Chlorocebus sabaeus (green monkey): 103239724 Help Entry 103239724         CDS       T04361                                  Symbol SETX Name (RefSeq) senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism csab  Chlorocebus sabaeus (green monkey) Pathway csab05014   Amyotrophic lateral sclerosis Brite KEGG Orthology (KO) [BR:csab00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     103239724 (SETX)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:csab03021]     103239724 (SETX) Enzymes [BR:csab01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      103239724 (SETX)     5.6.2.5  RNA 5'-3' helicase      103239724 (SETX) Transcription machinery [BR:csab03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      103239724 (SETX) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 AAA_19 AAA_30 UvrD-helicase AAA_22 ResIII Helicase_RecD nSTAND3 AAA_16 UvrD_C_2 Motif Other DBs NCBI-GeneID:  103239724 NCBI-ProteinID:  XP_008004055 Ensembl:  ENSCSAG00000014918 LinkDB All DBs Position 12:5773122..5872372 Genome browser AA seq 2708 aa AA seqDB search MSTCCWCTPGGGSTVDFLKRYASNTPSSEFQTADEDLCYCLECVAEYHKARDELPFLHEV LWELETLRLINHFEKSMKAEIGDDDELYIVDNNGEMPLFDITGQDFENKLRVPLLEILKY PYLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNDMVRRWAILTARNLGK VDRDDYYDLQEVLICLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLG ICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRL GSKVWGQLIDPIEAFQTIINNASYNREIQHIRNSSVRTKLEPESYLDDMVTCSQIVYNYN PEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD LKDLGVAYIVEVVHHLYSEVKDVLNQTDAMCDKVTEFFLLILVSVIELHRNKKCLHLLWV SSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLSLHSMPSNSVQLACVQLIR SLLKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKAP PCNTFVDLTSTCKTSPASYNKEESEQIGKKSRKDMHCLEASSPTFSKEPMKAQDSVLIKA DNTVEGDNDEQNYIKDVKLEDQLSAGSCLKQSSENIFTERAEDEIKISTRKQKSVKENSS YTPEDCTSRNGPERGCDRGIIVSTRLLTDSSTDALEKVSTSNEDFSLKDDAFAKTSKQKT KVQKDEICAKLSHVIKKQHRKSTLVNNTINLDENLTVSNIERFYSRKDTGVQKGDGFIHN LSLDPSGVLDDNKNGEQKSQNNLLPEEKQLKNEELDIFYSHENNCEIQEFHVDDKDSIPF TEMANTLEKKSSSFKDLMTVPESRDEAMSNSTNVIYSNLTREQAPGISPKSDTLTDSQID RDLHKLSLLAQASVITFPSDSPQNSSQLQRKGKEDKRCFTANQNNVGDCSRGQVIIISDS DDDDDDERILSLEKLTKDKRCLEKERPKQHISTVKEKKNPVKEEKTKSLFQFEESDSQCF EFESASEVFSVWQDHLDNNNSVQDGEKKCLTPIANTTNGQDCTDYVSEVVKKGAEGIEEH ARPQSSRISVEEFCEIEVKKPKRKRSEKPIPEDPVRPSSSVGNEGQSDTNKRDLIGNDFK SIDRRTTTPNSSIQRATTVSQKKSSKLCTYIEPVRKVPVSKTSKKTHSDAKKGQNRSSNY LSCRTTPAIVPPKKFRQCPEPTSTVEKLGLKKGPRRAFELSQRSLDYVAQLRDHGKTVGV VDTRKKTKLISPQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRQRLSDCESTDTTRAGPH TAQNSDLLVPESDRSDYDCTGGTEVLANSNEKQLIKCMPSEPETIKAKHGSPATDGACPL NQCDSIVLNGTIPTSEVIVCTSEDPLGGGDPTAHHTEMATLNEGEPDSSSDIEEDNLFLT QNDPEDMDLCSQMENDNFKFIELIHGKDTVQVEEDSVSLPQLESLSGTKCKYKDCLETTK NQGEYCPQHSEVKAADEDVFRKPGLPPSASKPLRPTTAKIFSSKSTSRIAGLSKSLETSS ALSPSLKNKSKGIQSILKVPQPAPLVAQKPVGEMKNSSNVLHPQSPNNSNRQGCKVPFAE SKYFPSSSPVNILLSSQSVSDTFVKEVLKWKYEMFLNFDQCGPPASLCQSISRPVPVRFH NYGDYFNVFFPLVVLNTFETVAQEWLNSPNRENFYQLQVRKFPADYIKYWEFAVYLEECE LAKQLYPKENDLVFLVPERINEEKKDAERNDIQDLHEYHSGYVHKFRRTSVMRNGKAECY LSIQTQENFPANLNELVNCIVINSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTKD LLTTTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLY CLLTENQRKGRSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKNKKNPLGNC GDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQAMHKRKEFLDYQLDELSRQR ALCRGGREIQRQELDENISKVSKERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTS GGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISM KAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLK TNRQTETIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKDVS FRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSVQGS IGFLASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALK ENQHWNQLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPVLQRSLTHPPTIAPEVSRPQGG LPSSKLDSGFAKTSFAASLYHTPSDSKETTLTVTSKDPERPPVHDQLRDPRLLKRMGIEV KGGIFLWDPQPSSPQHPGATPPAGEPSFPVVHQDLGHVQQPPAVVAALSSHKPPVQGEPP AASPEASTCQSKCDNPEEELCHRREARAFSEGQQEKCGSETPHTRRNSRWDKRRPEQEDS SSKKRKLL NT seq 8127 nt NT seq  +upstreamnt  +downstreamnt atgagcacatgttgttggtgtactccaggtggtggttccaccgttgacttcctaaagcgc tatgcttccaacactccatccagtgaatttcaaacagctgacgaagatctctgctactgc ttagagtgtgtggcagaataccacaaagcaagagatgaattgccgttcttgcatgaggtt ttatgggaattggaaaccttacgtctgataaatcactttgaaaaatccatgaaggcagaa attggagatgatgatgagttatatatagtagacaacaatggagagatgccactgtttgac atcactggacaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatat ccttatttgcttctacatgaacgtgttaacgagttatgtgttgaagcactttgtcggatg gaacaagccaattgctcctttcaggtgtttgacaaacatccagggatctatttgtttttg gtccatcccaatgatatggttcggcgttgggctatcttgactgcaagaaacttggggaaa gtggacagagatgattattatgacttacaagaagttttaatttgcctttttaaagtcatt gagttgggacttctagagagtccagacatttatacttcttctgtcctagagaagggtaaa ctaattcttctgccctcacacatgtatgatactaccaactacaaaagctattggttaggt atttgcatgttgctgaccattcttgaggaacaagccatggattccctattgttgggctca gacaaacaaaatgattttatgcaatcgatacttcacactatggagaggcaatcagatgat gatagtgtggatcctttctggccagcattacactgttttatggtgattctggaccgcctt ggatctaaggtctggggtcagcttattgatcctattgaggcatttcaaaccattatcaac aatgcaagctacaatagagagatccaacatatacggaacagctctgtaaggaccaagtta gaaccagagtcgtatttggatgatatggtgacttgcagccagatcgtttacaattataat cctgaaaagaccaaaaaggattctggatggagaacagccatttgcccagattattgtcct aacatgtatgaagaaatggaaacattagccagtgtgcttcagtcagatattggtcaagac atgcgtgttcataacagcacatttctgtggttcatcccttttgtccagtccctcatggat cttaaggatttgggtgtggcttacatagtagaggttgttcatcatctgtactctgaagtc aaagatgtcctcaaccaaacagatgccatgtgtgacaaagtcactgaattttttcttcta attttggtatcagtgattgaactgcatagaaataaaaaatgtttgcatttgttgtgggta agttcccagcaatgggtagaagctgtcgtcaaatgtgccaagcttcctaccactgcattt acacggagttctgagaaatcatctggaaattgctccaaaggaacagcaatgatatcatca ctgtcgttgcattccatgccatctaactctgtacaacttgcttgtgtgcagctgattaga agtctccttaaagaaggttatcagcttgggcagcaatctctttgcaagcgattctgggat aaactcaacttattccttagaggaaatttatctctaggttggcagttgactagtcaggaa acccacgagctacaaacttgtttaaagcaaattattagaaacataaaattcaaagcacct ccatgtaacacgtttgtggatctgacttctacatgtaaaacctctcctgcatcttataat aaagaagaaagtgaacaaatagggaagaagtctagaaaagatatgcattgtttggaagct tccagcccaacattttctaaagaacccatgaaagcgcaagacagtgtactgatcaaagca gataacactgtagaaggtgacaatgatgagcaaaactatataaaggatgtgaaactagaa gaccagctctcagctgggtcatgcttaaagcagagtagtgaaaacatttttactgaaaga