Chlorocebus sabaeus (green monkey): 103240332
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Entry
103240332 CDS
T04361
Symbol
HBS1L
Name
(RefSeq) HBS1 like translational GTPase
KO
K14416
elongation factor 1 alpha-like protein
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03015
mRNA surveillance pathway
csab05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103240332 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
103240332 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103240332 (HBS1L)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103240332 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
103240332
NCBI-ProteinID:
XP_008005153
Ensembl:
ENSCSAG00000016791
LinkDB
All DBs
Position
13:38383405..38478569
Genome browser
AA seq
684 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSVEPVEEYDYED
LKESSNSVSNHQLSGFDQARLYSCLDHMREVLGDAVPDEILIEAVLKNKFDVQKALSGVL
EQDRVQNLKDKNEGTVSTRKMAKGKPVDSQTSRSESEIVPKVAKMTVSGKKQTMGFEVPG
VSSEENGHSFHTPQKEWPIEDAIASSDVLETASKSANPPLTVQASEEQSSTPAPVKKSGK
LRQQLDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAA
QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
ITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPP
QRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLQAMPPNETCTVKGITLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCVFCGPKEPIKACTRFRARILIFNIEIPITKGFPV
LLHYQTVSEPAVIKRLISILNKSTGEVTKKKPKFLTKGQNALVELQTQRPIALELYKDFK
ELGRFMLRYGGSTIAAGVVTEIKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgttcgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttattcacggcgtgacaaaccttccgttgagcctgtagaagaatatgattatgaagat
ctgaaagaatcttccaattctgtttcgaaccatcagctcagtggatttgatcaagctcgt
ctttattcgtgccttgatcacatgagagaggtacttggagatgctgtgccagatgaaata
ttaattgaagcagttttgaagaacaagtttgatgtgcagaaggctttgtcaggggttctg
gaacaagatagagtgcagaatttgaaggacaagaatgagggaacagtatctacaagaaag
atggcgaaaggaaaaccagtagattcccagacatcgcgaagtgaatctgaaattgtgcca
aaagttgctaaaatgactgtatctggaaagaagcaaactatgggatttgaagtgcctgga
gtatcttctgaagaaaatggtcatagtttccacacacctcaaaaagaatggcccattgaa
gatgccattgcttcttctgatgttcttgagactgcttctaaatctgctaatccacccctg
acggttcaagcatcagaagagcagagttcaaccccagcaccggtgaaaaagtctggcaag
ctgaggcagcaattagatgtgaaggcggaactggagaagcggcaaggagggaagcagctc
ctcaacttggtggtcattggtcatgttgatgctgggaaaagtactctgatgggccatatg
ctttatcttctgggtaatataaacaaaagaactatgcataagtatgaacaggagtctaaa
aaggctggcaaagcttcgtttgcctatgcatgggtcttggatgaaactggcgaagaaagg
gaaaggggagtaaccatggatgttggcatgacaaagtttgaaaccacaaccaaagttatt
acattaatggatgctccaggccataaggacttcattccaaatatgattacaggagcagcc
caggcggatgtagctgttttagttgtagatgccagcaggggagagtttgaagctggattt
gagactggaggacaaacacgagagcatggactcttggtccgttctctgggagtgacgcag
cttgctgttgcagttaataaaatggatcaggttaattggcaacaagaaagatttcaagag
attactggaaaacttgggcactttcttaagcaagcaggttttaaggagagtgatgtagct
tttattcctacaagtggtctcagtggtgaaaatctaatcacaagatctcagtcaagtgaa
ctcacaaaatggtataaaggactatgtttattagaacaaattgattcctttaagcctccc
cagcgatctattgacaagccttttagattatgtgtgtctgatgttttcaaagatcaagga
tctggattttgcataactggtaaaattgaagctggttatatccaaactggtgaccgacta
caggcaatgcctcctaatgaaacttgtaccgtaaaaggaatcactctgcatgatgaacct
gttgattgggcagcagcaggcgatcatgttagtcttactttggttgggatggatatcatc
aaaatcaatgttggctgcgtattttgtggccccaaagaacctattaaagcttgcactcgc
ttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggatttcctgtg
ctgttacactaccaaactgtcagtgaacccgctgttattaaacgattgattagtatctta
aacaaaagcacgggtgaagtcacaaagaagaagcctaagtttttgactaaaggccagaat
gcattggtagagctgcagacacaaagaccaatagctcttgagctatataaagactttaaa
gagctggggaggttcatgctacgttacggtggttctacaatagctgctggtgttgtcact
gagataaaagaatga
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