Chlorocebus sabaeus (green monkey): 103238216 Help Entry 103238216         CDS       T04361                                  Symbol COL2A1 Name (RefSeq) collagen type II alpha 1 chain   KO K19719   collagen type II alpha Organism csab  Chlorocebus sabaeus (green monkey) Pathway csab04151   PI3K-Akt signaling pathway csab04510   Focal adhesion csab04512   ECM-receptor interaction csab04974   Protein digestion and absorption csab05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:csab00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     103238216 (COL2A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     103238216 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     103238216 (COL2A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     103238216 (COL2A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     103238216 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:csab00536]     103238216 (COL2A1) Glycosaminoglycan binding proteins [BR:csab00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    103238216 (COL2A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  103238216 NCBI-ProteinID:  XP_008001215 Ensembl:  ENSCSAG00000006460 LinkDB All DBs Position 11:complement(44196213..44227718) Genome browser AA seq 1600 aa AA seqDB search MLSAAVLEQQLWWCWAPPSTPRGSGYGAGSFLGQSFNPTFHSANVCERAVSRAAATESPS GSYTQRSLAPPLRPRIPGRPSPRNLIRTGSGPSPSFSLSPPWVLMGVGGLFLSLGWGALT DASSPTPSSPPAFYCSSYFNEEAGSCVQDGQRYNDKDVWKPEPCRICVCDTGTVLCDDII CEDVKDCLSPEIPFGECCPICPTDLATASGWQPGPKGQKGEPGDIKDIVGPKGPPGPQGP AGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGF DEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGP PGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGV KGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGF PGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGI AGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGE EGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGD PGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGP KGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGL PGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQGARGLPGTPGT DGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGL TGPIGPPGPAGANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGA KGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGP PGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGA DGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGL TGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGSPGPPGSPGPAGPTGKQGD RGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGERGLKGHRGFTGLQGLPGPPGP SGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGP PGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRADQAAGGLRQHDAEVDATLKSLNNQIE SIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPN PANVPKKNWWSSKSKEKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQ NITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTALKDDCTKHTGKWGK TVIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL NT seq 4803 nt NT seq  +upstreamnt  +downstreamnt atgctatcggcagccgttttggagcagcaattatggtggtgctgggctcctccgtccaca cctaggggatccggttacggcgctggctcctttctggggcagtcatttaatcccactttt cactctgccaatgtctgtgagcgagccgtgtccagagccgcagccacagagtcacccagc ggctcttacacccagcgcagcctggccccgcccctgcgcccgcgcatcccgggccgccct tccccgcgaaatctgatccgcacggggagtggcccctctccaagcttttccctctctccg ccctgggtcctcatgggtgtgggtgggctcttccttagtctgggctggggcgcattaacc gacgcctcctctcccacaccttcctcaccgcctgcattctactgctccagctattttaac gaggaggctggcagctgtgtgcaggatgggcagaggtataatgataaggatgtgtggaag ccggagccctgccggatctgtgtctgtgacactgggactgtcctctgcgacgacataatc tgtgaagacgtgaaagactgcctcagccctgagatccccttcggagagtgctgccccatc tgcccaactgacctcgccactgccagtggttggcaaccaggaccaaagggacagaaagga gaacctggagacatcaaggatattgtaggacccaaaggacctcctgggcctcagggacct gcaggggaacaaggacccagaggcgatcgtggtgacaaaggtgaaaaaggtgcccctgga cctcgtggcagagatggagaacctgggacccctggaaatcctggcccccctggtcctcct ggcccccctggtccccctggtcttggtggaaactttgctgcccagatggctggaggattt gatgaaaaggctggtggcgcccagatgggagtaatgcaaggaccaatgggccccatggga