gctgaagatgaaattaaaataagtacaaggaagcagaagtctgtaaaagagaattcctca tatacaccagaggattgtacttcaagaaatggtccagaaaggggatgtgacagaggaata atagtatcaacacgtttgttgactgattctagcactgatgctttggaaaaagtgtccaca tcaaatgaagatttctctttaaaggatgatgcttttgctaaaacctcaaaacaaaaaact aaggtacagaaagatgaaatctgtgcaaagttatcacatgtaataaagaagcaacacagg aagagtactttggtcaacaatactatcaatttagacgaaaatttgactgtatctaacatt gagcgtttctattcaaggaaagatacaggagttcagaaaggagatggtttcatacacaat ctttctttagaccctagtggtgttctggatgataataagaatggagaacaaaaatctcaa aacaatttattgccagaagagaagcaattaaagaatgaagagttagatattttctattcc catgaaaacaattgtgaaatacaggaatttcatgttgatgataaagattcgatccccttt acagaaatggccaatactttagagaagaaatcatcttcctttaaagatcttatgactgta cctgaatcaagagatgaggcgatgagtaatagtaccaatgtgatttattctaacttgaca agagaacaggcccctggcatcagccctaaatctgacaccttaacggattctcagatagac agagaccttcacaaattatctttactagctcaagccagtgttatcacgtttccatctgat tcccctcagaactcatcccagctacaaaggaaaggaaaagaagataaaagatgtttcaca gctaaccaaaataatgttggcgattgctcccgtggacaggtgattattatttcagattct gatgatgatgatgatgatgaaagaatcctgagtcttgagaaactcactaaagacaaaaga tgccttgagaaggaacgtccaaagcagcacatttcaacagtcaaggagaaaaagaatcca gtaaaggaagaaaagacgaagtctctttttcagtttgaggaatctgattctcagtgtttt gagtttgaaagtgcatctgaagtgttttccgtttggcaagatcatctagacaataataat tcagttcaagatggtgagaaaaaatgtttgactcctatagccaataccacaaatggtcag gattgtacagattatgtttctgaagttgttaaaaaaggggcagagggtattgaagaacac gcaagaccgcagagcagtcgtatttctgttgaggaattttgtgaaattgaagtaaaaaag cctaagagaaaacgatctgaaaaaccaattcctgaagatcctgtgaggccttcatcttct gtcggaaatgagggccagtctgatactaataagagagatcttattggaaatgattttaaa agtatagatagaaggactacaactcccaattcaagtattcagagagccactacggtttca caaaagaaatcttcaaagctttgtacttacatagaacccgtgaggaaagttccagtttct aagacctctaagaaaacccattcggatgccaaaaaaggacagaatagaagttcaaattac ctcagttgtaggacgactcctgctatagtgccaccaaagaaatttcgtcagtgtcctgaa ccaacttcaacagtggagaaacttggcctgaaaaagggtcctcgtagggcatttgagttg tcccagcgatctttggattatgtagctcagttacgtgatcatggcaaaactgttggagta gttgatactcgaaaaaagactaaattaatttctcctcagaacctgtctgtcagaaataat aagaaactgctgactagtcaagaacttcagatgcaaaggcagatcagacccaaatcacaa aaaaatagacaaagactttctgattgtgaaagtacagatactacaagagcagggcctcat acagcacagaattctgacttacttgtaccagaatctgataggtcagattatgattgtaca ggaggaactgaggtacttgccaacagtaatgaaaaacaattaataaaatgcatgccttct gaaccagaaaccataaaagcaaaacatgggtctccagcgactgatggtgcttgccctttg aaccaatgtgattctatagtgttaaatggaacaataccaacaagtgaagtaattgtctgt acttcagaggaccctctgggtggaggtgatccgacagcacatcatacagagatggcaact ttgaacgagggagagcctgactccagcagtgatatagaggaagataacttatttttaaca caaaatgatcctgaagatatggatttatgttcacaaatggagaatgacaattttaaattc attgaactaattcatggaaaagatacagttcaggttgaagaagattctgtaagtctgcct cagttggaatctttgagtggcacaaagtgtaagtacaaagattgtcttgaaaccacaaaa aaccagggtgaatactgcccacaacactctgaagtgaaagcagcagatgaagatgtattt cgtaaacctggtttgcctccttctgcatctaaacctttgagacctaccactgctaagatt tttagctcaaagagtacttcacgaattgctggtctttctaaatctttggaaacttcttca gcactttcaccatctctaaaaaataagtcaaaggggatacagtcaattttgaaagtacca cagccagctcccctcgtagctcagaagccagtgggtgaaatgaaaaattcgagcaatgtt cttcatcctcagtctccgaataattccaacaggcaaggttgcaaagttccatttgctgaa agcaaatattttccatcttcctctccagtaaacattctcttgtcatcacagtctgtctct gacaccttcgttaaagaggtcttaaaatggaaatatgaaatgtttttgaactttgatcag