaaggagggattccaga
tctactgtgtttcgtattcctgagttcaactggtctcagatgcatcaacgtttgctcact
gatctattattttcaatagaaacagatatacagatgtggagaagccattcaacaaagaca
gttatggacttcgtgaatagcagtgataatgtcatctttgtacacaacacaattcatctc
atctctcaagtgatggacaatatggtcatggcttgtgggggtatactgccattgctttca
gctgctacatcggctacacatgaactggaaaatattgaaccaactcaaggcctttcaata
gaagcctctgtgacatttttgcagaggctaattagccttgtggatgtgcttatatttgca
agttctcttggctttactgaaattgaagctgaaaaaagtatgtcatctggaggaattttg
cggcagtgtctccgactagtttgtgcagtagcagtaaggaattgcttggagtgtcaacag
cattcacaactgaaaactaggggagataaagccttgaaaacaatacatagccttaatccc
ttagggaaatctgcagcgaagagcccagtggacattgtgactggcggtatatctccagta
agagatcttgacaggcttctacaggacatggatattaatcgacttagagcagttgttttc
agagatatagaggatagcaaacaagctcaatttttagccttggcagtagtatactttatc
tctgttcttatggtctccaagtacagagacattttggaaccccaaaatgaaaggcatagc
cagtcatttacggaaactggcagtgaaaatgggaatgtatcactctccgaaatcacacca
gcagcattcagcactttaactacggcatcagtggaagaatctgaaagcacatcatctgct
cgaaggagggactcaggcattggggaagaaacagccactggtttaggaagccatgtggaa
gtaactcctcacacagcatctcctggagttagtgcaggcccagatgcaatcagcgaggtg
ctatctactctttctttagaagtcaataagtctccggaaaccaaaaatgacagaggaaat
gagttggacactaaggctacgccgtcagtttcggtttcaaaaaatgtcaatgtgaaagac
attctccgaagcttggttaacataccagcagatggagtcacagtggatcctgcccttctg
ccaccagcctgccttggagcccttggtgatctgtctgtggagcaacctgtgcagttcaga
tcttttgacagaagtgtcattgttgcagcaaaaaaatcagcagtcttaccttccaccttt
actacaagcatacctaccaatgctgtcagtgtggtttcctcagcagattcagcccaagcc
tcagatgtgggaggagaatctccaggcagtagatcatctaatgcaaaattgccctcggtt
ccaacagttgattcagtttcacaagacccggtttcaaatatgagtattacagagaggctt
gaacatgctttggaaaaggcagctcctctccttcgtgagatttttgtggattttgcacct
tttctttctcggacacttttgggtagccatggacaagaactacttatagaaggaacaagt
ctggtttgcatgaagtctagcagttcagttgtggaattggttatgctactgtgttctcag
gagtggcaaaattctattcagaagaacgcaggccttgcttttatcgaacttgtcaatgaa
ggaagattgcttagccagacaatgaaagatcatctagtaagagtagcaaatgaagctgaa
tttatcctgagcaggcagagagcagaagatattcacagacatgcggaatttgagtcactg
tgtgcccagtattctgcagagaaacgagaagatgagaagatgtgtgatcatttgataaga
gcagcaaaatatcgtgaccatgtgacagcaactcaactaatccagaaaattatcaacatt
ctcacagacaagcatggagcctggggaaattctgcagtgagtcgtcctcgtgagttctgg
cgccttgactactgggaagatgacttgcggcgccggcgacgatttgtgcgtaaccctcta
ggatcgacacatcctgaagcgacactaaaaacagccgtggaacatgccacagatgaagat
atccttgctaaaggaaaacagtccatcaagagtcaggctttaggaaatcagaactcagaa
aacgagatcctcctggaaggcgatgatgatactctgtcatccgtggatgagaaagattta
gagaatcttgctggtcctgttagcctgagcacaccagctcagcttgtggccccctcggtt
gtagtaaagggcactctttctgtcacctcctccgaactctattttgaggtggatgaagag
gatcctaacttcaaaaaaatcgaccccaagatcctggcgtatacagaaggactgcatgga
aaatggctgttcacagagatacgatcaatcttttctcgtcgttatcttttgcaaaataca
gccctggagatctttatggcaaacagagttgctgtaatgttcaacttcccagaccctgca
acagtaaagaaagtagttaactatctacctcatgttggcgttggtacaagttttggattg
cctcaaaccagacgtatttcattagctagtccacgtcagctttttaaggcttctaacatg
acccagcgatggcaacacagagagatttctaattttgagtacttgatgtttctcaacacg
atagcaggacggagttataatgacttaaatcagtatccggtgtttccttgggtcatcact
aattatgaatcagaagaactggatcttaccttgcccaccaacttcagagatttgtccaag
ccaataggagctctgaacccaaaaagagcagcattcttcgcagagcgctatgaatcatgg
gaagacgatcaagttccaaagtttcactatggtactcattactcaactgcaagttttgtt
cttgcatggctgctaagaatagaaccttttacaacttatttcctaaatttgcaaggaggc
aaatttgatcatgcagatcgaactttttcatcaatttccagagcttggcgaaacagtcag
cgtgatacatctgatattaaggagttgatccctgaattttattatctccctgagatgttt
gtcaacttcaataattataatcttggagtgatggatgatgggacagtagtgtctgatgtt
gaacttcctccttgggccaaaacctcagaagaatttgttcacataaacagattggctctg
gagagtgaatttgtttcctgccagcttcaccaatggattgatctcatttttggctataaa
cagcaaggaccagaggctgtccgagccctcaatgtgttctattacttgacctatgaagga
gctgtcaatctgaattcaataactgatcctgtgttgagagaggctattgaagctcaaatt
cgaagttttggacagactccttctcaactactcatagagccccatcctcccagaggttct
gccatgcaagtgtatctcctcctgcagagtccattgatgttcacagacaaagcccagcag
gatgttatcatggtcctcaagtttccctccaactcccctgttactcacgtggcagccaac
acccagcctggtttggcaactcctgctgtgatcacagttactgctaacaggttatttgct
gtgaacaaatggcacaaccttcctgctcatcaaggtgctgtacaagaccagccataccag
ctgccagtggaaatcgatcctctcatagccagcaatacaggaatgcacaggaggcaaatc
actgaccttttagaccaaagtattcaagtgcattcccagtgctttgtcatcacttcagac
aaccgctatattctcgtctgtggcttctgggataagagtttcagagtctattctacagac
acaggaaaattgatccaagtggtgtttggccattgggatgtcgtcacttgcctcgctcgt
tctgattcatatattgggggaaattgctacattctctcagggtcacgtgatgcaactctt
ttgctgtggtattggaatggaaaatgcagtgggattggagataacccaggcagtgagact
gctgctcctcgggccattttgacaggccatgactatgaggtcacatgtgctgcggtctgt
gctgagctaggcctggtgttgagtggttcacaagaaggaccatgtctcatacattccatg
aatggagacttgttgaggaccttggagggtcctgaaaactgcctgaaaccaaaactcatt
caggcttcaagagagggtcactgtgtcatattctatgaaaacggcctcttctgtacattc
agtgtgaatggaaaactccaggccacgatggaaacagaagataacataagagccatccag
ctgagccgagatgggcagtacctgctcacaggaggggacagcggagtggtcgtggtccgg
caggtgtcggacctcaagcagctctttgcctatccaggatgtgacgcaggaatccgggcc
atggcactgtcttatgaccagaggtgcatcatttctggcatggcttcaggaagcattgtg
ctattttacaacgactttaaccggtggcatcatgaataccaaacccgctactga
DBGET
integrated database retrieval system