cctcgaggacctccaggccctgcaggtgctcctgggcctcaaggatttcaaggcaatcct ggtgaacctggtgaacctggtgtctctggtcccatgggtccccgtggtcctcctggtccc cctggaaagcctggtgatgatggcgaagctggaaaacctggaaaagctggtgaaagaggt ccgcctggtcctcagggtgctcgcggtttcccaggaaccccaggccttcctggtgtcaaa ggtcacagaggttatccaggcctggacggtgctaagggagaggcgggtgcccctggtgtg aagggtgagagtggttccccaggtgagaacggatctccgggcccaatgggtcctcgtggc ctgcctggtgaaagaggacggactggccctgctggtgctgcgggtgcccgaggcaacgat ggtcagccaggccccgcagggcctccgggtcctgtcggtcctgctggtggtcctggcttc cctggtgctcctggagccaagggtgaagccggccccactggtgcccgtggtcctgaaggt gctcaaggtcctcgtggtgaacctggtactcctgggtcccctgggcctgctggtgcctct ggtaaccctggaacagatggaattcctggagccaaaggatctgctggtgctcctggcatt gctggtgctcctggcttccctgggccacggggacctcctggccctcaaggtgcaactggt cctctgggcccgaaaggtcagacgggtgaacctggtattgctggcttcaaaggtgaacaa ggccccaagggagaacctggccccgctggcccccagggagcccctggacccgctggtgaa gaaggcaagagaggtgcccgtggagagcctggtggtgttgggcccatcggtccccctgga gaaagaggtgctcctggcaaccgcggtttcccaggtcaagatggtctggcaggtcccaag ggagctcctggagagcgagggcccagtggtcttgctggtcccaagggagccaatggtgac cctggccgtcctggagaacctggacttcctggagcccggggtctcactggccgccctggt gatgctggtcctcaaggcaaagttggcccttctggagcccctggtgaagatggtcgtcct ggacctccaggtcctcagggggctcgcgggcagcctggtgtcatgggtttccctggtccc aaaggtgccaatggcgagcctggcaaagctggtgagaagggactgcctggtgctcctggt ctgagaggtcttcctggcaaagatggtgagacaggtgctgcaggaccccctggccctgct ggacctgctggtgaacgaggcgagcagggtgctcctgggccatctgggttccagggactt cctggccctcctggtccgccaggtgaaggtggaaaaccaggtgaccagggtgttcccggt gaagctggagcccctggcctcgtgggtcccaggggtgaacgaggtttcccaggtgaacgt ggctctcccggttcccaaggcctccaaggtgcccgtggcctccccggcactcctggcact gatggtcccaaaggtgcatctggcccagcaggcccccctggggctcagggccctccaggt cttcagggaatgcctggcgagaggggagcagctggtatcgctgggcccaagggtgacagg ggtgatgttggtgagaaaggccctgagggagcccctggaaaggatggtggacgaggcttg acaggtcctattggcccccctggcccggctggtgctaatggcgagaagggagaagttgga cctcctggtcctgcaggaagtgctggtgctcgtggcgctccgggtgaacgtggagagact gggccccctggaccagcaggatttgctgggcctcccggtgctgatggccagcctggggcc aagggtgagcaaggagaggccggccagaaaggcgacgctggtgcccctggtcctcagggc ccctctggagcgcctgggcctcagggtcctactggagtgactggtcctaaaggagcccga ggtgcccaaggccccccaggagccaccggattccctggagctgctggccgcgttggaccc ccaggctccaatggcaaccctggaccccctggtccccctggtccttctggaaaagatggt cccaaaggtgctcgaggagacagcggcccccctggccgagctggtgaccctggcctccaa ggtcctgctggaccccctggcgagaaaggagagcctggagatgatggtccctctggtgcc gatggtccaccaggtccccagggtctggcgggtcagagaggcatcgtcggtctgcctggg cagcgtggtgagagaggattcccaggcttgcctggcccatcgggtgagcccggcaagcag ggcgctcctggagcatctggagacagaggtcctcctggccccgtgggtcctcctggcctg accggtcctgcaggtgaacctggacgagagggaagccccggcgctgatggcccccctggc agagatggtgcagctggagtcaagggtgatcgtggtgagactggtgctgtgggagctcct ggatcccctgggccccctggctctcctggccccgctggtccaactggcaagcagggagac agaggagaagctggtgcacaaggccccatgggaccctcaggaccagctggagcccgggga atccagggtcctcaaggcccccgaggtgacaaaggagaggctggagagcctggcgagaga ggcctgaagggacaccgtggcttcactggtctgcagggtctgcccggccctcctggtcct tctggagaccaaggtgcttctggtcctgctggtccttctggccctagaggtcctcctggc cctgtcggtccctctggcaaagatggtgctaatggaatccctggccccattgggcctcct ggtccccgtggacgatcaggcgaaactggccctgctggtcctcctggaaatcctggaccc cctgggcctccaggtccccctggccctggcatcgacatgtccgcctttgctggcctaggc ccgagagagaagggccccgaccccttgcagtacatgcgggctgaccaggcagccggtggc ctgagacagcatgatgcagaggtggatgccacactcaagtccctcaacaaccagattgag agcatccgcagccccgagggctcccgcaagaaccctgcacgcacctgcagagacctgaaa ctctgccatcctgagtggaagagtggagactactggattgaccccaaccaaggctgcacc ttggacgccatgaaggttttctgcaacatggagactggtgagacttgcgtctaccccaac ccagcaaacgttcccaagaagaattggtggagcagcaagagcaaggagaagaaacatatc tggtttggagaaaccatcaatggtggcttccatttcagctatggagatgacaacctggct cccaacactgccaacgtccagatgaccttcctacgcctgctttccacggaaggctcccag aacatcacctaccactgcaagaatagcattgcctacctggacgaagcagctggcaacctc aagaaggccctgcttatccagggctccaatgatgtggagatccgggcagagggcaatagc aggttcacgtacactgccctgaaggatgactgcacgaaacacaccggtaagtggggcaag actgtcatcgagtaccggtcacagaagacctcacgactccccatcattgacattgcaccc atggacataggagggcccgagcaggaattcggtgtggacatagggccggtctgcttcttg taa

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