tgtgggccccctgcaagtctttgtcagtccatctcaagacctgtgcctgtcagatttcac aattatggagattattttaatgtttttttccctttggtggtattgaatacttttgaaaca gtggcgcaggaatggctcaactctccaaatagagagaatttctatcagttgcaagtacga aaatttcctgccgattatataaaatactgggagtttgcggtttatctggaagaatgtgaa ttggctaaacagctgtatccaaaggaaaacgatttggtgtttttagttcctgagagaata aatgaagagaagaaagatgcagagagaaatgacatacaagatcttcacgagtatcattct ggttatgttcataaatttcgccgcacttcagtcatgcgtaatgggaaagctgagtgttac ctttccatccagactcaagagaattttccggccaatttaaacgaacttgtgaattgtatt gtaatcaattctctggtaacgacacaaaggaagttgaaagccatgtctctgttgggtagt cggaaccaactggctagagctgttctgaatccaaaccctatggacttctgtacaaaagat ttactaactacaacatctgagagaattattgcttacttaagagatttcaatgaagaccaa aagaaagcaatagaaactgcatatgctatggtgaaacactcaccatcagttgccaaaatc tgcttgattcatggaccacctggaacaggaaaatcaaaaactattgttggcctcctctat tgtctactgacagagaaccagaggaaggggcgttcagacgaaaactccaatgccaaaatc aaacaaaaccgtgtcctcgtgtgtgcaccttccaatgcagctgttgatgaactcatgaaa aaaattatccttgaattcaaagaaaaatgtaaaaacaagaagaatcctttaggaaactgt ggagatataaatttagtacgactgggtccagaaaagtctattaataatgaggttctaaag ttcagtttggacagccaagtaaaccacagaatgaaaaaagatttaccttctcatgttcag gcgatgcataaaagaaaggaatttctagattatcagttggatgagctttcccggcagcga gctctatgccgaggtggacgggaaatacagaggcaagaattagatgaaaacatttccaaa gtttctaaggaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgcccacag aaaacacagagtatcatcatcttagagtcccatgtgatctgctgcacattgagcacgagt ggtggcttactacttgaatctgctttccgggggcaagggggtgtccccttcagctgtgtc attgttgatgaggctggacagtcttgtgaaattgagactcttaccccactcatccatcgc tgcaataagctcatcctagtaggagatcccaagcagctccctcccacagtcatctctatg aaagcacaggagtatggctacgaccagtcaatgatggctcgcttctgcagactgctggaa gagaatgtagaacacaacatgatcagcaggctgcctattctgcagctcactgtgcagtac aggatgcatccagacatatgcctcttcccttctaattatatttacaacagaaacttaaaa acaaatagacagacagaaaccattcgatgttcatcagactggccatttcaaccatacctt gtgtttgatgtcggagatggttcagaaagacgggataatgactcatacataaatgttcaa gaaataaaactggtgatggaaataattaagcttattaaagacaaaagaaaggatgttagt tttcgaaacattggtataataactcattacaaggcccagaagacaatgattcagaaggat ttggacaaagagttcgatagaaaaggaccagcagaagtagatactgtggatgcgttccag ggtcggcagaaggattgtgttattgttacatgtgtcagagcaaatagcgtgcaaggttca attggattcctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtacagc ctcttcatcctcggacatttgaggaccctgatgcaacttcttcctaggagcttttgtgta cacgtgaaccattcgccttttttcagcccagaacccaagtatctacactgggctctcaag gaaaaccagcattggaatcagctgattcaggatgctcagaagcgtggtgccattattaag acctgtgacaaaaactatagacatgatgcaatgaagattctgaaactcaagcccgtgcta cagagaagtctcactcaccctcctaccatagccccagaggtatccagaccccagggtggc ttgcccagcagcaagctagacagtggatttgccaagacatcttttgctgcttctctatac cacacaccctctgactccaaggaaactactcttactgttacttcaaaggaccctgaaaga cctcctgttcatgaccaacttcgggacccacgactgctgaagaggatgggcattgaggtc aaaggaggaatattcctatgggatccacaaccctcgagcccccagcatcctggagcaaca cctcctgcaggagagccgagcttccctgtcgttcaccaggacctgggccatgtacagcag cctcctgctgtagtggctgctctgagcagccacaaacctcccgtgcagggcgaacctcca gctgccagtcccgaggcttccacgtgtcagagcaaatgtgataacccagaagaggagctc tgtcacaggagagaggccagggctttcagtgaaggccagcaggagaagtgtggttccgag acccctcacaccaggaggaactctaggtgggacaagaggagaccggagcaggaggacagc agttccaagaaaagaaagcttttatag

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