Chlorocebus sabaeus (green monkey): 103238294
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Entry
103238294 CDS
T04361
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03082
ATP-dependent chromatin remodeling
csab04714
Thermogenesis
csab05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103238294 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103238294 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103238294 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103238294 (SMARCD1)
03036 Chromosome and associated proteins [BR:
csab03036
]
103238294 (SMARCD1)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103238294 (SMARCD1)
Chromosome and associated proteins [BR:
csab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103238294 (SMARCD1)
PBAF complex
103238294 (SMARCD1)
GBAF(ncBAF) complex
103238294 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103238294
NCBI-ProteinID:
XP_008001395
Ensembl:
ENSCSAG00000005990
LinkDB
All DBs
Position
11:46313998..46328672
Genome browser
AA seq
644 aa
AA seq
DB search
MPCAKMKLLLQAPLHQRARVGVETGAEAVVRPPFQVLVYLPSAWGRPLTGPLYPRVLLYG
FPSRTVKAGGRGQHAFSASRSSLGNSLAALSLPCRPAGRGNRRALGGRSGGGGSSGSGSL
CSCIGGSGKMAARAGFQSVAPSGGAGTSGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRS
PMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQV
QQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEA
LKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR
KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQ
PPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQR
MKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLST
ASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVG
NPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcgccaagatgaagctattactccaagcacctcttcatcagcgggctcgagtc
ggggttgagacgggggctgaggctgtggtccgtccccctttccaggtccttgtctacctc
ccgtcggcctgggggcgcccgctcacggggcctctctatcccagagttcttctctatggt
tttccctccaggaccgtgaaggcgggagggcgtggccagcacgccttttccgctagtcgc
tcctctctaggcaacagtctcgctgccctgagcctcccgtgccggccagccggccggggg
aacaggcgggcgctcggggggcgctcggggggcggggggagttccggttccggttctttg
tgcagctgcatcggcggctccgggaagatggcggcccgggcgggtttccagtctgtggct
ccgagcggcggcgccggaacctcaggaggggcgggcgcggctgctgccctgggcccgggc
ggaactccggggcctcccgtgcgaatgggcccggctccgggtcaagggctgtaccgctcc
ccgatgcccggagcggcctatccgagaccaggtatgttgccaggcagccgaatgacacct
cagggaccttccatgggaccccctggctatggggggaacccttcagtccgacctggcctg
gcccagtcagggatggatcagtcccgcaagagacctgcccctcagcagatccagcaggtc
cagcagcaggctgtccaaaatcgaaaccacaatgcaaagaaaaagaagatggctgacaaa
attctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggatctcttg
gcttttgaaaggaaactggaccagactatcatgaggaaacgactagatatccaagaggcc
ttgaaacgtcccatcaagcaaaaacggaagctgcgaattttcatttctaacactttcaat
ccggctaagtcagatgccgaggatggggaagggacggtggcttcctgggagcttcgggta
gaaggacggctcctggaggattcagccttgtccaaatatgatgccactaaacaaaagagg
aagttctcttccttttttaagtccttggtgattgaactggacaaagacctgtatgggcca
gacaaccatctggtagaatggcacaggaccgccactacccaggagaccgatggctttcag
gtgaagcggccgggagacgtgaatgtacggtgtactgtcctactgatgctggattaccag
cctccccagtttaaattagacccccgcctagctcggctcttgggcatccacacccagact
cgtccagtgatcatccaagcactgtggcaatatattaagacacataagctccaggaccct
catgagcgggagtttgtcatctgtgacaagtacctgcagcagatctttgagtctcaacgt
atgaagttttcagagatcccgcagcggctccatgccttgcttatgccaccagaacctatc
atcattaatcatgtcatcagtgttgacccgaatgatcagaaaaagacagcttgttatgac
attgatgttgaagtggatgacaccttgaagacccagatgaattcttttctgctgtccact
gccagccaacaggagattgctactctagacaacaagatccatgagacaatagaaaccatc
aaccagctgaagactcagcgggagttcatgctgagctttgccagagaccctcagggtttc
atcaatgactggcttcagtcccagtgcagggacctcaagacaatgactgatgtggtgggt
aacccagaggaggagcgccgagctgagttctacttccagccctgggctcaggaggctgtg
tgccgatacttctactccaaggtgcagcagagacgacaagaattagagcaagccctggga
atccggaatacatag
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